RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 RAD54L2Q9Y4B4 1467 aa9.38□□□□□ -0.91
KDM3B-207ENST00000510866 NUTM2DQ5VT03 806 aaPredicted RBP9.38□□□□□ -0.91
KDM3B-207ENST00000510866 HDGFL2Q7Z4V5 671 aaPredicted RBP9.38□□□□□ -0.91
KDM3B-207ENST00000510866 PNNQ9H307 717 aaKnown RBP9.38□□□□□ -0.91
KDM3B-207ENST00000510866 FTSJ3Q8IY81 847 aaKnown RBP9.37□□□□□ -0.91
KDM3B-207ENST00000510866 MORC1Q86VD1 984 aa9.37□□□□□ -0.91
KDM3B-207ENST00000510866 MPHOSPH9Q99550 1183 aa9.37□□□□□ -0.91
KDM3B-207ENST00000510866 RSPH4AQ5TD94 716 aa9.36□□□□□ -0.91
KDM3B-207ENST00000510866 ANP32BQ92688 251 aaKnown RBP9.36□□□□□ -0.91
KDM3B-207ENST00000510866 ROCK2O75116 1388 aaKnown RBP9.35□□□□□ -0.91
KDM3B-207ENST00000510866 CSB-PGBD3P0DP91 1061 aa9.34□□□□□ -0.91
KDM3B-207ENST00000510866 NCAPD3P42695 1498 aa9.34□□□□□ -0.91
KDM3B-207ENST00000510866 AQRO60306 1485 aaKnown RBP eCLIP9.34□□□□□ -0.913e-7■■■■■ 30.3
KDM3B-207ENST00000510866 FAM69CQ0P6D2 419 aa9.33□□□□□ -0.92
KDM3B-207ENST00000510866 CC2D2AQ9P2K1 1620 aa9.33□□□□□ -0.92
KDM3B-207ENST00000510866 CCDC9Q9Y3X0 531 aaKnown RBP9.33□□□□□ -0.92
KDM3B-207ENST00000510866 RAB3GAP2Q9H2M9 1393 aa9.32□□□□□ -0.92
KDM3B-207ENST00000510866 RUSC2Q8N2Y8 1516 aa9.32□□□□□ -0.92
KDM3B-207ENST00000510866 HSPA5P11021 654 aaKnown RBP9.32□□□□□ -0.92
KDM3B-207ENST00000510866 AEBP2Q6ZN18 517 aaPredicted RBP9.32□□□□□ -0.92
KDM3B-207ENST00000510866 FRAT1Q92837 279 aaPredicted RBP9.31□□□□□ -0.92
KDM3B-207ENST00000510866 EIF3AQ14152 1382 aaKnown RBP9.31□□□□□ -0.92
KDM3B-207ENST00000510866 PRDM2Q13029 1718 aa9.31□□□□□ -0.92
KDM3B-207ENST00000510866 RTF1Q92541 710 aaKnown RBP9.31□□□□□ -0.92
KDM3B-207ENST00000510866 OS9Q13438 667 aaPredicted RBP9.3□□□□□ -0.92
KDM3B-207ENST00000510866 TIMELESSQ9UNS1 1208 aa9.3□□□□□ -0.92
KDM3B-207ENST00000510866 CASC1Q6TDU7 716 aa9.29□□□□□ -0.92
KDM3B-207ENST00000510866 NGDNQ8NEJ9 315 aaKnown RBP9.28□□□□□ -0.92
KDM3B-207ENST00000510866 MRC2Q9UBG0 1479 aa9.28□□□□□ -0.92
KDM3B-207ENST00000510866 NESP48681 1621 aa9.28□□□□□ -0.92
KDM3B-207ENST00000510866 NUTM2FA1L443 756 aa9.27□□□□□ -0.92
KDM3B-207ENST00000510866 IGF1RP08069 1367 aa9.27□□□□□ -0.93
KDM3B-207ENST00000510866 KTN1Q86UP2 1357 aaKnown RBP9.27□□□□□ -0.93
KDM3B-207ENST00000510866 GOLGA2Q08379 1002 aa9.27□□□□□ -0.93
KDM3B-207ENST00000510866 GRIN2BQ13224 1484 aa9.26□□□□□ -0.93
KDM3B-207ENST00000510866 CHMP4BQ9H444 224 aaKnown RBP9.25□□□□□ -0.93
KDM3B-207ENST00000510866 TERF2IPQ9NYB0 399 aa9.25□□□□□ -0.93
KDM3B-207ENST00000510866 MS4A1P11836 297 aa9.25□□□□□ -0.93
KDM3B-207ENST00000510866 ZNF330Q9Y3S2 320 aaPredicted RBP9.25□□□□□ -0.93
KDM3B-207ENST00000510866 TRAK1Q9UPV9 953 aa9.24□□□□□ -0.93
KDM3B-207ENST00000510866 SUPT16HQ9Y5B9 1047 aaKnown RBP9.24□□□□□ -0.93
KDM3B-207ENST00000510866 CCDC144AA2RUR9 1427 aa9.23□□□□□ -0.93
KDM3B-207ENST00000510866 U2AF1L5P0DN76 240 aaPredicted RBP9.23□□□□□ -0.93
KDM3B-207ENST00000510866 U2AF1Q01081 240 aaKnown RBP eCLIP9.23□□□□□ -0.931e-7■■■□□ 14.6
KDM3B-207ENST00000510866 NBR1Q14596 966 aa9.23□□□□□ -0.93
KDM3B-207ENST00000510866 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.23□□□□□ -0.93
KDM3B-207ENST00000510866 UACAQ9BZF9 1416 aa9.23□□□□□ -0.93
KDM3B-207ENST00000510866 IFT140Q96RY7 1462 aa9.22□□□□□ -0.93
KDM3B-207ENST00000510866 L3MBTL2Q969R5 705 aa9.22□□□□□ -0.93
KDM3B-207ENST00000510866 AMPHP49418 695 aa9.21□□□□□ -0.93
KDM3B-207ENST00000510866 BECN1Q14457 450 aa9.21□□□□□ -0.93
KDM3B-207ENST00000510866 LTV1Q96GA3 475 aaPredicted RBP9.21□□□□□ -0.93
KDM3B-207ENST00000510866 PRG4Q92954 1404 aaPredicted RBP9.21□□□□□ -0.94
KDM3B-207ENST00000510866 VGFO15240 615 aaPredicted RBP9.21□□□□□ -0.94
KDM3B-207ENST00000510866 TAOK2Q9UL54 1235 aa9.21□□□□□ -0.94
KDM3B-207ENST00000510866 CFTRP13569 1480 aa9.2□□□□□ -0.94
KDM3B-207ENST00000510866 NCLP19338 710 aaKnown RBP9.2□□□□□ -0.94
KDM3B-207ENST00000510866 CALD1Q05682 793 aaKnown RBP9.19□□□□□ -0.94
KDM3B-207ENST00000510866 ARHGAP5Q13017 1502 aa9.19□□□□□ -0.94
KDM3B-207ENST00000510866 CDK11BP21127 795 aaKnown RBP9.18□□□□□ -0.94
KDM3B-207ENST00000510866 RGS3P49796 1198 aa9.18□□□□□ -0.94
KDM3B-207ENST00000510866 RALBP1Q15311 655 aa9.18□□□□□ -0.94
KDM3B-207ENST00000510866 HMGXB3Q12766 1538 aa9.18□□□□□ -0.94
KDM3B-207ENST00000510866 DDRGK1Q96HY6 314 aa9.18□□□□□ -0.94
KDM3B-207ENST00000510866 KCNJ4P48050 445 aa9.18□□□□□ -0.94
KDM3B-207ENST00000510866 SNAPC4Q5SXM2 1469 aa9.17□□□□□ -0.94
KDM3B-207ENST00000510866 TULP1O00294 542 aaPredicted RBP9.17□□□□□ -0.94
KDM3B-207ENST00000510866 EVA1CP58658 441 aa9.17□□□□□ -0.94
KDM3B-207ENST00000510866 MEX3CQ5U5Q3 659 aaKnown RBP9.17□□□□□ -0.94
KDM3B-207ENST00000510866 TMX4Q9H1E5 349 aaPredicted RBP9.17□□□□□ -0.94
KDM3B-207ENST00000510866 CUX1P39880 1505 aa9.17□□□□□ -0.94
KDM3B-207ENST00000510866 MYOM3Q5VTT5 1437 aa9.17□□□□□ -0.94
KDM3B-207ENST00000510866 FGD1P98174 961 aa9.17□□□□□ -0.94
KDM3B-207ENST00000510866 TPRNQ4KMQ1 711 aa9.16□□□□□ -0.94
KDM3B-207ENST00000510866 NAP1L2Q9ULW6 460 aaPredicted RBP9.16□□□□□ -0.94
KDM3B-207ENST00000510866 SYNJ2O15056 1496 aa9.16□□□□□ -0.94
KDM3B-207ENST00000510866 TOPBP1Q92547 1522 aa9.16□□□□□ -0.94
KDM3B-207ENST00000510866 MINK1Q8N4C8 1332 aaPredicted RBP9.16□□□□□ -0.94
KDM3B-207ENST00000510866 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.16□□□□□ -0.94
KDM3B-207ENST00000510866 ZNF644Q9H582 1327 aaPredicted RBP9.16□□□□□ -0.94
KDM3B-207ENST00000510866 EVC2Q86UK5 1308 aa9.15□□□□□ -0.94
KDM3B-207ENST00000510866 IPO8O15397 1037 aaKnown RBP9.15□□□□□ -0.95
KDM3B-207ENST00000510866 CCER2I3L3R5 266 aa9.14□□□□□ -0.95
KDM3B-207ENST00000510866 COG3Q96JB2 828 aa9.14□□□□□ -0.95
KDM3B-207ENST00000510866 KIF15Q9NS87 1388 aa9.14□□□□□ -0.95
KDM3B-207ENST00000510866 STK31Q9BXU1 1019 aa9.14□□□□□ -0.95
KDM3B-207ENST00000510866 APBB1O00213 710 aa9.14□□□□□ -0.95
KDM3B-207ENST00000510866 GOLGA6L22H0YM25 854 aa9.13□□□□□ -0.95
KDM3B-207ENST00000510866 AMER1Q5JTC6 1135 aaPredicted RBP9.13□□□□□ -0.95
KDM3B-207ENST00000510866 CCDC146Q8IYE0 955 aa9.13□□□□□ -0.95
KDM3B-207ENST00000510866 SYNJ1O43426 1573 aa9.13□□□□□ -0.95
KDM3B-207ENST00000510866 ZRSR1Q15695 479 aaKnown RBP9.13□□□□□ -0.95
KDM3B-207ENST00000510866 ISY1Q9ULR0 285 aaKnown RBP9.13□□□□□ -0.95
KDM3B-207ENST00000510866 CHMP3Q9Y3E7 222 aa9.13□□□□□ -0.95
KDM3B-207ENST00000510866 PSME1Q06323 249 aa9.13□□□□□ -0.95
KDM3B-207ENST00000510866 PPP4R2Q9NY27 417 aa9.13□□□□□ -0.95
KDM3B-207ENST00000510866 POLA1P09884 1462 aaPredicted RBP9.12□□□□□ -0.95
KDM3B-207ENST00000510866 ST20-MTHFSA0A0A6YYL1 179 aa9.12□□□□□ -0.95
KDM3B-207ENST00000510866 CHMP4AQ9BY43 222 aa9.12□□□□□ -0.95
KDM3B-207ENST00000510866 ATF3P18847 181 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms