RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 SETD1BQ9UPS6 1966 aaKnown RBP21.05■□□□□ 0.96
SFXN1-210ENST00000513725 MAGI2Q86UL8 1455 aa21.04■□□□□ 0.96
SFXN1-210ENST00000513725 CFAP74Q9C0B2 1584 aa20.97■□□□□ 0.95
SFXN1-210ENST00000513725 HSPA1LP34931 641 aa20.97■□□□□ 0.95
SFXN1-210ENST00000513725 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.95■□□□□ 0.94
SFXN1-210ENST00000513725 HNRNPUL2Q1KMD3 747 aaKnown RBP20.95■□□□□ 0.94
SFXN1-210ENST00000513725 CTTNBP2Q8WZ74 1663 aa20.95■□□□□ 0.94
SFXN1-210ENST00000513725 NCOA1Q15788 1441 aa20.94■□□□□ 0.94
SFXN1-210ENST00000513725 SCAF1Q9H7N4 1312 aaKnown RBP20.92■□□□□ 0.94
SFXN1-210ENST00000513725 ATP10AO60312 1499 aa20.92■□□□□ 0.94
SFXN1-210ENST00000513725 HECW1Q76N89 1606 aa20.92■□□□□ 0.94
SFXN1-210ENST00000513725 C9orf84Q5VXU9 1444 aa20.91■□□□□ 0.94
SFXN1-210ENST00000513725 ZNF335Q9H4Z2 1342 aaPredicted RBP20.91■□□□□ 0.94
SFXN1-210ENST00000513725 PIP4K2BP78356 416 aa20.86■□□□□ 0.93
SFXN1-210ENST00000513725 TRAPPC8Q9Y2L5 1435 aa20.84■□□□□ 0.93
SFXN1-210ENST00000513725 TOM1O60784 492 aa20.82■□□□□ 0.92
SFXN1-210ENST00000513725 C3P01024 1663 aa20.82■□□□□ 0.92
SFXN1-210ENST00000513725 P3H3Q8IVL6 736 aa20.81■□□□□ 0.92
SFXN1-210ENST00000513725 CAMSAP1Q5T5Y3 1602 aa20.81■□□□□ 0.92
SFXN1-210ENST00000513725 ESF1Q9H501 851 aaKnown RBP20.8■□□□□ 0.92
SFXN1-210ENST00000513725 SCAPERQ9BY12 1400 aa20.79■□□□□ 0.92
SFXN1-210ENST00000513725 PLEKHD1A6NEE1 506 aa20.79■□□□□ 0.92
SFXN1-210ENST00000513725 NCKAP5LQ9HCH0 1330 aa20.78■□□□□ 0.92
SFXN1-210ENST00000513725 RAPGEF6Q8TEU7 1601 aa20.78■□□□□ 0.92
SFXN1-210ENST00000513725 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.76■□□□□ 0.91
SFXN1-210ENST00000513725 PKD2Q13563 968 aa20.72■□□□□ 0.91
SFXN1-210ENST00000513725 NUP153P49790 1475 aaKnown RBP20.69■□□□□ 0.9
SFXN1-210ENST00000513725 MYT1LQ9UL68 1186 aa20.66■□□□□ 0.9
SFXN1-210ENST00000513725 PPP6R1Q9UPN7 881 aa20.66■□□□□ 0.9
SFXN1-210ENST00000513725 PLA2R1Q13018 1463 aa20.65■□□□□ 0.9
SFXN1-210ENST00000513725 CNTLNQ9NXG0 1405 aa20.65■□□□□ 0.9
SFXN1-210ENST00000513725 PLCH2O75038 1416 aa20.64■□□□□ 0.89
SFXN1-210ENST00000513725 NPATQ14207 1427 aa20.64■□□□□ 0.89
SFXN1-210ENST00000513725 RGS17Q9UGC6 210 aaPredicted RBP20.64■□□□□ 0.89
SFXN1-210ENST00000513725 REREQ9P2R6 1566 aa20.63■□□□□ 0.89
SFXN1-210ENST00000513725 AGLP35573 1532 aa20.63■□□□□ 0.89
SFXN1-210ENST00000513725 CPS1P31327 1500 aa20.62■□□□□ 0.89
SFXN1-210ENST00000513725 ZNF518AQ6AHZ1 1483 aa20.62■□□□□ 0.89
SFXN1-210ENST00000513725 TCOF1Q13428 1488 aaKnown RBP20.61■□□□□ 0.89
SFXN1-210ENST00000513725 PTPRKQ15262 1439 aa20.61■□□□□ 0.89
SFXN1-210ENST00000513725 EFCAB2Q5VUJ9 269 aa20.59■□□□□ 0.89
SFXN1-210ENST00000513725 DIP2CQ9Y2E4 1556 aa20.59■□□□□ 0.89
SFXN1-210ENST00000513725 SAMD9Q5K651 1589 aa20.58■□□□□ 0.88
SFXN1-210ENST00000513725 SUPT6HQ7KZ85 1726 aaKnown RBP20.56■□□□□ 0.88
SFXN1-210ENST00000513725 KDM5CP41229 1560 aa20.55■□□□□ 0.88
SFXN1-210ENST00000513725 AFAP1Q8N556 730 aa20.55■□□□□ 0.88
SFXN1-210ENST00000513725 SENP3Q9H4L4 574 aaPredicted RBP20.55■□□□□ 0.88
SFXN1-210ENST00000513725 ZNF142P52746 1687 aaPredicted RBP20.53■□□□□ 0.88
SFXN1-210ENST00000513725 SHANK2Q9UPX8 1470 aa20.52■□□□□ 0.88
SFXN1-210ENST00000513725 MROH2AA6NES4 1674 aa20.51■□□□□ 0.87
SFXN1-210ENST00000513725 PRXQ9BXM0 1461 aa20.51■□□□□ 0.87
SFXN1-210ENST00000513725 ZMYM3Q14202 1370 aa20.51■□□□□ 0.87
SFXN1-210ENST00000513725 CEP170BQ9Y4F5 1589 aaPredicted RBP20.5■□□□□ 0.87
SFXN1-210ENST00000513725 ABCA6Q8N139 1617 aa20.49■□□□□ 0.87
SFXN1-210ENST00000513725 MYO3AQ8NEV4 1616 aa20.49■□□□□ 0.87
SFXN1-210ENST00000513725 POTEAQ6S8J7 498 aa20.49■□□□□ 0.87
SFXN1-210ENST00000513725 MYO5CQ9NQX4 1742 aa20.47■□□□□ 0.87
SFXN1-210ENST00000513725 ALKQ9UM73 1620 aa20.47■□□□□ 0.87
SFXN1-210ENST00000513725 MLH3Q9UHC1 1453 aa20.47■□□□□ 0.87
SFXN1-210ENST00000513725 ARHGAP5Q13017 1502 aa20.39■□□□□ 0.85
SFXN1-210ENST00000513725 SETD1AO15047 1707 aaKnown RBP20.39■□□□□ 0.85
SFXN1-210ENST00000513725 POLR1AO95602 1720 aaPredicted RBP20.37■□□□□ 0.85
SFXN1-210ENST00000513725 CDK13Q14004 1512 aaKnown RBP20.36■□□□□ 0.85
SFXN1-210ENST00000513725 A2ML1A8K2U0 1454 aa20.35■□□□□ 0.85
SFXN1-210ENST00000513725 VWDEQ8N2E2 1590 aa20.34■□□□□ 0.85
SFXN1-210ENST00000513725 NEURL4Q96JN8 1562 aa20.34■□□□□ 0.85
SFXN1-210ENST00000513725 CLTCQ00610 1675 aaKnown RBP20.33■□□□□ 0.85
SFXN1-210ENST00000513725 RANGAP1P46060 587 aaPredicted RBP20.33■□□□□ 0.85
SFXN1-210ENST00000513725 UPF1Q92900 1129 aaKnown RBP eCLIP20.33■□□□□ 0.85
SFXN1-210ENST00000513725 DNMT1P26358 1616 aaKnown RBP20.33■□□□□ 0.84
SFXN1-210ENST00000513725 RNF17Q9BXT8 1623 aaKnown RBP20.31■□□□□ 0.84
SFXN1-210ENST00000513725 SRCAPQ6ZRS2 3230 aa20.31■□□□□ 0.84
SFXN1-210ENST00000513725 KIDINS220Q9ULH0 1771 aa20.29■□□□□ 0.84
SFXN1-210ENST00000513725 ANKLE2Q86XL3 938 aa20.29■□□□□ 0.84
SFXN1-210ENST00000513725 CDK11AQ9UQ88 783 aaPredicted RBP20.28■□□□□ 0.84
SFXN1-210ENST00000513725 KIF14Q15058 1648 aa20.27■□□□□ 0.83
SFXN1-210ENST00000513725 LRRC7Q96NW7 1537 aa20.26■□□□□ 0.83
SFXN1-210ENST00000513725 ABCC1P33527 1531 aa20.22■□□□□ 0.83
SFXN1-210ENST00000513725 SYNMO15061 1565 aa20.22■□□□□ 0.83
SFXN1-210ENST00000513725 NPHP4O75161 1426 aaPredicted RBP20.21■□□□□ 0.83
SFXN1-210ENST00000513725 ITSN2Q9NZM3 1697 aa20.21■□□□□ 0.83
SFXN1-210ENST00000513725 CDC42BPBQ9Y5S2 1711 aa20.19■□□□□ 0.82
SFXN1-210ENST00000513725 MED14O60244 1454 aa20.19■□□□□ 0.82
SFXN1-210ENST00000513725 GGT6Q6P531 493 aa20.19■□□□□ 0.82
SFXN1-210ENST00000513725 ATP1B4Q9UN42 357 aaPredicted RBP20.19■□□□□ 0.82
SFXN1-210ENST00000513725 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.19■□□□□ 0.82
SFXN1-210ENST00000513725 THEMISQ8N1K5 641 aaPredicted RBP20.18■□□□□ 0.82
SFXN1-210ENST00000513725 CLIP1P30622 1438 aa20.18■□□□□ 0.82
SFXN1-210ENST00000513725 TROQ12816 1431 aaPredicted RBP20.17■□□□□ 0.82
SFXN1-210ENST00000513725 DEPDC5O75140 1603 aa20.16■□□□□ 0.82
SFXN1-210ENST00000513725 STRCP1A6NGW2 1772 aa20.16■□□□□ 0.82
SFXN1-210ENST00000513725 FAM135BQ49AJ0 1406 aa20.15■□□□□ 0.82
SFXN1-210ENST00000513725 TNRQ92752 1358 aa20.14■□□□□ 0.81
SFXN1-210ENST00000513725 IQGAP1P46940 1657 aa20.13■□□□□ 0.81
SFXN1-210ENST00000513725 SAMD9LQ8IVG5 1584 aa20.12■□□□□ 0.81
SFXN1-210ENST00000513725 SPAG9O60271 1321 aaKnown RBP20.12■□□□□ 0.81
SFXN1-210ENST00000513725 TRIM52Q96A61 297 aa20.11■□□□□ 0.81
SFXN1-210ENST00000513725 PREX2Q70Z35 1606 aa20.11■□□□□ 0.81
SFXN1-210ENST00000513725 PLXNC1O60486 1568 aa20.11■□□□□ 0.81
SFXN1-210ENST00000513725 A2MP01023 1474 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms