RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 HECW1Q76N89 1606 aa20.24■□□□□ 0.83
CSF1R-208ENST00000515239 STRCQ7RTU9 1775 aa20.24■□□□□ 0.83
CSF1R-208ENST00000515239 CFAP74Q9C0B2 1584 aa20.23■□□□□ 0.83
CSF1R-208ENST00000515239 ARHGEF12Q9NZN5 1544 aa20.22■□□□□ 0.83
CSF1R-208ENST00000515239 PREX1Q8TCU6 1659 aa20.22■□□□□ 0.83
CSF1R-208ENST00000515239 SCAPERQ9BY12 1400 aa20.2■□□□□ 0.82
CSF1R-208ENST00000515239 ATP10AO60312 1499 aa20.2■□□□□ 0.82
CSF1R-208ENST00000515239 SPATA31D1Q6ZQQ2 1576 aa20.19■□□□□ 0.82
CSF1R-208ENST00000515239 RANGAP1P46060 587 aaPredicted RBP20.16■□□□□ 0.82
CSF1R-208ENST00000515239 CSRNP3Q8WYN3 585 aa20.15■□□□□ 0.82
CSF1R-208ENST00000515239 PLCH2O75038 1416 aa20.15■□□□□ 0.82
CSF1R-208ENST00000515239 SETD1BQ9UPS6 1966 aaKnown RBP20.14■□□□□ 0.81
CSF1R-208ENST00000515239 PTPRTO14522 1441 aa20.14■□□□□ 0.81
CSF1R-208ENST00000515239 C9orf84Q5VXU9 1444 aa20.14■□□□□ 0.81
CSF1R-208ENST00000515239 UHRF1BP1Q6BDS2 1440 aa20.14■□□□□ 0.81
CSF1R-208ENST00000515239 LTBP4Q8N2S1 1624 aa20.11■□□□□ 0.81
CSF1R-208ENST00000515239 EFCAB2Q5VUJ9 269 aa20.08■□□□□ 0.81
CSF1R-208ENST00000515239 AFAP1Q8N556 730 aa20.05■□□□□ 0.8
CSF1R-208ENST00000515239 IQSEC2Q5JU85 1478 aa20.05■□□□□ 0.8
CSF1R-208ENST00000515239 CDK13Q14004 1512 aaKnown RBP20.03■□□□□ 0.8
CSF1R-208ENST00000515239 ZNF518AQ6AHZ1 1483 aa20■□□□□ 0.79
CSF1R-208ENST00000515239 TRAPPC8Q9Y2L5 1435 aa20■□□□□ 0.79
CSF1R-208ENST00000515239 C3P01024 1663 aa19.99■□□□□ 0.79
CSF1R-208ENST00000515239 NCOA1Q15788 1441 aa19.98■□□□□ 0.79
CSF1R-208ENST00000515239 KDM5CP41229 1560 aa19.97■□□□□ 0.79
CSF1R-208ENST00000515239 MYT1LQ9UL68 1186 aa19.96■□□□□ 0.79
CSF1R-208ENST00000515239 MYO5CQ9NQX4 1742 aa19.95■□□□□ 0.78
CSF1R-208ENST00000515239 REREQ9P2R6 1566 aa19.95■□□□□ 0.78
CSF1R-208ENST00000515239 DIP2CQ9Y2E4 1556 aa19.95■□□□□ 0.78
CSF1R-208ENST00000515239 ESF1Q9H501 851 aaKnown RBP19.94■□□□□ 0.78
CSF1R-208ENST00000515239 UBAP1LF5GYI3 381 aa19.93■□□□□ 0.78
CSF1R-208ENST00000515239 MLH3Q9UHC1 1453 aa19.92■□□□□ 0.78
CSF1R-208ENST00000515239 ATP1B4Q9UN42 357 aaPredicted RBP19.91■□□□□ 0.78
CSF1R-208ENST00000515239 CDK11AQ9UQ88 783 aaPredicted RBP19.91■□□□□ 0.78
CSF1R-208ENST00000515239 ZNF335Q9H4Z2 1342 aaPredicted RBP19.91■□□□□ 0.78
CSF1R-208ENST00000515239 AGLP35573 1532 aa19.91■□□□□ 0.78
CSF1R-208ENST00000515239 NCKAP5LQ9HCH0 1330 aa19.9■□□□□ 0.78
CSF1R-208ENST00000515239 ARHGAP5Q13017 1502 aa19.89■□□□□ 0.77
CSF1R-208ENST00000515239 KIF14Q15058 1648 aa19.89■□□□□ 0.77
CSF1R-208ENST00000515239 CAMSAP1Q5T5Y3 1602 aa19.88■□□□□ 0.77
CSF1R-208ENST00000515239 ABCA6Q8N139 1617 aa19.88■□□□□ 0.77
CSF1R-208ENST00000515239 CNTLNQ9NXG0 1405 aa19.86■□□□□ 0.77
CSF1R-208ENST00000515239 TROQ12816 1431 aaPredicted RBP19.85■□□□□ 0.77
CSF1R-208ENST00000515239 NPATQ14207 1427 aa19.85■□□□□ 0.77
CSF1R-208ENST00000515239 EEA1Q15075 1411 aa19.85■□□□□ 0.77
CSF1R-208ENST00000515239 ZMYM3Q14202 1370 aa19.83■□□□□ 0.76
CSF1R-208ENST00000515239 PKD2Q13563 968 aa19.81■□□□□ 0.76
CSF1R-208ENST00000515239 FMN1Q68DA7 1419 aa19.81■□□□□ 0.76
CSF1R-208ENST00000515239 CDC42BPBQ9Y5S2 1711 aa19.8■□□□□ 0.76
CSF1R-208ENST00000515239 HSPA1LP34931 641 aa19.79■□□□□ 0.76
CSF1R-208ENST00000515239 KIDINS220Q9ULH0 1771 aa19.78■□□□□ 0.76
CSF1R-208ENST00000515239 CLIP1P30622 1438 aa19.77■□□□□ 0.76
CSF1R-208ENST00000515239 PLA2R1Q13018 1463 aa19.76■□□□□ 0.75
CSF1R-208ENST00000515239 ABCC1P33527 1531 aa19.76■□□□□ 0.75
CSF1R-208ENST00000515239 MROH2AA6NES4 1674 aa19.75■□□□□ 0.75
CSF1R-208ENST00000515239 TCOF1Q13428 1488 aaKnown RBP19.75■□□□□ 0.75
CSF1R-208ENST00000515239 MED1Q15648 1581 aaPredicted RBP19.74■□□□□ 0.75
CSF1R-208ENST00000515239 ARHGAP35Q9NRY4 1499 aa19.73■□□□□ 0.75
CSF1R-208ENST00000515239 ITSN2Q9NZM3 1697 aa19.72■□□□□ 0.75
CSF1R-208ENST00000515239 PIP4K2BP78356 416 aa19.72■□□□□ 0.75
CSF1R-208ENST00000515239 PPP6R1Q9UPN7 881 aa19.72■□□□□ 0.75
CSF1R-208ENST00000515239 PREX2Q70Z35 1606 aa19.7■□□□□ 0.74
CSF1R-208ENST00000515239 SCAF1Q9H7N4 1312 aaKnown RBP19.7■□□□□ 0.74
CSF1R-208ENST00000515239 PTPRKQ15262 1439 aa19.69■□□□□ 0.74
CSF1R-208ENST00000515239 LRRIQ1Q96JM4 1722 aa19.69■□□□□ 0.74
CSF1R-208ENST00000515239 TOM1O60784 492 aa19.69■□□□□ 0.74
CSF1R-208ENST00000515239 UBTFP17480 764 aaKnown RBP19.69■□□□□ 0.74
CSF1R-208ENST00000515239 ZNF142P52746 1687 aaPredicted RBP19.68■□□□□ 0.74
CSF1R-208ENST00000515239 CEP170BQ9Y4F5 1589 aaPredicted RBP19.68■□□□□ 0.74
CSF1R-208ENST00000515239 SAMD9LQ8IVG5 1584 aa19.67■□□□□ 0.74
CSF1R-208ENST00000515239 MYO3AQ8NEV4 1616 aa19.67■□□□□ 0.74
CSF1R-208ENST00000515239 EHMT2Q96KQ7 1210 aa19.67■□□□□ 0.74
CSF1R-208ENST00000515239 SPAG9O60271 1321 aaKnown RBP19.66■□□□□ 0.74
CSF1R-208ENST00000515239 CLTCQ00610 1675 aaKnown RBP19.65■□□□□ 0.74
CSF1R-208ENST00000515239 HNRNPMP52272 730 aaKnown RBP eCLIP19.65■□□□□ 0.74
CSF1R-208ENST00000515239 SUPT6HQ7KZ85 1726 aaKnown RBP19.65■□□□□ 0.74
CSF1R-208ENST00000515239 ZNF777Q9ULD5 760 aaPredicted RBP19.64■□□□□ 0.73
CSF1R-208ENST00000515239 GGT6Q6P531 493 aa19.63■□□□□ 0.73
CSF1R-208ENST00000515239 PHF23Q9BUL5 403 aaPredicted RBP19.61■□□□□ 0.73
CSF1R-208ENST00000515239 CDC42BPAQ5VT25 1732 aa19.61■□□□□ 0.73
CSF1R-208ENST00000515239 CPS1P31327 1500 aa19.6■□□□□ 0.73
CSF1R-208ENST00000515239 SHANK2Q9UPX8 1470 aa19.6■□□□□ 0.73
CSF1R-208ENST00000515239 A2ML1A8K2U0 1454 aa19.59■□□□□ 0.73
CSF1R-208ENST00000515239 A2MP01023 1474 aa19.59■□□□□ 0.73
CSF1R-208ENST00000515239 DNMT1P26358 1616 aaKnown RBP19.58■□□□□ 0.73
CSF1R-208ENST00000515239 PLXNC1O60486 1568 aa19.58■□□□□ 0.73
CSF1R-208ENST00000515239 SYCP2Q9BX26 1530 aa19.57■□□□□ 0.72
CSF1R-208ENST00000515239 ATP7AQ04656 1500 aa19.56■□□□□ 0.72
CSF1R-208ENST00000515239 CASKIN1Q8WXD9 1431 aa19.55■□□□□ 0.72
CSF1R-208ENST00000515239 GPATCH8Q9UKJ3 1502 aaKnown RBP19.55■□□□□ 0.72
CSF1R-208ENST00000515239 ALKQ9UM73 1620 aa19.54■□□□□ 0.72
CSF1R-208ENST00000515239 CCDC18Q5T9S5 1454 aa19.54■□□□□ 0.72
CSF1R-208ENST00000515239 NEURL4Q96JN8 1562 aa19.54■□□□□ 0.72
CSF1R-208ENST00000515239 KIAA1107Q9UPP5 1409 aa19.54■□□□□ 0.72
CSF1R-208ENST00000515239 FBXO31Q5XUX0 539 aaPredicted RBP19.53■□□□□ 0.72
CSF1R-208ENST00000515239 INO80Q9ULG1 1556 aaPredicted RBP19.52■□□□□ 0.71
CSF1R-208ENST00000515239 ANKLE2Q86XL3 938 aa19.51■□□□□ 0.71
CSF1R-208ENST00000515239 RGS17Q9UGC6 210 aaPredicted RBP19.5■□□□□ 0.71
CSF1R-208ENST00000515239 VWDEQ8N2E2 1590 aa19.49■□□□□ 0.71
CSF1R-208ENST00000515239 CFDP1Q9UEE9 299 aaPredicted RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms