RNA–Protein interactions for RNA: ENST00000515410.1

RAB3A-204, Transcript of RAB3A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB3A, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3A-204ENST00000515410 FER1L4A9Z1Z3 1794 aa22.35■■□□□ 1.17
RAB3A-204ENST00000515410 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.34■■□□□ 1.17
RAB3A-204ENST00000515410 DMRT2Q9Y5R5 561 aa22.33■■□□□ 1.17
RAB3A-204ENST00000515410 ARHGEF12Q9NZN5 1544 aa22.31■■□□□ 1.16
RAB3A-204ENST00000515410 HECW1Q76N89 1606 aa22.31■■□□□ 1.16
RAB3A-204ENST00000515410 PREX1Q8TCU6 1659 aa22.3■■□□□ 1.16
RAB3A-204ENST00000515410 SPATA31D1Q6ZQQ2 1576 aa22.29■■□□□ 1.16
RAB3A-204ENST00000515410 RANGAP1P46060 587 aaPredicted RBP22.28■■□□□ 1.16
RAB3A-204ENST00000515410 UBTFP17480 764 aaKnown RBP22.27■■□□□ 1.16
RAB3A-204ENST00000515410 SCAPERQ9BY12 1400 aa22.26■■□□□ 1.15
RAB3A-204ENST00000515410 ATP10AO60312 1499 aa22.26■■□□□ 1.15
RAB3A-204ENST00000515410 C9orf84Q5VXU9 1444 aa22.25■■□□□ 1.15
RAB3A-204ENST00000515410 CEBPAP49715 358 aaPredicted RBP22.25■■□□□ 1.15
RAB3A-204ENST00000515410 STRCQ7RTU9 1775 aa22.24■■□□□ 1.15
RAB3A-204ENST00000515410 UHRF1BP1Q6BDS2 1440 aa22.23■■□□□ 1.15
RAB3A-204ENST00000515410 PLCH2O75038 1416 aa22.22■■□□□ 1.15
RAB3A-204ENST00000515410 PTPRTO14522 1441 aa22.2■■□□□ 1.14
RAB3A-204ENST00000515410 EHMT2Q96KQ7 1210 aa22.18■■□□□ 1.14
RAB3A-204ENST00000515410 EFCAB2Q5VUJ9 269 aa22.13■■□□□ 1.13
RAB3A-204ENST00000515410 IQSEC2Q5JU85 1478 aa22.13■■□□□ 1.13
RAB3A-204ENST00000515410 ARHGAP35Q9NRY4 1499 aa22.13■■□□□ 1.13
RAB3A-204ENST00000515410 CDK13Q14004 1512 aaKnown RBP22.12■■□□□ 1.13
RAB3A-204ENST00000515410 LTBP4Q8N2S1 1624 aa22.12■■□□□ 1.13
RAB3A-204ENST00000515410 ZNF518AQ6AHZ1 1483 aa22.1■■□□□ 1.13
RAB3A-204ENST00000515410 FMN1Q68DA7 1419 aa22.1■■□□□ 1.13
RAB3A-204ENST00000515410 SETD1BQ9UPS6 1966 aaKnown RBP22.1■■□□□ 1.13
RAB3A-204ENST00000515410 KDM5CP41229 1560 aa22.07■■□□□ 1.12
RAB3A-204ENST00000515410 REREQ9P2R6 1566 aa22.04■■□□□ 1.12
RAB3A-204ENST00000515410 AFAP1Q8N556 730 aa22.04■■□□□ 1.12
RAB3A-204ENST00000515410 NCOA1Q15788 1441 aa22.04■■□□□ 1.12
RAB3A-204ENST00000515410 MYO5CQ9NQX4 1742 aa22.03■■□□□ 1.12
RAB3A-204ENST00000515410 TRAPPC8Q9Y2L5 1435 aa22.03■■□□□ 1.12
RAB3A-204ENST00000515410 DIP2CQ9Y2E4 1556 aa22.03■■□□□ 1.12
RAB3A-204ENST00000515410 C3P01024 1663 aa22.02■■□□□ 1.12
RAB3A-204ENST00000515410 ESF1Q9H501 851 aaKnown RBP22■■□□□ 1.11
RAB3A-204ENST00000515410 MYT1LQ9UL68 1186 aa22■■□□□ 1.11
RAB3A-204ENST00000515410 AGLP35573 1532 aa21.98■■□□□ 1.11
RAB3A-204ENST00000515410 ARHGAP5Q13017 1502 aa21.98■■□□□ 1.11
RAB3A-204ENST00000515410 CDK11AQ9UQ88 783 aaPredicted RBP21.98■■□□□ 1.11
RAB3A-204ENST00000515410 MLH3Q9UHC1 1453 aa21.97■■□□□ 1.11
RAB3A-204ENST00000515410 KIF14Q15058 1648 aa21.95■■□□□ 1.1
RAB3A-204ENST00000515410 ABCA6Q8N139 1617 aa21.95■■□□□ 1.1
RAB3A-204ENST00000515410 ATP1B4Q9UN42 357 aaPredicted RBP21.95■■□□□ 1.1
RAB3A-204ENST00000515410 CNTLNQ9NXG0 1405 aa21.95■■□□□ 1.1
RAB3A-204ENST00000515410 TROQ12816 1431 aaPredicted RBP21.92■■□□□ 1.1
RAB3A-204ENST00000515410 UBAP1LF5GYI3 381 aa21.92■■□□□ 1.1
RAB3A-204ENST00000515410 CAMSAP1Q5T5Y3 1602 aa21.91■■□□□ 1.1
RAB3A-204ENST00000515410 NPATQ14207 1427 aa21.9■■□□□ 1.1
RAB3A-204ENST00000515410 CLIP1P30622 1438 aa21.89■■□□□ 1.1
RAB3A-204ENST00000515410 CASKIN1Q8WXD9 1431 aa21.89■■□□□ 1.1
RAB3A-204ENST00000515410 ZNF335Q9H4Z2 1342 aaPredicted RBP21.89■■□□□ 1.1
RAB3A-204ENST00000515410 LRRIQ1Q96JM4 1722 aa21.87■■□□□ 1.09
RAB3A-204ENST00000515410 NCKAP5LQ9HCH0 1330 aa21.85■■□□□ 1.09
RAB3A-204ENST00000515410 ABCC1P33527 1531 aa21.85■■□□□ 1.09
RAB3A-204ENST00000515410 CCDC18Q5T9S5 1454 aa21.83■■□□□ 1.08
RAB3A-204ENST00000515410 PKD2Q13563 968 aa21.82■■□□□ 1.08
RAB3A-204ENST00000515410 ZMYM3Q14202 1370 aa21.82■■□□□ 1.08
RAB3A-204ENST00000515410 PLA2R1Q13018 1463 aa21.82■■□□□ 1.08
RAB3A-204ENST00000515410 MROH2AA6NES4 1674 aa21.82■■□□□ 1.08
RAB3A-204ENST00000515410 CDC42BPBQ9Y5S2 1711 aa21.81■■□□□ 1.08
RAB3A-204ENST00000515410 FYCO1Q9BQS8 1478 aa21.81■■□□□ 1.08
RAB3A-204ENST00000515410 KIDINS220Q9ULH0 1771 aa21.8■■□□□ 1.08
RAB3A-204ENST00000515410 PREX2Q70Z35 1606 aa21.79■■□□□ 1.08
RAB3A-204ENST00000515410 TCOF1Q13428 1488 aaKnown RBP21.78■■□□□ 1.08
RAB3A-204ENST00000515410 ITSN2Q9NZM3 1697 aa21.78■■□□□ 1.08
RAB3A-204ENST00000515410 MED1Q15648 1581 aaPredicted RBP21.76■■□□□ 1.07
RAB3A-204ENST00000515410 ZNF142P52746 1687 aaPredicted RBP21.75■■□□□ 1.07
RAB3A-204ENST00000515410 MYO3AQ8NEV4 1616 aa21.73■■□□□ 1.07
RAB3A-204ENST00000515410 HSPA1LP34931 641 aa21.73■■□□□ 1.07
RAB3A-204ENST00000515410 PPP6R1Q9UPN7 881 aa21.73■■□□□ 1.07
RAB3A-204ENST00000515410 CEP170BQ9Y4F5 1589 aaPredicted RBP21.73■■□□□ 1.07
RAB3A-204ENST00000515410 PTPRKQ15262 1439 aa21.72■■□□□ 1.07
RAB3A-204ENST00000515410 SAMD9LQ8IVG5 1584 aa21.71■■□□□ 1.07
RAB3A-204ENST00000515410 CEP162Q5TB80 1403 aa21.71■■□□□ 1.07
RAB3A-204ENST00000515410 SCAF1Q9H7N4 1312 aaKnown RBP21.69■■□□□ 1.06
RAB3A-204ENST00000515410 SPAG9O60271 1321 aaKnown RBP21.68■■□□□ 1.06
RAB3A-204ENST00000515410 TOM1O60784 492 aa21.67■■□□□ 1.06
RAB3A-204ENST00000515410 PIP4K2BP78356 416 aa21.67■■□□□ 1.06
RAB3A-204ENST00000515410 CLTCQ00610 1675 aaKnown RBP21.66■■□□□ 1.06
RAB3A-204ENST00000515410 PLXNC1O60486 1568 aa21.65■■□□□ 1.06
RAB3A-204ENST00000515410 SUPT6HQ7KZ85 1726 aaKnown RBP21.64■■□□□ 1.06
RAB3A-204ENST00000515410 LOC105371045A0A1W2PR82 267 aa21.64■■□□□ 1.05
RAB3A-204ENST00000515410 CPS1P31327 1500 aa21.64■■□□□ 1.05
RAB3A-204ENST00000515410 SYCP2Q9BX26 1530 aa21.64■■□□□ 1.05
RAB3A-204ENST00000515410 ZNF777Q9ULD5 760 aaPredicted RBP21.63■■□□□ 1.05
RAB3A-204ENST00000515410 A2MP01023 1474 aa21.63■■□□□ 1.05
RAB3A-204ENST00000515410 CDC42BPAQ5VT25 1732 aa21.63■■□□□ 1.05
RAB3A-204ENST00000515410 ATP7AQ04656 1500 aa21.62■■□□□ 1.05
RAB3A-204ENST00000515410 A2ML1A8K2U0 1454 aa21.62■■□□□ 1.05
RAB3A-204ENST00000515410 PHF23Q9BUL5 403 aaPredicted RBP21.61■■□□□ 1.05
RAB3A-204ENST00000515410 GGT6Q6P531 493 aa21.6■■□□□ 1.05
RAB3A-204ENST00000515410 SHANK2Q9UPX8 1470 aa21.59■■□□□ 1.05
RAB3A-204ENST00000515410 HNRNPMP52272 730 aaKnown RBP eCLIP21.59■■□□□ 1.05
RAB3A-204ENST00000515410 INO80Q9ULG1 1556 aaPredicted RBP21.58■■□□□ 1.05
RAB3A-204ENST00000515410 DNMT1P26358 1616 aaKnown RBP21.58■■□□□ 1.04
RAB3A-204ENST00000515410 KIAA1107Q9UPP5 1409 aa21.57■■□□□ 1.04
RAB3A-204ENST00000515410 GPATCH8Q9UKJ3 1502 aaKnown RBP21.57■■□□□ 1.04
RAB3A-204ENST00000515410 MTUS2Q5JR59 1369 aa21.56■■□□□ 1.04
RAB3A-204ENST00000515410 PLEKHH2Q8IVE3 1493 aa21.55■■□□□ 1.04
RAB3A-204ENST00000515410 NEURL4Q96JN8 1562 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms