RNA–Protein interactions for RNA: ENST00000514415.1

HOXC10-204, Transcript of homeobox C10, humanhuman

TSL 3

Gene HOXC10, Length 550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10-204ENST00000514415 ADGRL2O95490 1459 aa17.48■□□□□ 0.39
HOXC10-204ENST00000514415 DENND4BO75064 1496 aaPredicted RBP17.47■□□□□ 0.39
HOXC10-204ENST00000514415 ABCC5O15440 1437 aa17.47■□□□□ 0.39
HOXC10-204ENST00000514415 CDC42BPAQ5VT25 1732 aa17.46■□□□□ 0.39
HOXC10-204ENST00000514415 KIF14Q15058 1648 aa17.44■□□□□ 0.38
HOXC10-204ENST00000514415 CHMP7Q8WUX9 453 aaPredicted RBP17.43■□□□□ 0.38
HOXC10-204ENST00000514415 CAMSAP2Q08AD1 1489 aa17.43■□□□□ 0.38
HOXC10-204ENST00000514415 SHANK2Q9UPX8 1470 aa17.42■□□□□ 0.38
HOXC10-204ENST00000514415 RPRD2Q5VT52 1461 aaKnown RBP17.41■□□□□ 0.38
HOXC10-204ENST00000514415 GPATCH8Q9UKJ3 1502 aaKnown RBP17.41■□□□□ 0.38
HOXC10-204ENST00000514415 RRP7BPQ9NSQ0 103 aa17.4■□□□□ 0.38
HOXC10-204ENST00000514415 MPHOSPH9Q99550 1183 aa17.39■□□□□ 0.37
HOXC10-204ENST00000514415 DDX10Q13206 875 aaKnown RBP17.38■□□□□ 0.37
HOXC10-204ENST00000514415 PLB1Q6P1J6 1458 aa17.37■□□□□ 0.37
HOXC10-204ENST00000514415 ARHGEF5Q12774 1597 aa17.37■□□□□ 0.37
HOXC10-204ENST00000514415 ANP32CO43423 234 aa17.36■□□□□ 0.37
HOXC10-204ENST00000514415 JPH4Q96JJ6 628 aa17.36■□□□□ 0.37
HOXC10-204ENST00000514415 ANKRD30BQ9BXX2 1392 aa17.36■□□□□ 0.37
HOXC10-204ENST00000514415 ABCC10Q5T3U5 1492 aa17.36■□□□□ 0.37
HOXC10-204ENST00000514415 TRIM52Q96A61 297 aa17.35■□□□□ 0.37
HOXC10-204ENST00000514415 PRG4Q92954 1404 aaPredicted RBP17.35■□□□□ 0.37
HOXC10-204ENST00000514415 SHROOM2Q13796 1616 aa17.35■□□□□ 0.37
HOXC10-204ENST00000514415 NCOA1Q15788 1441 aa17.34■□□□□ 0.37
HOXC10-204ENST00000514415 KDM5DQ9BY66 1539 aa17.34■□□□□ 0.37
HOXC10-204ENST00000514415 CHIC2Q9UKJ5 165 aa17.34■□□□□ 0.37
HOXC10-204ENST00000514415 TEX14Q8IWB6 1497 aa17.33■□□□□ 0.37
HOXC10-204ENST00000514415 CHD1O14646 1710 aa17.33■□□□□ 0.36
HOXC10-204ENST00000514415 PZPP20742 1482 aa17.31■□□□□ 0.36
HOXC10-204ENST00000514415 ANKRD30AQ9BXX3 1397 aa17.31■□□□□ 0.36
HOXC10-204ENST00000514415 ATP10BO94823 1461 aa17.31■□□□□ 0.36
HOXC10-204ENST00000514415 PREX2Q70Z35 1606 aa17.3■□□□□ 0.36
HOXC10-204ENST00000514415 CFDP1Q9UEE9 299 aaPredicted RBP17.3■□□□□ 0.36
HOXC10-204ENST00000514415 EIF4G2P78344 907 aaKnown RBP eCLIP17.28■□□□□ 0.36
HOXC10-204ENST00000514415 CDC42BPBQ9Y5S2 1711 aa17.27■□□□□ 0.36
HOXC10-204ENST00000514415 PLEKHD1A6NEE1 506 aa17.27■□□□□ 0.36
HOXC10-204ENST00000514415 KIAA1107Q9UPP5 1409 aa17.27■□□□□ 0.35
HOXC10-204ENST00000514415 MAST1Q9Y2H9 1570 aa17.26■□□□□ 0.35
HOXC10-204ENST00000514415 MBD5Q9P267 1494 aa17.24■□□□□ 0.35
HOXC10-204ENST00000514415 CNTLNQ9NXG0 1405 aa17.23■□□□□ 0.35
HOXC10-204ENST00000514415 ZNF644Q9H582 1327 aaPredicted RBP17.22■□□□□ 0.35
HOXC10-204ENST00000514415 ARHGEF12Q9NZN5 1544 aa17.22■□□□□ 0.35
HOXC10-204ENST00000514415 HSPA5P11021 654 aaKnown RBP17.22■□□□□ 0.35
HOXC10-204ENST00000514415 RSPH4AQ5TD94 716 aa17.22■□□□□ 0.35
HOXC10-204ENST00000514415 L3MBTL2Q969R5 705 aa17.22■□□□□ 0.35
HOXC10-204ENST00000514415 SUPT16HQ9Y5B9 1047 aaKnown RBP17.22■□□□□ 0.35
HOXC10-204ENST00000514415 MYO5CQ9NQX4 1742 aa17.21■□□□□ 0.35
HOXC10-204ENST00000514415 SLC4A1APQ9BWU0 796 aaKnown RBP17.21■□□□□ 0.35
HOXC10-204ENST00000514415 ANKRD50Q9ULJ7 1429 aa17.21■□□□□ 0.34
HOXC10-204ENST00000514415 PTPRGP23470 1445 aa17.2■□□□□ 0.34
HOXC10-204ENST00000514415 C9orf84Q5VXU9 1444 aa17.2■□□□□ 0.34
HOXC10-204ENST00000514415 SPATA31E1Q6ZUB1 1445 aa17.2■□□□□ 0.34
HOXC10-204ENST00000514415 ARID3CA6NKF2 412 aa17.19■□□□□ 0.34
HOXC10-204ENST00000514415 FBLN2P98095 1184 aa17.18■□□□□ 0.34
HOXC10-204ENST00000514415 UHRF1BP1Q6BDS2 1440 aa17.18■□□□□ 0.34
HOXC10-204ENST00000514415 SAMD9LQ8IVG5 1584 aa17.18■□□□□ 0.34
HOXC10-204ENST00000514415 SENP3Q9H4L4 574 aaPredicted RBP17.17■□□□□ 0.34
HOXC10-204ENST00000514415 CCDC141Q6ZP82 1450 aa17.17■□□□□ 0.34
HOXC10-204ENST00000514415 PLEKHH2Q8IVE3 1493 aa17.17■□□□□ 0.34
HOXC10-204ENST00000514415 WASHC2AQ641Q2 1341 aa17.17■□□□□ 0.34
HOXC10-204ENST00000514415 CCDC7Q96M83 1385 aa17.16■□□□□ 0.34
HOXC10-204ENST00000514415 UNC13BO14795 1591 aa17.16■□□□□ 0.34
HOXC10-204ENST00000514415 PLXNC1O60486 1568 aa17.16■□□□□ 0.34
HOXC10-204ENST00000514415 ARID4BQ4LE39 1312 aaPredicted RBP17.16■□□□□ 0.34
HOXC10-204ENST00000514415 KCNH8Q96L42 1107 aa17.15■□□□□ 0.34
HOXC10-204ENST00000514415 HIRIP3Q9BW71 556 aaPredicted RBP17.15■□□□□ 0.34
HOXC10-204ENST00000514415 ABCC2Q92887 1545 aa17.14■□□□□ 0.33
HOXC10-204ENST00000514415 KDM5CP41229 1560 aa17.14■□□□□ 0.33
HOXC10-204ENST00000514415 TSPY4P0CV99 314 aa17.12■□□□□ 0.33
HOXC10-204ENST00000514415 TSPY10P0CW01 314 aa17.12■□□□□ 0.33
HOXC10-204ENST00000514415 RALGAPBQ86X10 1494 aa17.12■□□□□ 0.33
HOXC10-204ENST00000514415 UHRF1BP1LA0JNW5 1464 aa17.1■□□□□ 0.33
HOXC10-204ENST00000514415 NBPF8Q3BBV2 869 aa17.09■□□□□ 0.33
HOXC10-204ENST00000514415 LAMC1P11047 1609 aa17.09■□□□□ 0.33
HOXC10-204ENST00000514415 IQGAP3Q86VI3 1631 aa17.08■□□□□ 0.32
HOXC10-204ENST00000514415 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.08■□□□□ 0.32
HOXC10-204ENST00000514415 CLASP1Q7Z460 1538 aa17.07■□□□□ 0.32
HOXC10-204ENST00000514415 KIF15Q9NS87 1388 aa17.07■□□□□ 0.32
HOXC10-204ENST00000514415 ZNF777Q9ULD5 760 aaPredicted RBP17.07■□□□□ 0.32
HOXC10-204ENST00000514415 TTC37Q6PGP7 1564 aa17.06■□□□□ 0.32
HOXC10-204ENST00000514415 NEFLP07196 543 aa17.06■□□□□ 0.32
HOXC10-204ENST00000514415 FOXD1Q16676 465 aa17.06■□□□□ 0.32
HOXC10-204ENST00000514415 BCORL1Q5H9F3 1711 aa17.06■□□□□ 0.32
HOXC10-204ENST00000514415 ARAP3Q8WWN8 1544 aa17.06■□□□□ 0.32
HOXC10-204ENST00000514415 ROCK2O75116 1388 aaKnown RBP17.05■□□□□ 0.32
HOXC10-204ENST00000514415 PKD2Q13563 968 aa17.05■□□□□ 0.32
HOXC10-204ENST00000514415 NUP155O75694 1391 aa17.04■□□□□ 0.32
HOXC10-204ENST00000514415 ZCCHC11Q5TAX3 1644 aaKnown RBP17.04■□□□□ 0.32
HOXC10-204ENST00000514415 MYT1Q01538 1121 aa17.04■□□□□ 0.32
HOXC10-204ENST00000514415 FAM135AQ9P2D6 1515 aa17.04■□□□□ 0.32
HOXC10-204ENST00000514415 ARHGAP5Q13017 1502 aa17.03■□□□□ 0.32
HOXC10-204ENST00000514415 SYCP2Q9BX26 1530 aa17.02■□□□□ 0.32
HOXC10-204ENST00000514415 DUOX2Q9NRD8 1548 aa17.02■□□□□ 0.32
HOXC10-204ENST00000514415 E9PCH4 1651 aa17.02■□□□□ 0.32
HOXC10-204ENST00000514415 TRPM1Q7Z4N2 1603 aa17.02■□□□□ 0.31
HOXC10-204ENST00000514415 MAGI2Q86UL8 1455 aa17.01■□□□□ 0.31
HOXC10-204ENST00000514415 ERICH6BQ5W0A0 696 aa17.01■□□□□ 0.31
HOXC10-204ENST00000514415 PRKRIP1Q9H875 184 aaPredicted RBP17.01■□□□□ 0.31
HOXC10-204ENST00000514415 KIF7Q2M1P5 1343 aa17■□□□□ 0.31
HOXC10-204ENST00000514415 EIF2AK4Q9P2K8 1649 aaKnown RBP17■□□□□ 0.31
HOXC10-204ENST00000514415 USP47Q96K76 1375 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms