RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 CNTLNQ9NXG0 1405 aa13.52□□□□□ -0.24
POLR2J3-215ENST00000511313 FANCAO15360 1455 aa13.52□□□□□ -0.24
POLR2J3-215ENST00000511313 CEP170Q5SW79 1584 aa13.5□□□□□ -0.25
POLR2J3-215ENST00000511313 EHBP1L1Q8N3D4 1523 aa13.5□□□□□ -0.25
POLR2J3-215ENST00000511313 SCAPERQ9BY12 1400 aa13.49□□□□□ -0.25
POLR2J3-215ENST00000511313 CFAP74Q9C0B2 1584 aa13.49□□□□□ -0.25
POLR2J3-215ENST00000511313 SCAF1Q9H7N4 1312 aaKnown RBP13.48□□□□□ -0.25
POLR2J3-215ENST00000511313 NEO1Q92859 1461 aa13.48□□□□□ -0.25
POLR2J3-215ENST00000511313 MIA2Q96PC5 1412 aa13.48□□□□□ -0.25
POLR2J3-215ENST00000511313 KIF14Q15058 1648 aa13.48□□□□□ -0.25
POLR2J3-215ENST00000511313 ANKLE2Q86XL3 938 aa13.46□□□□□ -0.25
POLR2J3-215ENST00000511313 TONSLQ96HA7 1378 aa13.45□□□□□ -0.26
POLR2J3-215ENST00000511313 POGKQ9P215 609 aa13.45□□□□□ -0.26
POLR2J3-215ENST00000511313 ADGRL1O94910 1474 aa13.45□□□□□ -0.26
POLR2J3-215ENST00000511313 HNRNPMP52272 730 aaKnown RBP eCLIP13.44□□□□□ -0.26
POLR2J3-215ENST00000511313 RRP7BPQ9NSQ0 103 aa13.44□□□□□ -0.26
POLR2J3-215ENST00000511313 VGFO15240 615 aaPredicted RBP13.43□□□□□ -0.26
POLR2J3-215ENST00000511313 SLC52A1Q9NWF4 448 aa13.43□□□□□ -0.26
POLR2J3-215ENST00000511313 KIAA0556O60303 1618 aa13.39□□□□□ -0.27
POLR2J3-215ENST00000511313 MAGI2Q86UL8 1455 aa13.39□□□□□ -0.27
POLR2J3-215ENST00000511313 ZNF518AQ6AHZ1 1483 aa13.39□□□□□ -0.27
POLR2J3-215ENST00000511313 PPARGC1BQ86YN6 1023 aaKnown RBP13.38□□□□□ -0.27
POLR2J3-215ENST00000511313 EPRSP07814 1512 aaKnown RBP13.37□□□□□ -0.27
POLR2J3-215ENST00000511313 PLCH2O75038 1416 aa13.37□□□□□ -0.27
POLR2J3-215ENST00000511313 ABCC10Q5T3U5 1492 aa13.37□□□□□ -0.27
POLR2J3-215ENST00000511313 POLR3GLQ9BT43 218 aa13.36□□□□□ -0.27
POLR2J3-215ENST00000511313 RAPGEF6Q8TEU7 1601 aa13.36□□□□□ -0.27
POLR2J3-215ENST00000511313 CHD1O14646 1710 aa13.36□□□□□ -0.27
POLR2J3-215ENST00000511313 NUP155O75694 1391 aa13.36□□□□□ -0.27
POLR2J3-215ENST00000511313 EIF3AQ14152 1382 aaKnown RBP13.35□□□□□ -0.27
POLR2J3-215ENST00000511313 PKD2Q13563 968 aa13.35□□□□□ -0.27
POLR2J3-215ENST00000511313 ATF3P18847 181 aa13.35□□□□□ -0.27
POLR2J3-215ENST00000511313 NPM2Q86SE8 214 aaKnown RBP13.34□□□□□ -0.27
POLR2J3-215ENST00000511313 CTTNBP2Q8WZ74 1663 aa13.34□□□□□ -0.27
POLR2J3-215ENST00000511313 KIAA1107Q9UPP5 1409 aa13.33□□□□□ -0.27
POLR2J3-215ENST00000511313 TIMELESSQ9UNS1 1208 aa13.33□□□□□ -0.28
POLR2J3-215ENST00000511313 HRCP23327 699 aa13.33□□□□□ -0.28
POLR2J3-215ENST00000511313 PHF23Q9BUL5 403 aaPredicted RBP13.33□□□□□ -0.28
POLR2J3-215ENST00000511313 CCDC141Q6ZP82 1450 aa13.33□□□□□ -0.28
POLR2J3-215ENST00000511313 MAP3K1Q13233 1512 aa13.32□□□□□ -0.28
POLR2J3-215ENST00000511313 NCOA2Q15596 1464 aa13.32□□□□□ -0.28
POLR2J3-215ENST00000511313 SETD5Q9C0A6 1442 aa13.32□□□□□ -0.28
POLR2J3-215ENST00000511313 DCAF8L1A6NGE4 600 aa13.32□□□□□ -0.28
POLR2J3-215ENST00000511313 KIF15Q9NS87 1388 aa13.31□□□□□ -0.28
POLR2J3-215ENST00000511313 RUSC2Q8N2Y8 1516 aa13.31□□□□□ -0.28
POLR2J3-215ENST00000511313 RPGRIP1LQ68CZ1 1315 aa13.31□□□□□ -0.28
POLR2J3-215ENST00000511313 C9orf84Q5VXU9 1444 aa13.3□□□□□ -0.28
POLR2J3-215ENST00000511313 TOM1O60784 492 aa13.3□□□□□ -0.28
POLR2J3-215ENST00000511313 ARAP1Q96P48 1450 aa13.3□□□□□ -0.28
POLR2J3-215ENST00000511313 CLASP1Q7Z460 1538 aa13.3□□□□□ -0.28
POLR2J3-215ENST00000511313 MEX3CQ5U5Q3 659 aaKnown RBP13.3□□□□□ -0.28
POLR2J3-215ENST00000511313 NEUROD1Q13562 356 aa13.29□□□□□ -0.28
POLR2J3-215ENST00000511313 KDM5BQ9UGL1 1544 aa13.29□□□□□ -0.28
POLR2J3-215ENST00000511313 CLSPNQ9HAW4 1339 aa13.28□□□□□ -0.28
POLR2J3-215ENST00000511313 ATP10AO60312 1499 aa13.27□□□□□ -0.28
POLR2J3-215ENST00000511313 RIMBP3CA6NJZ7 1639 aa13.27□□□□□ -0.28
POLR2J3-215ENST00000511313 RIMBP3BA6NNM3 1639 aa13.27□□□□□ -0.28
POLR2J3-215ENST00000511313 RIMBP3Q9UFD9 1639 aa13.27□□□□□ -0.28
POLR2J3-215ENST00000511313 SUPT6HQ7KZ85 1726 aaKnown RBP13.27□□□□□ -0.28
POLR2J3-215ENST00000511313 ATP10BO94823 1461 aa13.27□□□□□ -0.29
POLR2J3-215ENST00000511313 UHRF1BP1Q6BDS2 1440 aa13.27□□□□□ -0.29
POLR2J3-215ENST00000511313 RAPGEF3O95398 923 aa13.27□□□□□ -0.29
POLR2J3-215ENST00000511313 MAPKBP1O60336 1514 aa13.26□□□□□ -0.29
POLR2J3-215ENST00000511313 MAGI3Q5TCQ9 1506 aa13.26□□□□□ -0.29
POLR2J3-215ENST00000511313 RTEL1-TNFRSF6BF6WH68 1400 aa13.25□□□□□ -0.29
POLR2J3-215ENST00000511313 PSME1Q06323 249 aa13.24□□□□□ -0.29
POLR2J3-215ENST00000511313 AFAP1Q8N556 730 aa13.24□□□□□ -0.29
POLR2J3-215ENST00000511313 LRRC9Q6ZRR7 1453 aa13.24□□□□□ -0.29
POLR2J3-215ENST00000511313 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.24□□□□□ -0.29
POLR2J3-215ENST00000511313 TXNDC2Q86VQ3 553 aa13.24□□□□□ -0.29
POLR2J3-215ENST00000511313 FAM135AQ9P2D6 1515 aa13.23□□□□□ -0.29
POLR2J3-215ENST00000511313 KDM6BO15054 1643 aa13.23□□□□□ -0.29
POLR2J3-215ENST00000511313 DHX29Q7Z478 1369 aaKnown RBP13.23□□□□□ -0.29
POLR2J3-215ENST00000511313 FGD6Q6ZV73 1430 aa13.23□□□□□ -0.29
POLR2J3-215ENST00000511313 PROSER2Q86WR7 435 aaPredicted RBP13.22□□□□□ -0.29
POLR2J3-215ENST00000511313 HDGFL2Q7Z4V5 671 aaPredicted RBP13.22□□□□□ -0.29
POLR2J3-215ENST00000511313 HFM1A2PYH4 1435 aa13.22□□□□□ -0.29
POLR2J3-215ENST00000511313 CCDC144AA2RUR9 1427 aa13.21□□□□□ -0.29
POLR2J3-215ENST00000511313 PELP1Q8IZL8 1130 aaKnown RBP13.21□□□□□ -0.3
POLR2J3-215ENST00000511313 ANKRD50Q9ULJ7 1429 aa13.21□□□□□ -0.3
POLR2J3-215ENST00000511313 TNRQ92752 1358 aa13.21□□□□□ -0.3
POLR2J3-215ENST00000511313 ITSN2Q9NZM3 1697 aa13.21□□□□□ -0.3
POLR2J3-215ENST00000511313 CHMP4AQ9BY43 222 aa13.2□□□□□ -0.3
POLR2J3-215ENST00000511313 RRBP1Q9P2E9 1410 aaKnown RBP13.2□□□□□ -0.3
POLR2J3-215ENST00000511313 PNNQ9H307 717 aaKnown RBP13.19□□□□□ -0.3
POLR2J3-215ENST00000511313 ZFYVE16Q7Z3T8 1539 aa13.19□□□□□ -0.3
POLR2J3-215ENST00000511313 A0A0G2JS52 829 aa13.19□□□□□ -0.3
POLR2J3-215ENST00000511313 MYT1Q01538 1121 aa13.19□□□□□ -0.3
POLR2J3-215ENST00000511313 DHX57Q6P158 1386 aaKnown RBP13.18□□□□□ -0.3
POLR2J3-215ENST00000511313 LRPPRCP42704 1394 aaKnown RBP13.18□□□□□ -0.3
POLR2J3-215ENST00000511313 DISP1Q96F81 1524 aa13.18□□□□□ -0.3
POLR2J3-215ENST00000511313 LMOD2Q6P5Q4 547 aa13.17□□□□□ -0.3
POLR2J3-215ENST00000511313 CFAP53Q96M91 514 aa13.17□□□□□ -0.3
POLR2J3-215ENST00000511313 ROCK1Q13464 1354 aa13.17□□□□□ -0.3
POLR2J3-215ENST00000511313 RGL3Q3MIN7 710 aa13.17□□□□□ -0.3
POLR2J3-215ENST00000511313 KDM2AQ9Y2K7 1162 aa13.17□□□□□ -0.3
POLR2J3-215ENST00000511313 ARAP3Q8WWN8 1544 aa13.17□□□□□ -0.3
POLR2J3-215ENST00000511313 A2MP01023 1474 aa13.17□□□□□ -0.3
POLR2J3-215ENST00000511313 EIF4G2P78344 907 aaKnown RBP eCLIP13.16□□□□□ -0.3
POLR2J3-215ENST00000511313 SF3B2Q13435 895 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms