RNA–Protein interactions for RNA: ENST00000515593.1

HOXC10-205, Transcript of homeobox C10, humanhuman

TSL 4

Gene HOXC10, Length 526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10-205ENST00000515593 MYT1LQ9UL68 1186 aa13.42□□□□□ -0.26
HOXC10-205ENST00000515593 DMRT2Q9Y5R5 561 aa13.42□□□□□ -0.26
HOXC10-205ENST00000515593 CFAP74Q9C0B2 1584 aa13.41□□□□□ -0.26
HOXC10-205ENST00000515593 SCAPERQ9BY12 1400 aa13.41□□□□□ -0.26
HOXC10-205ENST00000515593 STRCQ7RTU9 1775 aa13.41□□□□□ -0.26
HOXC10-205ENST00000515593 PREX1Q8TCU6 1659 aa13.4□□□□□ -0.26
HOXC10-205ENST00000515593 ATP1B4Q9UN42 357 aaPredicted RBP13.4□□□□□ -0.26
HOXC10-205ENST00000515593 TTC37Q6PGP7 1564 aa13.4□□□□□ -0.26
HOXC10-205ENST00000515593 ZMYM4Q5VZL5 1548 aa13.39□□□□□ -0.27
HOXC10-205ENST00000515593 SPATA31D1Q6ZQQ2 1576 aa13.38□□□□□ -0.27
HOXC10-205ENST00000515593 ATP10AO60312 1499 aa13.37□□□□□ -0.27
HOXC10-205ENST00000515593 MAGI2Q86UL8 1455 aa13.37□□□□□ -0.27
HOXC10-205ENST00000515593 SETD1BQ9UPS6 1966 aaKnown RBP13.36□□□□□ -0.27
HOXC10-205ENST00000515593 ARHGEF12Q9NZN5 1544 aa13.35□□□□□ -0.27
HOXC10-205ENST00000515593 PLCH2O75038 1416 aa13.34□□□□□ -0.27
HOXC10-205ENST00000515593 C9orf84Q5VXU9 1444 aa13.34□□□□□ -0.27
HOXC10-205ENST00000515593 UHRF1BP1Q6BDS2 1440 aa13.34□□□□□ -0.27
HOXC10-205ENST00000515593 EFCAB2Q5VUJ9 269 aa13.34□□□□□ -0.27
HOXC10-205ENST00000515593 EHMT2Q96KQ7 1210 aa13.34□□□□□ -0.27
HOXC10-205ENST00000515593 CDK13Q14004 1512 aaKnown RBP13.34□□□□□ -0.27
HOXC10-205ENST00000515593 AFAP1Q8N556 730 aa13.33□□□□□ -0.28
HOXC10-205ENST00000515593 ESF1Q9H501 851 aaKnown RBP13.31□□□□□ -0.28
HOXC10-205ENST00000515593 PTPRTO14522 1441 aa13.29□□□□□ -0.28
HOXC10-205ENST00000515593 C3P01024 1663 aa13.28□□□□□ -0.28
HOXC10-205ENST00000515593 MYO5CQ9NQX4 1742 aa13.28□□□□□ -0.28
HOXC10-205ENST00000515593 LTBP4Q8N2S1 1624 aa13.28□□□□□ -0.28
HOXC10-205ENST00000515593 UBAP1LF5GYI3 381 aa13.26□□□□□ -0.29
HOXC10-205ENST00000515593 ARHGAP5Q13017 1502 aa13.24□□□□□ -0.29
HOXC10-205ENST00000515593 NCKAP5LQ9HCH0 1330 aa13.24□□□□□ -0.29
HOXC10-205ENST00000515593 KIF14Q15058 1648 aa13.24□□□□□ -0.29
HOXC10-205ENST00000515593 CDK11AQ9UQ88 783 aaPredicted RBP13.23□□□□□ -0.29
HOXC10-205ENST00000515593 ZNF518AQ6AHZ1 1483 aa13.23□□□□□ -0.29
HOXC10-205ENST00000515593 TRAPPC8Q9Y2L5 1435 aa13.22□□□□□ -0.29
HOXC10-205ENST00000515593 ZNF335Q9H4Z2 1342 aaPredicted RBP13.22□□□□□ -0.29
HOXC10-205ENST00000515593 DIP2CQ9Y2E4 1556 aa13.22□□□□□ -0.29
HOXC10-205ENST00000515593 ABCA6Q8N139 1617 aa13.21□□□□□ -0.3
HOXC10-205ENST00000515593 SCAF1Q9H7N4 1312 aaKnown RBP13.2□□□□□ -0.3
HOXC10-205ENST00000515593 UBTFP17480 764 aaKnown RBP13.2□□□□□ -0.3
HOXC10-205ENST00000515593 NCOA1Q15788 1441 aa13.2□□□□□ -0.3
HOXC10-205ENST00000515593 CAMSAP1Q5T5Y3 1602 aa13.2□□□□□ -0.3
HOXC10-205ENST00000515593 KDM5CP41229 1560 aa13.19□□□□□ -0.3
HOXC10-205ENST00000515593 CDC42BPBQ9Y5S2 1711 aa13.18□□□□□ -0.3
HOXC10-205ENST00000515593 IQSEC2Q5JU85 1478 aa13.17□□□□□ -0.3
HOXC10-205ENST00000515593 PIP4K2BP78356 416 aa13.16□□□□□ -0.3
HOXC10-205ENST00000515593 ZNF777Q9ULD5 760 aaPredicted RBP13.16□□□□□ -0.3
HOXC10-205ENST00000515593 MLH3Q9UHC1 1453 aa13.16□□□□□ -0.3
HOXC10-205ENST00000515593 TROQ12816 1431 aaPredicted RBP13.15□□□□□ -0.3
HOXC10-205ENST00000515593 ZMYM3Q14202 1370 aa13.15□□□□□ -0.3
HOXC10-205ENST00000515593 REREQ9P2R6 1566 aa13.15□□□□□ -0.3
HOXC10-205ENST00000515593 EEA1Q15075 1411 aa13.14□□□□□ -0.31
HOXC10-205ENST00000515593 SUPT6HQ7KZ85 1726 aaKnown RBP13.14□□□□□ -0.31
HOXC10-205ENST00000515593 HSPA1LP34931 641 aa13.14□□□□□ -0.31
HOXC10-205ENST00000515593 CLIP1P30622 1438 aa13.13□□□□□ -0.31
HOXC10-205ENST00000515593 FMN1Q68DA7 1419 aa13.13□□□□□ -0.31
HOXC10-205ENST00000515593 AGLP35573 1532 aa13.13□□□□□ -0.31
HOXC10-205ENST00000515593 LRRIQ1Q96JM4 1722 aa13.13□□□□□ -0.31
HOXC10-205ENST00000515593 KIDINS220Q9ULH0 1771 aa13.13□□□□□ -0.31
HOXC10-205ENST00000515593 SENP3Q9H4L4 574 aaPredicted RBP13.12□□□□□ -0.31
HOXC10-205ENST00000515593 CNTLNQ9NXG0 1405 aa13.12□□□□□ -0.31
HOXC10-205ENST00000515593 ITSN2Q9NZM3 1697 aa13.12□□□□□ -0.31
HOXC10-205ENST00000515593 PKD2Q13563 968 aa13.11□□□□□ -0.31
HOXC10-205ENST00000515593 GGT6Q6P531 493 aa13.11□□□□□ -0.31
HOXC10-205ENST00000515593 ARHGAP35Q9NRY4 1499 aa13.1□□□□□ -0.31
HOXC10-205ENST00000515593 CLTCQ00610 1675 aaKnown RBP13.1□□□□□ -0.31
HOXC10-205ENST00000515593 HNRNPMP52272 730 aaKnown RBP eCLIP13.1□□□□□ -0.31
HOXC10-205ENST00000515593 PPP6R1Q9UPN7 881 aa13.1□□□□□ -0.31
HOXC10-205ENST00000515593 ABCC1P33527 1531 aa13.09□□□□□ -0.31
HOXC10-205ENST00000515593 NPATQ14207 1427 aa13.08□□□□□ -0.32
HOXC10-205ENST00000515593 PHF23Q9BUL5 403 aaPredicted RBP13.08□□□□□ -0.32
HOXC10-205ENST00000515593 PREX2Q70Z35 1606 aa13.08□□□□□ -0.32
HOXC10-205ENST00000515593 TOM1O60784 492 aa13.07□□□□□ -0.32
HOXC10-205ENST00000515593 MROH2AA6NES4 1674 aa13.07□□□□□ -0.32
HOXC10-205ENST00000515593 SPAG9O60271 1321 aaKnown RBP13.07□□□□□ -0.32
HOXC10-205ENST00000515593 MED1Q15648 1581 aaPredicted RBP13.07□□□□□ -0.32
HOXC10-205ENST00000515593 CDC42BPAQ5VT25 1732 aa13.06□□□□□ -0.32
HOXC10-205ENST00000515593 MYO3AQ8NEV4 1616 aa13.05□□□□□ -0.32
HOXC10-205ENST00000515593 SAMD9LQ8IVG5 1584 aa13.04□□□□□ -0.32
HOXC10-205ENST00000515593 CEP170BQ9Y4F5 1589 aaPredicted RBP13.04□□□□□ -0.32
HOXC10-205ENST00000515593 PTPRKQ15262 1439 aa13.03□□□□□ -0.32
HOXC10-205ENST00000515593 PLA2R1Q13018 1463 aa13.03□□□□□ -0.32
HOXC10-205ENST00000515593 TCOF1Q13428 1488 aaKnown RBP13.03□□□□□ -0.32
HOXC10-205ENST00000515593 ZNF142P52746 1687 aaPredicted RBP13.02□□□□□ -0.33
HOXC10-205ENST00000515593 SYCP2Q9BX26 1530 aa13.01□□□□□ -0.33
HOXC10-205ENST00000515593 A2MP01023 1474 aa13□□□□□ -0.33
HOXC10-205ENST00000515593 FBXO31Q5XUX0 539 aaPredicted RBP13□□□□□ -0.33
HOXC10-205ENST00000515593 DNMT1P26358 1616 aaKnown RBP12.99□□□□□ -0.33
HOXC10-205ENST00000515593 ATP7AQ04656 1500 aa12.98□□□□□ -0.33
HOXC10-205ENST00000515593 CFDP1Q9UEE9 299 aaPredicted RBP12.98□□□□□ -0.33
HOXC10-205ENST00000515593 SHANK2Q9UPX8 1470 aa12.97□□□□□ -0.33
HOXC10-205ENST00000515593 GPATCH8Q9UKJ3 1502 aaKnown RBP12.97□□□□□ -0.33
HOXC10-205ENST00000515593 A2ML1A8K2U0 1454 aa12.97□□□□□ -0.33
HOXC10-205ENST00000515593 ANKLE2Q86XL3 938 aa12.96□□□□□ -0.33
HOXC10-205ENST00000515593 CCDC18Q5T9S5 1454 aa12.96□□□□□ -0.34
HOXC10-205ENST00000515593 POLR1AO95602 1720 aaPredicted RBP12.96□□□□□ -0.34
HOXC10-205ENST00000515593 CASKIN1Q8WXD9 1431 aa12.96□□□□□ -0.34
HOXC10-205ENST00000515593 CPS1P31327 1500 aa12.95□□□□□ -0.34
HOXC10-205ENST00000515593 LOC105371045A0A1W2PR82 267 aa12.95□□□□□ -0.34
HOXC10-205ENST00000515593 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.94□□□□□ -0.34
HOXC10-205ENST00000515593 ZNF644Q9H582 1327 aaPredicted RBP12.94□□□□□ -0.34
HOXC10-205ENST00000515593 KIF3BO15066 747 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms