RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 RANGAP1P46060 587 aaPredicted RBP20.41■□□□□ 0.86
PTPN20-229ENST00000513756 HECW1Q76N89 1606 aa20.41■□□□□ 0.86
PTPN20-229ENST00000513756 ILDR2Q71H61 639 aa20.4■□□□□ 0.86
PTPN20-229ENST00000513756 PREX1Q8TCU6 1659 aa20.39■□□□□ 0.86
PTPN20-229ENST00000513756 SCAPERQ9BY12 1400 aa20.38■□□□□ 0.85
PTPN20-229ENST00000513756 ARHGEF12Q9NZN5 1544 aa20.37■□□□□ 0.85
PTPN20-229ENST00000513756 ATP10AO60312 1499 aa20.37■□□□□ 0.85
PTPN20-229ENST00000513756 C9orf84Q5VXU9 1444 aa20.36■□□□□ 0.85
PTPN20-229ENST00000513756 PLCH2O75038 1416 aa20.35■□□□□ 0.85
PTPN20-229ENST00000513756 CEBPAP49715 358 aaPredicted RBP20.32■□□□□ 0.84
PTPN20-229ENST00000513756 UHRF1BP1Q6BDS2 1440 aa20.32■□□□□ 0.84
PTPN20-229ENST00000513756 EFCAB2Q5VUJ9 269 aa20.31■□□□□ 0.84
PTPN20-229ENST00000513756 SETD1BQ9UPS6 1966 aaKnown RBP20.3■□□□□ 0.84
PTPN20-229ENST00000513756 STRCQ7RTU9 1775 aa20.3■□□□□ 0.84
PTPN20-229ENST00000513756 EEA1Q15075 1411 aa20.27■□□□□ 0.84
PTPN20-229ENST00000513756 PTPRTO14522 1441 aa20.27■□□□□ 0.83
PTPN20-229ENST00000513756 SPATA31D1Q6ZQQ2 1576 aa20.26■□□□□ 0.83
PTPN20-229ENST00000513756 CDK13Q14004 1512 aaKnown RBP20.26■□□□□ 0.83
PTPN20-229ENST00000513756 ZNF518AQ6AHZ1 1483 aa20.24■□□□□ 0.83
PTPN20-229ENST00000513756 MYT1LQ9UL68 1186 aa20.24■□□□□ 0.83
PTPN20-229ENST00000513756 CDK11AQ9UQ88 783 aaPredicted RBP20.24■□□□□ 0.83
PTPN20-229ENST00000513756 MYO5CQ9NQX4 1742 aa20.23■□□□□ 0.83
PTPN20-229ENST00000513756 ESF1Q9H501 851 aaKnown RBP20.21■□□□□ 0.83
PTPN20-229ENST00000513756 ATP1B4Q9UN42 357 aaPredicted RBP20.2■□□□□ 0.82
PTPN20-229ENST00000513756 IQSEC2Q5JU85 1478 aa20.19■□□□□ 0.82
PTPN20-229ENST00000513756 AFAP1Q8N556 730 aa20.19■□□□□ 0.82
PTPN20-229ENST00000513756 KDM5CP41229 1560 aa20.17■□□□□ 0.82
PTPN20-229ENST00000513756 ARHGAP5Q13017 1502 aa20.16■□□□□ 0.82
PTPN20-229ENST00000513756 REREQ9P2R6 1566 aa20.16■□□□□ 0.82
PTPN20-229ENST00000513756 FMN1Q68DA7 1419 aa20.15■□□□□ 0.82
PTPN20-229ENST00000513756 TRAPPC8Q9Y2L5 1435 aa20.15■□□□□ 0.82
PTPN20-229ENST00000513756 C3P01024 1663 aa20.15■□□□□ 0.82
PTPN20-229ENST00000513756 KIF14Q15058 1648 aa20.14■□□□□ 0.81
PTPN20-229ENST00000513756 LTBP4Q8N2S1 1624 aa20.14■□□□□ 0.81
PTPN20-229ENST00000513756 DIP2CQ9Y2E4 1556 aa20.14■□□□□ 0.81
PTPN20-229ENST00000513756 CLIP1P30622 1438 aa20.12■□□□□ 0.81
PTPN20-229ENST00000513756 MLH3Q9UHC1 1453 aa20.11■□□□□ 0.81
PTPN20-229ENST00000513756 AGLP35573 1532 aa20.11■□□□□ 0.81
PTPN20-229ENST00000513756 TROQ12816 1431 aaPredicted RBP20.1■□□□□ 0.81
PTPN20-229ENST00000513756 NCOA1Q15788 1441 aa20.1■□□□□ 0.81
PTPN20-229ENST00000513756 CNTLNQ9NXG0 1405 aa20.1■□□□□ 0.81
PTPN20-229ENST00000513756 ABCA6Q8N139 1617 aa20.08■□□□□ 0.8
PTPN20-229ENST00000513756 UBAP1LF5GYI3 381 aa20.03■□□□□ 0.8
PTPN20-229ENST00000513756 UBTFP17480 764 aaKnown RBP20.03■□□□□ 0.8
PTPN20-229ENST00000513756 NPATQ14207 1427 aa20.02■□□□□ 0.8
PTPN20-229ENST00000513756 CAMSAP1Q5T5Y3 1602 aa20.02■□□□□ 0.8
PTPN20-229ENST00000513756 CDC42BPBQ9Y5S2 1711 aa20.02■□□□□ 0.8
PTPN20-229ENST00000513756 ABCC1P33527 1531 aa20■□□□□ 0.79
PTPN20-229ENST00000513756 ARHGAP35Q9NRY4 1499 aa19.99■□□□□ 0.79
PTPN20-229ENST00000513756 NCKAP5LQ9HCH0 1330 aa19.99■□□□□ 0.79
PTPN20-229ENST00000513756 MROH2AA6NES4 1674 aa19.98■□□□□ 0.79
PTPN20-229ENST00000513756 PKD2Q13563 968 aa19.98■□□□□ 0.79
PTPN20-229ENST00000513756 PREX2Q70Z35 1606 aa19.98■□□□□ 0.79
PTPN20-229ENST00000513756 ITSN2Q9NZM3 1697 aa19.97■□□□□ 0.79
PTPN20-229ENST00000513756 ZMYM3Q14202 1370 aa19.97■□□□□ 0.79
PTPN20-229ENST00000513756 KIDINS220Q9ULH0 1771 aa19.97■□□□□ 0.79
PTPN20-229ENST00000513756 ZNF335Q9H4Z2 1342 aaPredicted RBP19.97■□□□□ 0.79
PTPN20-229ENST00000513756 EHMT2Q96KQ7 1210 aa19.94■□□□□ 0.78
PTPN20-229ENST00000513756 PLA2R1Q13018 1463 aa19.92■□□□□ 0.78
PTPN20-229ENST00000513756 LRRIQ1Q96JM4 1722 aa19.91■□□□□ 0.78
PTPN20-229ENST00000513756 SPAG9O60271 1321 aaKnown RBP19.9■□□□□ 0.78
PTPN20-229ENST00000513756 CCDC18Q5T9S5 1454 aa19.9■□□□□ 0.78
PTPN20-229ENST00000513756 SAMD9LQ8IVG5 1584 aa19.89■□□□□ 0.77
PTPN20-229ENST00000513756 SUPT6HQ7KZ85 1726 aaKnown RBP19.88■□□□□ 0.77
PTPN20-229ENST00000513756 ZNF142P52746 1687 aaPredicted RBP19.88■□□□□ 0.77
PTPN20-229ENST00000513756 ZNF777Q9ULD5 760 aaPredicted RBP19.88■□□□□ 0.77
PTPN20-229ENST00000513756 PPP6R1Q9UPN7 881 aa19.88■□□□□ 0.77
PTPN20-229ENST00000513756 TCOF1Q13428 1488 aaKnown RBP19.87■□□□□ 0.77
PTPN20-229ENST00000513756 MYO3AQ8NEV4 1616 aa19.87■□□□□ 0.77
PTPN20-229ENST00000513756 CDC42BPAQ5VT25 1732 aa19.86■□□□□ 0.77
PTPN20-229ENST00000513756 CEP170BQ9Y4F5 1589 aaPredicted RBP19.86■□□□□ 0.77
PTPN20-229ENST00000513756 CLTCQ00610 1675 aaKnown RBP19.85■□□□□ 0.77
PTPN20-229ENST00000513756 PTPRKQ15262 1439 aa19.85■□□□□ 0.77
PTPN20-229ENST00000513756 CASKIN1Q8WXD9 1431 aa19.85■□□□□ 0.77
PTPN20-229ENST00000513756 SCAF1Q9H7N4 1312 aaKnown RBP19.84■□□□□ 0.77
PTPN20-229ENST00000513756 TOM1O60784 492 aa19.83■□□□□ 0.77
PTPN20-229ENST00000513756 SYCP2Q9BX26 1530 aa19.82■□□□□ 0.76
PTPN20-229ENST00000513756 HSPA1LP34931 641 aa19.82■□□□□ 0.76
PTPN20-229ENST00000513756 HNRNPMP52272 730 aaKnown RBP eCLIP19.82■□□□□ 0.76
PTPN20-229ENST00000513756 GGT6Q6P531 493 aa19.82■□□□□ 0.76
PTPN20-229ENST00000513756 A2MP01023 1474 aa19.81■□□□□ 0.76
PTPN20-229ENST00000513756 ATP7AQ04656 1500 aa19.81■□□□□ 0.76
PTPN20-229ENST00000513756 MED1Q15648 1581 aaPredicted RBP19.8■□□□□ 0.76
PTPN20-229ENST00000513756 PIP4K2BP78356 416 aa19.8■□□□□ 0.76
PTPN20-229ENST00000513756 PLEKHH2Q8IVE3 1493 aa19.79■□□□□ 0.76
PTPN20-229ENST00000513756 PLXNC1O60486 1568 aa19.79■□□□□ 0.76
PTPN20-229ENST00000513756 KIAA1107Q9UPP5 1409 aa19.79■□□□□ 0.76
PTPN20-229ENST00000513756 A2ML1A8K2U0 1454 aa19.78■□□□□ 0.76
PTPN20-229ENST00000513756 CPS1P31327 1500 aa19.77■□□□□ 0.76
PTPN20-229ENST00000513756 GPATCH8Q9UKJ3 1502 aaKnown RBP19.77■□□□□ 0.76
PTPN20-229ENST00000513756 CFDP1Q9UEE9 299 aaPredicted RBP19.76■□□□□ 0.75
PTPN20-229ENST00000513756 INO80Q9ULG1 1556 aaPredicted RBP19.75■□□□□ 0.75
PTPN20-229ENST00000513756 DNMT1P26358 1616 aaKnown RBP19.74■□□□□ 0.75
PTPN20-229ENST00000513756 PHF23Q9BUL5 403 aaPredicted RBP19.74■□□□□ 0.75
PTPN20-229ENST00000513756 FYCO1Q9BQS8 1478 aa19.73■□□□□ 0.75
PTPN20-229ENST00000513756 SHANK2Q9UPX8 1470 aa19.73■□□□□ 0.75
PTPN20-229ENST00000513756 ADGBQ8N7X0 1667 aa19.71■□□□□ 0.75
PTPN20-229ENST00000513756 CCNB3Q8WWL7 1395 aa19.71■□□□□ 0.75
PTPN20-229ENST00000513756 POLR1AO95602 1720 aaPredicted RBP19.7■□□□□ 0.74
PTPN20-229ENST00000513756 ANKLE2Q86XL3 938 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms