RNA–Protein interactions for RNA: ENST00000514654.5

ATP2C1-222, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2C1, Length 4,730 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-222ENST00000514654 ROCK2O75116 1388 aaKnown RBP8.07□□□□□ -1.12
ATP2C1-222ENST00000514654 RGS3P49796 1198 aa8.07□□□□□ -1.12
ATP2C1-222ENST00000514654 HAP1P54257 671 aaPredicted RBP8.07□□□□□ -1.12
ATP2C1-222ENST00000514654 MORC1Q86VD1 984 aa8.07□□□□□ -1.12
ATP2C1-222ENST00000514654 CCER2I3L3R5 266 aa8.07□□□□□ -1.12
ATP2C1-222ENST00000514654 SPAG9O60271 1321 aaKnown RBP8.07□□□□□ -1.12
ATP2C1-222ENST00000514654 FTSJ3Q8IY81 847 aaKnown RBP8.07□□□□□ -1.12
ATP2C1-222ENST00000514654 ZNF644Q9H582 1327 aaPredicted RBP8.07□□□□□ -1.12
ATP2C1-222ENST00000514654 PPP4R2Q9NY27 417 aa8.06□□□□□ -1.12
ATP2C1-222ENST00000514654 NCAPD3P42695 1498 aa8.06□□□□□ -1.12
ATP2C1-222ENST00000514654 AQRO60306 1485 aaKnown RBP eCLIP8.06□□□□□ -1.123e-7■■■■■ 38.5
ATP2C1-222ENST00000514654 CCDC18Q5T9S5 1454 aa8.05□□□□□ -1.12
ATP2C1-222ENST00000514654 GAPVD1Q14C86 1478 aa8.05□□□□□ -1.12
ATP2C1-222ENST00000514654 PTPRGP23470 1445 aa8.05□□□□□ -1.12
ATP2C1-222ENST00000514654 CYB5RLQ6IPT4 315 aa8.04□□□□□ -1.12
ATP2C1-222ENST00000514654 WASHC2CQ9Y4E1 1318 aa8.03□□□□□ -1.12
ATP2C1-222ENST00000514654 ST20-MTHFSA0A0A6YYL1 179 aa8.03□□□□□ -1.12
ATP2C1-222ENST00000514654 NESP48681 1621 aa8.02□□□□□ -1.12
ATP2C1-222ENST00000514654 KTN1Q86UP2 1357 aaKnown RBP8.02□□□□□ -1.13
ATP2C1-222ENST00000514654 RSPH4AQ5TD94 716 aa8.02□□□□□ -1.13
ATP2C1-222ENST00000514654 PHLDB1Q86UU1 1377 aa8.01□□□□□ -1.13
ATP2C1-222ENST00000514654 TRAK1Q9UPV9 953 aa8.01□□□□□ -1.13
ATP2C1-222ENST00000514654 U2AF1L5P0DN76 240 aaPredicted RBP8.01□□□□□ -1.13
ATP2C1-222ENST00000514654 U2AF1Q01081 240 aaKnown RBP eCLIP8.01□□□□□ -1.13
ATP2C1-222ENST00000514654 HDGFP51858 240 aaKnown RBP8.01□□□□□ -1.13
ATP2C1-222ENST00000514654 NUTM2FA1L443 756 aa8□□□□□ -1.13
ATP2C1-222ENST00000514654 DNAJC5BQ9UF47 199 aa8□□□□□ -1.13
ATP2C1-222ENST00000514654 KIF21BO75037 1637 aa8□□□□□ -1.13
ATP2C1-222ENST00000514654 CCDC146Q8IYE0 955 aa7.99□□□□□ -1.13
ATP2C1-222ENST00000514654 ANP32BQ92688 251 aaKnown RBP7.99□□□□□ -1.13
ATP2C1-222ENST00000514654 HDGFL2Q7Z4V5 671 aaPredicted RBP7.98□□□□□ -1.13
ATP2C1-222ENST00000514654 SYNJ1O43426 1573 aa7.98□□□□□ -1.13
ATP2C1-222ENST00000514654 PAK3O75914 559 aaPredicted RBP7.98□□□□□ -1.13
ATP2C1-222ENST00000514654 RALBP1Q15311 655 aa7.98□□□□□ -1.13
ATP2C1-222ENST00000514654 ARAP1Q96P48 1450 aa7.98□□□□□ -1.13
ATP2C1-222ENST00000514654 OSCARQ8IYS5 282 aa7.97□□□□□ -1.13
ATP2C1-222ENST00000514654 CFTRP13569 1480 aa7.97□□□□□ -1.13
ATP2C1-222ENST00000514654 PANK3Q9H999 370 aa7.97□□□□□ -1.13
ATP2C1-222ENST00000514654 RCAN3Q9UKA8 241 aa7.97□□□□□ -1.13
ATP2C1-222ENST00000514654 BECN1Q14457 450 aa7.97□□□□□ -1.13
ATP2C1-222ENST00000514654 CCDC144AA2RUR9 1427 aa7.96□□□□□ -1.13
ATP2C1-222ENST00000514654 FGD6Q6ZV73 1430 aa7.96□□□□□ -1.13
ATP2C1-222ENST00000514654 TPRNQ4KMQ1 711 aa7.96□□□□□ -1.14
ATP2C1-222ENST00000514654 DDRGK1Q96HY6 314 aa7.96□□□□□ -1.14
ATP2C1-222ENST00000514654 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.95□□□□□ -1.14
ATP2C1-222ENST00000514654 EIF5BO60841 1220 aaKnown RBP7.95□□□□□ -1.14
ATP2C1-222ENST00000514654 NLRP13Q86W25 1043 aa7.95□□□□□ -1.14
ATP2C1-222ENST00000514654 PNNQ9H307 717 aaKnown RBP7.95□□□□□ -1.14
ATP2C1-222ENST00000514654 LRRC9Q6ZRR7 1453 aa7.94□□□□□ -1.14
ATP2C1-222ENST00000514654 APBB1O00213 710 aa7.94□□□□□ -1.14
ATP2C1-222ENST00000514654 PRKRIP1Q9H875 184 aaPredicted RBP7.94□□□□□ -1.14
ATP2C1-222ENST00000514654 MYOM3Q5VTT5 1437 aa7.94□□□□□ -1.14
ATP2C1-222ENST00000514654 RRP7AQ9Y3A4 280 aaKnown RBP7.94□□□□□ -1.14
ATP2C1-222ENST00000514654 AFAP1Q8N556 730 aa7.94□□□□□ -1.14
ATP2C1-222ENST00000514654 USP47Q96K76 1375 aa7.93□□□□□ -1.14
ATP2C1-222ENST00000514654 CLUAP1Q96AJ1 413 aa7.93□□□□□ -1.14
ATP2C1-222ENST00000514654 OS9Q13438 667 aaPredicted RBP7.93□□□□□ -1.14
ATP2C1-222ENST00000514654 RBM19Q9Y4C8 960 aaKnown RBP7.93□□□□□ -1.14
ATP2C1-222ENST00000514654 RTF1Q92541 710 aaKnown RBP7.92□□□□□ -1.14
ATP2C1-222ENST00000514654 TERF2IPQ9NYB0 399 aa7.92□□□□□ -1.14
ATP2C1-222ENST00000514654 EIF3AQ14152 1382 aaKnown RBP7.92□□□□□ -1.14
ATP2C1-222ENST00000514654 MS4A1P11836 297 aa7.92□□□□□ -1.14
ATP2C1-222ENST00000514654 NCLP19338 710 aaKnown RBP7.92□□□□□ -1.14
ATP2C1-222ENST00000514654 KIF15Q9NS87 1388 aa7.92□□□□□ -1.14
ATP2C1-222ENST00000514654 NCOA2Q15596 1464 aa7.91□□□□□ -1.14
ATP2C1-222ENST00000514654 CUX1P39880 1505 aa7.91□□□□□ -1.14
ATP2C1-222ENST00000514654 CASKIN1Q8WXD9 1431 aa7.91□□□□□ -1.14
ATP2C1-222ENST00000514654 MINK1Q8N4C8 1332 aaPredicted RBP7.91□□□□□ -1.14
ATP2C1-222ENST00000514654 GOLGA2Q08379 1002 aa7.91□□□□□ -1.14
ATP2C1-222ENST00000514654 TAOK2Q9UL54 1235 aa7.91□□□□□ -1.14
ATP2C1-222ENST00000514654 PRXQ9BXM0 1461 aa7.91□□□□□ -1.14
ATP2C1-222ENST00000514654 NGDNQ8NEJ9 315 aaKnown RBP7.91□□□□□ -1.14
ATP2C1-222ENST00000514654 LTV1Q96GA3 475 aaPredicted RBP7.91□□□□□ -1.14
ATP2C1-222ENST00000514654 ANP32EQ9BTT0 268 aa7.91□□□□□ -1.14
ATP2C1-222ENST00000514654 FAM69CQ0P6D2 419 aa7.9□□□□□ -1.14
ATP2C1-222ENST00000514654 GRIN2BQ13224 1484 aa7.9□□□□□ -1.14
ATP2C1-222ENST00000514654 SPRYD3Q8NCJ5 442 aa7.9□□□□□ -1.14
ATP2C1-222ENST00000514654 NOP58Q9Y2X3 529 aaKnown RBP7.9□□□□□ -1.14
ATP2C1-222ENST00000514654 EID1Q9Y6B2 187 aa7.9□□□□□ -1.14
ATP2C1-222ENST00000514654 CC2D2AQ9P2K1 1620 aa7.9□□□□□ -1.14
ATP2C1-222ENST00000514654 CASC1Q6TDU7 716 aa7.9□□□□□ -1.15
ATP2C1-222ENST00000514654 ITPRIPQ8IWB1 547 aa7.9□□□□□ -1.15
ATP2C1-222ENST00000514654 POLA1P09884 1462 aaPredicted RBP7.9□□□□□ -1.15
ATP2C1-222ENST00000514654 PLIN1O60240 522 aa7.89□□□□□ -1.15
ATP2C1-222ENST00000514654 TOPBP1Q92547 1522 aa7.89□□□□□ -1.15
ATP2C1-222ENST00000514654 MYBBP1AQ9BQG0 1328 aaKnown RBP7.89□□□□□ -1.15
ATP2C1-222ENST00000514654 VGFO15240 615 aaPredicted RBP7.89□□□□□ -1.15
ATP2C1-222ENST00000514654 CSB-PGBD3P0DP91 1061 aa7.89□□□□□ -1.15
ATP2C1-222ENST00000514654 BCL2L13Q9BXK5 485 aa7.89□□□□□ -1.15
ATP2C1-222ENST00000514654 CHMP4BQ9H444 224 aaKnown RBP7.88□□□□□ -1.15
ATP2C1-222ENST00000514654 ANKRD50Q9ULJ7 1429 aa7.88□□□□□ -1.15
ATP2C1-222ENST00000514654 SMC4Q9NTJ3 1288 aa7.88□□□□□ -1.15
ATP2C1-222ENST00000514654 UACAQ9BZF9 1416 aa7.88□□□□□ -1.15
ATP2C1-222ENST00000514654 ELL2O00472 640 aaPredicted RBP7.88□□□□□ -1.15
ATP2C1-222ENST00000514654 PRDM2Q13029 1718 aa7.88□□□□□ -1.15
ATP2C1-222ENST00000514654 PRG4Q92954 1404 aaPredicted RBP7.88□□□□□ -1.15
ATP2C1-222ENST00000514654 KIF7Q2M1P5 1343 aa7.88□□□□□ -1.15
ATP2C1-222ENST00000514654 TMEM132EQ6IEE7 984 aa7.87□□□□□ -1.15
ATP2C1-222ENST00000514654 IPO8O15397 1037 aaKnown RBP7.87□□□□□ -1.15
ATP2C1-222ENST00000514654 ZNF330Q9Y3S2 320 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms