RNA–Protein interactions for RNA: ENST00000512042.1

SPOCK3-220, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 5

Gene SPOCK3, Length 505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-220ENST00000512042 EHMT2Q96KQ7 1210 aa30.63■■■□□ 2.49
SPOCK3-220ENST00000512042 SPATA31D1Q6ZQQ2 1576 aa30.62■■■□□ 2.49
SPOCK3-220ENST00000512042 CFAP74Q9C0B2 1584 aa30.62■■■□□ 2.49
SPOCK3-220ENST00000512042 SAMD9Q5K651 1589 aa30.61■■■□□ 2.49
SPOCK3-220ENST00000512042 FER1L4A9Z1Z3 1794 aa30.6■■■□□ 2.49
SPOCK3-220ENST00000512042 CEBPAP49715 358 aaPredicted RBP30.58■■■□□ 2.49
SPOCK3-220ENST00000512042 LOC105371045A0A1W2PR82 267 aa30.57■■■□□ 2.48
SPOCK3-220ENST00000512042 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.55■■■□□ 2.48
SPOCK3-220ENST00000512042 PREX1Q8TCU6 1659 aa30.55■■■□□ 2.48
SPOCK3-220ENST00000512042 HECW1Q76N89 1606 aa30.54■■■□□ 2.48
SPOCK3-220ENST00000512042 ARHGEF12Q9NZN5 1544 aa30.53■■■□□ 2.48
SPOCK3-220ENST00000512042 SCAPERQ9BY12 1400 aa30.5■■■□□ 2.47
SPOCK3-220ENST00000512042 ATP10AO60312 1499 aa30.5■■■□□ 2.47
SPOCK3-220ENST00000512042 STRCQ7RTU9 1775 aa30.49■■■□□ 2.47
SPOCK3-220ENST00000512042 UHRF1BP1Q6BDS2 1440 aa30.48■■■□□ 2.47
SPOCK3-220ENST00000512042 C9orf84Q5VXU9 1444 aa30.46■■■□□ 2.47
SPOCK3-220ENST00000512042 PTPRTO14522 1441 aa30.45■■■□□ 2.46
SPOCK3-220ENST00000512042 RANGAP1P46060 587 aaPredicted RBP30.44■■■□□ 2.46
SPOCK3-220ENST00000512042 PLCH2O75038 1416 aa30.39■■■□□ 2.46
SPOCK3-220ENST00000512042 LTBP4Q8N2S1 1624 aa30.33■■■□□ 2.45
SPOCK3-220ENST00000512042 IQSEC2Q5JU85 1478 aa30.33■■■□□ 2.45
SPOCK3-220ENST00000512042 EFCAB2Q5VUJ9 269 aa30.33■■■□□ 2.45
SPOCK3-220ENST00000512042 SETD1BQ9UPS6 1966 aaKnown RBP30.32■■■□□ 2.44
SPOCK3-220ENST00000512042 CLIP1P30622 1438 aa30.28■■■□□ 2.44
SPOCK3-220ENST00000512042 CEP162Q5TB80 1403 aa30.27■■■□□ 2.44
SPOCK3-220ENST00000512042 CDK13Q14004 1512 aaKnown RBP30.24■■■□□ 2.43
SPOCK3-220ENST00000512042 MYT1LQ9UL68 1186 aa30.24■■■□□ 2.43
SPOCK3-220ENST00000512042 AFAP1Q8N556 730 aa30.23■■■□□ 2.43
SPOCK3-220ENST00000512042 ZNF518AQ6AHZ1 1483 aa30.23■■■□□ 2.43
SPOCK3-220ENST00000512042 ARHGAP35Q9NRY4 1499 aa30.23■■■□□ 2.43
SPOCK3-220ENST00000512042 ESF1Q9H501 851 aaKnown RBP30.22■■■□□ 2.43
SPOCK3-220ENST00000512042 TRAPPC8Q9Y2L5 1435 aa30.21■■■□□ 2.43
SPOCK3-220ENST00000512042 NCOA1Q15788 1441 aa30.2■■■□□ 2.42
SPOCK3-220ENST00000512042 UBAP1LF5GYI3 381 aa30.16■■■□□ 2.42
SPOCK3-220ENST00000512042 C3P01024 1663 aa30.15■■■□□ 2.42
SPOCK3-220ENST00000512042 KDM5CP41229 1560 aa30.14■■■□□ 2.42
SPOCK3-220ENST00000512042 DIP2CQ9Y2E4 1556 aa30.12■■■□□ 2.41
SPOCK3-220ENST00000512042 REREQ9P2R6 1566 aa30.11■■■□□ 2.41
SPOCK3-220ENST00000512042 MYO5CQ9NQX4 1742 aa30.11■■■□□ 2.41
SPOCK3-220ENST00000512042 CDK11AQ9UQ88 783 aaPredicted RBP30.1■■■□□ 2.41
SPOCK3-220ENST00000512042 ATP1B4Q9UN42 357 aaPredicted RBP30.09■■■□□ 2.41
SPOCK3-220ENST00000512042 FMN1Q68DA7 1419 aa30.08■■■□□ 2.41
SPOCK3-220ENST00000512042 ZNF335Q9H4Z2 1342 aaPredicted RBP30.07■■■□□ 2.4
SPOCK3-220ENST00000512042 ARHGAP5Q13017 1502 aa30.06■■■□□ 2.4
SPOCK3-220ENST00000512042 AGLP35573 1532 aa30.06■■■□□ 2.4
SPOCK3-220ENST00000512042 MLH3Q9UHC1 1453 aa30.06■■■□□ 2.4
SPOCK3-220ENST00000512042 CNTLNQ9NXG0 1405 aa30.05■■■□□ 2.4
SPOCK3-220ENST00000512042 CAMSAP1Q5T5Y3 1602 aa30.04■■■□□ 2.4
SPOCK3-220ENST00000512042 NCKAP5LQ9HCH0 1330 aa30.03■■■□□ 2.4
SPOCK3-220ENST00000512042 ABCA6Q8N139 1617 aa30.01■■■□□ 2.39
SPOCK3-220ENST00000512042 KIF14Q15058 1648 aa29.99■■■□□ 2.39
SPOCK3-220ENST00000512042 NPATQ14207 1427 aa29.98■■■□□ 2.39
SPOCK3-220ENST00000512042 TROQ12816 1431 aaPredicted RBP29.96■■■□□ 2.39
SPOCK3-220ENST00000512042 PKD2Q13563 968 aa29.94■■■□□ 2.38
SPOCK3-220ENST00000512042 ZMYM3Q14202 1370 aa29.91■■■□□ 2.38
SPOCK3-220ENST00000512042 VPS8Q8N3P4 1428 aa29.9■■■□□ 2.38
SPOCK3-220ENST00000512042 HSPA1LP34931 641 aa29.89■■■□□ 2.38
SPOCK3-220ENST00000512042 CASKIN1Q8WXD9 1431 aa29.88■■■□□ 2.37
SPOCK3-220ENST00000512042 MED1Q15648 1581 aaPredicted RBP29.87■■■□□ 2.37
SPOCK3-220ENST00000512042 SCAF1Q9H7N4 1312 aaKnown RBP29.87■■■□□ 2.37
SPOCK3-220ENST00000512042 PLA2R1Q13018 1463 aa29.87■■■□□ 2.37
SPOCK3-220ENST00000512042 ABCC1P33527 1531 aa29.84■■■□□ 2.37
SPOCK3-220ENST00000512042 FYCO1Q9BQS8 1478 aa29.83■■■□□ 2.37
SPOCK3-220ENST00000512042 PIP4K2BP78356 416 aa29.83■■■□□ 2.37
SPOCK3-220ENST00000512042 PPP6R1Q9UPN7 881 aa29.83■■■□□ 2.37
SPOCK3-220ENST00000512042 MROH2AA6NES4 1674 aa29.82■■■□□ 2.36
SPOCK3-220ENST00000512042 TCOF1Q13428 1488 aaKnown RBP29.82■■■□□ 2.36
SPOCK3-220ENST00000512042 CDC42BPBQ9Y5S2 1711 aa29.81■■■□□ 2.36
SPOCK3-220ENST00000512042 KIDINS220Q9ULH0 1771 aa29.8■■■□□ 2.36
SPOCK3-220ENST00000512042 TOM1O60784 492 aa29.79■■■□□ 2.36
SPOCK3-220ENST00000512042 ITSN2Q9NZM3 1697 aa29.76■■■□□ 2.36
SPOCK3-220ENST00000512042 PHF23Q9BUL5 403 aaPredicted RBP29.76■■■□□ 2.35
SPOCK3-220ENST00000512042 PREX2Q70Z35 1606 aa29.74■■■□□ 2.35
SPOCK3-220ENST00000512042 CEP170BQ9Y4F5 1589 aaPredicted RBP29.74■■■□□ 2.35
SPOCK3-220ENST00000512042 ZNF142P52746 1687 aaPredicted RBP29.74■■■□□ 2.35
SPOCK3-220ENST00000512042 MYO3AQ8NEV4 1616 aa29.74■■■□□ 2.35
SPOCK3-220ENST00000512042 PTPRKQ15262 1439 aa29.73■■■□□ 2.35
SPOCK3-220ENST00000512042 CCDC18Q5T9S5 1454 aa29.72■■■□□ 2.35
SPOCK3-220ENST00000512042 SPAG9O60271 1321 aaKnown RBP29.7■■■□□ 2.34
SPOCK3-220ENST00000512042 SAMD9LQ8IVG5 1584 aa29.69■■■□□ 2.34
SPOCK3-220ENST00000512042 ZNF777Q9ULD5 760 aaPredicted RBP29.67■■■□□ 2.34
SPOCK3-220ENST00000512042 SUPT6HQ7KZ85 1726 aaKnown RBP29.66■■■□□ 2.34
SPOCK3-220ENST00000512042 APLP2Q06481 763 aa29.66■■■□□ 2.34
SPOCK3-220ENST00000512042 CLTCQ00610 1675 aaKnown RBP29.66■■■□□ 2.34
SPOCK3-220ENST00000512042 GGT6Q6P531 493 aa29.65■■■□□ 2.34
SPOCK3-220ENST00000512042 CPS1P31327 1500 aa29.65■■■□□ 2.34
SPOCK3-220ENST00000512042 MAP3K1Q13233 1512 aa29.62■■■□□ 2.33
SPOCK3-220ENST00000512042 A2ML1A8K2U0 1454 aa29.61■■■□□ 2.33
SPOCK3-220ENST00000512042 SHANK2Q9UPX8 1470 aa29.61■■■□□ 2.33
SPOCK3-220ENST00000512042 LRRIQ1Q96JM4 1722 aa29.6■■■□□ 2.33
SPOCK3-220ENST00000512042 HNRNPMP52272 730 aaKnown RBP eCLIP29.6■■■□□ 2.33
SPOCK3-220ENST00000512042 A2MP01023 1474 aa29.59■■■□□ 2.33
SPOCK3-220ENST00000512042 SYCP2Q9BX26 1530 aa29.56■■■□□ 2.32
SPOCK3-220ENST00000512042 PLXNC1O60486 1568 aa29.56■■■□□ 2.32
SPOCK3-220ENST00000512042 ATP7AQ04656 1500 aa29.55■■■□□ 2.32
SPOCK3-220ENST00000512042 DNMT1P26358 1616 aaKnown RBP29.55■■■□□ 2.32
SPOCK3-220ENST00000512042 CDC42BPAQ5VT25 1732 aa29.54■■■□□ 2.32
SPOCK3-220ENST00000512042 TIAM1Q13009 1591 aa29.53■■■□□ 2.32
SPOCK3-220ENST00000512042 NEURL4Q96JN8 1562 aa29.49■■■□□ 2.31
SPOCK3-220ENST00000512042 SENP3Q9H4L4 574 aaPredicted RBP29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms