RNA–Protein interactions for RNA: ENST00000512304.2

PROM1-213, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-213ENST00000512304 RAPGEF6Q8TEU7 1601 aa15.75■□□□□ 0.11
PROM1-213ENST00000512304 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.73■□□□□ 0.11
PROM1-213ENST00000512304 HECW1Q76N89 1606 aa15.73■□□□□ 0.11
PROM1-213ENST00000512304 PLEKHD1A6NEE1 506 aa15.73■□□□□ 0.11
PROM1-213ENST00000512304 ZMYM4Q5VZL5 1548 aa15.73■□□□□ 0.11
PROM1-213ENST00000512304 TTC37Q6PGP7 1564 aa15.72■□□□□ 0.11
PROM1-213ENST00000512304 SCAPERQ9BY12 1400 aa15.72■□□□□ 0.11
PROM1-213ENST00000512304 ARHGEF12Q9NZN5 1544 aa15.72■□□□□ 0.11
PROM1-213ENST00000512304 STRCQ7RTU9 1775 aa15.71■□□□□ 0.11
PROM1-213ENST00000512304 SAMD9Q5K651 1589 aa15.7■□□□□ 0.1
PROM1-213ENST00000512304 FAM9AQ8IZU1 332 aaPredicted RBP15.7■□□□□ 0.1
PROM1-213ENST00000512304 EFCAB5A4FU69 1503 aa15.68■□□□□ 0.1
PROM1-213ENST00000512304 ATP10AO60312 1499 aa15.67■□□□□ 0.1
PROM1-213ENST00000512304 DMRT2Q9Y5R5 561 aa15.67■□□□□ 0.1
PROM1-213ENST00000512304 LTBP4Q8N2S1 1624 aa15.67■□□□□ 0.1
PROM1-213ENST00000512304 FER1L4A9Z1Z3 1794 aa15.67■□□□□ 0.1
PROM1-213ENST00000512304 AFAP1Q8N556 730 aa15.66■□□□□ 0.1
PROM1-213ENST00000512304 MAGI2Q86UL8 1455 aa15.65■□□□□ 0.1
PROM1-213ENST00000512304 CDK13Q14004 1512 aaKnown RBP15.65■□□□□ 0.1
PROM1-213ENST00000512304 UHRF1BP1Q6BDS2 1440 aa15.65■□□□□ 0.1
PROM1-213ENST00000512304 C9orf84Q5VXU9 1444 aa15.64■□□□□ 0.09
PROM1-213ENST00000512304 PREX1Q8TCU6 1659 aa15.63■□□□□ 0.09
PROM1-213ENST00000512304 PTPRTO14522 1441 aa15.62■□□□□ 0.09
PROM1-213ENST00000512304 PLCH2O75038 1416 aa15.62■□□□□ 0.09
PROM1-213ENST00000512304 CSRNP3Q8WYN3 585 aa15.61■□□□□ 0.09
PROM1-213ENST00000512304 ZNF335Q9H4Z2 1342 aaPredicted RBP15.61■□□□□ 0.09
PROM1-213ENST00000512304 NCKAP5LQ9HCH0 1330 aa15.6■□□□□ 0.09
PROM1-213ENST00000512304 UBAP1LF5GYI3 381 aa15.59■□□□□ 0.09
PROM1-213ENST00000512304 CFAP74Q9C0B2 1584 aa15.58■□□□□ 0.08
PROM1-213ENST00000512304 MYT1LQ9UL68 1186 aa15.57■□□□□ 0.08
PROM1-213ENST00000512304 EFCAB2Q5VUJ9 269 aa15.56■□□□□ 0.08
PROM1-213ENST00000512304 ATP1B4Q9UN42 357 aaPredicted RBP15.56■□□□□ 0.08
PROM1-213ENST00000512304 NCOA1Q15788 1441 aa15.56■□□□□ 0.08
PROM1-213ENST00000512304 EHMT2Q96KQ7 1210 aa15.55■□□□□ 0.08
PROM1-213ENST00000512304 SCAF1Q9H7N4 1312 aaKnown RBP15.52■□□□□ 0.08
PROM1-213ENST00000512304 TRAPPC8Q9Y2L5 1435 aa15.51■□□□□ 0.07
PROM1-213ENST00000512304 DIP2CQ9Y2E4 1556 aa15.51■□□□□ 0.07
PROM1-213ENST00000512304 HSPA1LP34931 641 aa15.51■□□□□ 0.07
PROM1-213ENST00000512304 C3P01024 1663 aa15.49■□□□□ 0.07
PROM1-213ENST00000512304 KIF14Q15058 1648 aa15.49■□□□□ 0.07
PROM1-213ENST00000512304 ZNF518AQ6AHZ1 1483 aa15.48■□□□□ 0.07
PROM1-213ENST00000512304 PIP4K2BP78356 416 aa15.48■□□□□ 0.07
PROM1-213ENST00000512304 MAPK8IP2Q13387 824 aaPredicted RBP15.48■□□□□ 0.07
PROM1-213ENST00000512304 IQSEC2Q5JU85 1478 aa15.47■□□□□ 0.07
PROM1-213ENST00000512304 CAMSAP1Q5T5Y3 1602 aa15.47■□□□□ 0.07
PROM1-213ENST00000512304 ABCA6Q8N139 1617 aa15.47■□□□□ 0.07
PROM1-213ENST00000512304 KDM5CP41229 1560 aa15.46■□□□□ 0.07
PROM1-213ENST00000512304 ESF1Q9H501 851 aaKnown RBP15.46■□□□□ 0.07
PROM1-213ENST00000512304 ARHGAP5Q13017 1502 aa15.45■□□□□ 0.06
PROM1-213ENST00000512304 MED1Q15648 1581 aaPredicted RBP15.43■□□□□ 0.06
PROM1-213ENST00000512304 MLH3Q9UHC1 1453 aa15.41■□□□□ 0.06
PROM1-213ENST00000512304 ZMYM3Q14202 1370 aa15.41■□□□□ 0.06
PROM1-213ENST00000512304 AGLP35573 1532 aa15.39■□□□□ 0.05
PROM1-213ENST00000512304 TROQ12816 1431 aaPredicted RBP15.39■□□□□ 0.05
PROM1-213ENST00000512304 REREQ9P2R6 1566 aa15.39■□□□□ 0.05
PROM1-213ENST00000512304 MYO5CQ9NQX4 1742 aa15.37■□□□□ 0.05
PROM1-213ENST00000512304 TCOF1Q13428 1488 aaKnown RBP15.35■□□□□ 0.05
PROM1-213ENST00000512304 NPATQ14207 1427 aa15.34■□□□□ 0.05
PROM1-213ENST00000512304 CNTLNQ9NXG0 1405 aa15.34■□□□□ 0.05
PROM1-213ENST00000512304 ZNF777Q9ULD5 760 aaPredicted RBP15.34■□□□□ 0.05
PROM1-213ENST00000512304 PTPRKQ15262 1439 aa15.34■□□□□ 0.05
PROM1-213ENST00000512304 ARHGAP35Q9NRY4 1499 aa15.33■□□□□ 0.05
PROM1-213ENST00000512304 ABCC1P33527 1531 aa15.33■□□□□ 0.05
PROM1-213ENST00000512304 SETD1BQ9UPS6 1966 aaKnown RBP15.33■□□□□ 0.05
PROM1-213ENST00000512304 HNRNPMP52272 730 aaKnown RBP eCLIP15.33■□□□□ 0.04
PROM1-213ENST00000512304 PKD2Q13563 968 aa15.33■□□□□ 0.04
PROM1-213ENST00000512304 CDK11AQ9UQ88 783 aaPredicted RBP15.33■□□□□ 0.04
PROM1-213ENST00000512304 GGT6Q6P531 493 aa15.31■□□□□ 0.04
PROM1-213ENST00000512304 KIDINS220Q9ULH0 1771 aa15.31■□□□□ 0.04
PROM1-213ENST00000512304 RGS17Q9UGC6 210 aaPredicted RBP15.3■□□□□ 0.04
PROM1-213ENST00000512304 ALKQ9UM73 1620 aa15.29■□□□□ 0.04
PROM1-213ENST00000512304 PLA2R1Q13018 1463 aa15.29■□□□□ 0.04
PROM1-213ENST00000512304 UBTFP17480 764 aaKnown RBP15.29■□□□□ 0.04
PROM1-213ENST00000512304 FBXO31Q5XUX0 539 aaPredicted RBP15.29■□□□□ 0.04
PROM1-213ENST00000512304 CDC42BPBQ9Y5S2 1711 aa15.29■□□□□ 0.04
PROM1-213ENST00000512304 MYO3AQ8NEV4 1616 aa15.28■□□□□ 0.04
PROM1-213ENST00000512304 CEP170BQ9Y4F5 1589 aaPredicted RBP15.28■□□□□ 0.04
PROM1-213ENST00000512304 CLIP1P30622 1438 aa15.28■□□□□ 0.04
PROM1-213ENST00000512304 FMN1Q68DA7 1419 aa15.28■□□□□ 0.04
PROM1-213ENST00000512304 TOM1O60784 492 aa15.28■□□□□ 0.04
PROM1-213ENST00000512304 SAMD9LQ8IVG5 1584 aa15.28■□□□□ 0.04
PROM1-213ENST00000512304 SPAG9O60271 1321 aaKnown RBP15.27■□□□□ 0.04
PROM1-213ENST00000512304 ITSN2Q9NZM3 1697 aa15.25■□□□□ 0.03
PROM1-213ENST00000512304 LRRIQ1Q96JM4 1722 aa15.25■□□□□ 0.03
PROM1-213ENST00000512304 SHANK2Q9UPX8 1470 aa15.25■□□□□ 0.03
PROM1-213ENST00000512304 CLTCQ00610 1675 aaKnown RBP15.25■□□□□ 0.03
PROM1-213ENST00000512304 EEA1Q15075 1411 aa15.25■□□□□ 0.03
PROM1-213ENST00000512304 SYCP2Q9BX26 1530 aa15.23■□□□□ 0.03
PROM1-213ENST00000512304 PREX2Q70Z35 1606 aa15.23■□□□□ 0.03
PROM1-213ENST00000512304 NEURL4Q96JN8 1562 aa15.23■□□□□ 0.03
PROM1-213ENST00000512304 SUPT6HQ7KZ85 1726 aaKnown RBP15.22■□□□□ 0.03
PROM1-213ENST00000512304 MROH2AA6NES4 1674 aa15.21■□□□□ 0.03
PROM1-213ENST00000512304 ZNF142P52746 1687 aaPredicted RBP15.21■□□□□ 0.03
PROM1-213ENST00000512304 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.21■□□□□ 0.02
PROM1-213ENST00000512304 A2ML1A8K2U0 1454 aa15.2■□□□□ 0.02
PROM1-213ENST00000512304 A2MP01023 1474 aa15.2■□□□□ 0.02
PROM1-213ENST00000512304 ZNF644Q9H582 1327 aaPredicted RBP15.2■□□□□ 0.02
PROM1-213ENST00000512304 DNMT1P26358 1616 aaKnown RBP15.2■□□□□ 0.02
PROM1-213ENST00000512304 PLXNC1O60486 1568 aa15.19■□□□□ 0.02
PROM1-213ENST00000512304 VWDEQ8N2E2 1590 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms