RNA–Protein interactions for RNA: ENST00000510576.6

CLMAT3-201, colorectal liver metastasis associated transcript 3, humanhuman

TSL 1 (best) BASIC

Gene CLMAT3, Length 1,973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-201ENST00000510576 CHD1O14646 1710 aa23.71■■□□□ 1.39
CLMAT3-201ENST00000510576 KIF14Q15058 1648 aa23.71■■□□□ 1.39
CLMAT3-201ENST00000510576 ABCC5O15440 1437 aa23.71■■□□□ 1.39
CLMAT3-201ENST00000510576 TRIM52Q96A61 297 aa23.69■■□□□ 1.38
CLMAT3-201ENST00000510576 CAMSAP2Q08AD1 1489 aa23.67■■□□□ 1.38
CLMAT3-201ENST00000510576 DENND4BO75064 1496 aaPredicted RBP23.67■■□□□ 1.38
CLMAT3-201ENST00000510576 ADGBQ8N7X0 1667 aa23.67■■□□□ 1.38
CLMAT3-201ENST00000510576 ZNF644Q9H582 1327 aaPredicted RBP23.66■■□□□ 1.38
CLMAT3-201ENST00000510576 GPATCH8Q9UKJ3 1502 aaKnown RBP23.65■■□□□ 1.38
CLMAT3-201ENST00000510576 CROCC2H7BZ55 1655 aa23.64■■□□□ 1.37
CLMAT3-201ENST00000510576 CFDP1Q9UEE9 299 aaPredicted RBP23.62■■□□□ 1.37
CLMAT3-201ENST00000510576 KDM5BQ9UGL1 1544 aa23.62■■□□□ 1.37
CLMAT3-201ENST00000510576 MPHOSPH9Q99550 1183 aa23.6■■□□□ 1.37
CLMAT3-201ENST00000510576 CDC42BPAQ5VT25 1732 aa23.6■■□□□ 1.37
CLMAT3-201ENST00000510576 ATP10BO94823 1461 aa23.58■■□□□ 1.37
CLMAT3-201ENST00000510576 PLEKHD1A6NEE1 506 aa23.56■■□□□ 1.36
CLMAT3-201ENST00000510576 DDX10Q13206 875 aaKnown RBP23.56■■□□□ 1.36
CLMAT3-201ENST00000510576 ADGRL2O95490 1459 aa23.54■■□□□ 1.36
CLMAT3-201ENST00000510576 ABCC10Q5T3U5 1492 aa23.54■■□□□ 1.36
CLMAT3-201ENST00000510576 PTPRGP23470 1445 aa23.53■■□□□ 1.36
CLMAT3-201ENST00000510576 HIRIP3Q9BW71 556 aaPredicted RBP23.52■■□□□ 1.36
CLMAT3-201ENST00000510576 ZNF777Q9ULD5 760 aaPredicted RBP23.51■■□□□ 1.35
CLMAT3-201ENST00000510576 SHROOM2Q13796 1616 aa23.51■■□□□ 1.35
CLMAT3-201ENST00000510576 NCOA1Q15788 1441 aa23.5■■□□□ 1.35
CLMAT3-201ENST00000510576 OSCARQ8IYS5 282 aa23.5■■□□□ 1.35
CLMAT3-201ENST00000510576 CLASP1Q7Z460 1538 aa23.47■■□□□ 1.35
CLMAT3-201ENST00000510576 ANKRD30BQ9BXX2 1392 aa23.47■■□□□ 1.35
CLMAT3-201ENST00000510576 ANKRD30AQ9BXX3 1397 aa23.46■■□□□ 1.35
CLMAT3-201ENST00000510576 SHANK2Q9UPX8 1470 aa23.45■■□□□ 1.35
CLMAT3-201ENST00000510576 RPRD2Q5VT52 1461 aaKnown RBP23.45■■□□□ 1.34
CLMAT3-201ENST00000510576 FOXD1Q16676 465 aa23.45■■□□□ 1.34
CLMAT3-201ENST00000510576 SLC4A1APQ9BWU0 796 aaKnown RBP23.44■■□□□ 1.34
CLMAT3-201ENST00000510576 PZPP20742 1482 aa23.43■■□□□ 1.34
CLMAT3-201ENST00000510576 PREX2Q70Z35 1606 aa23.4■■□□□ 1.34
CLMAT3-201ENST00000510576 ARHGEF5Q12774 1597 aa23.39■■□□□ 1.34
CLMAT3-201ENST00000510576 L3MBTL2Q969R5 705 aa23.39■■□□□ 1.33
CLMAT3-201ENST00000510576 C9orf84Q5VXU9 1444 aa23.39■■□□□ 1.33
CLMAT3-201ENST00000510576 TEX14Q8IWB6 1497 aa23.38■■□□□ 1.33
CLMAT3-201ENST00000510576 CDC42BPBQ9Y5S2 1711 aa23.38■■□□□ 1.33
CLMAT3-201ENST00000510576 ANKRD50Q9ULJ7 1429 aa23.36■■□□□ 1.33
CLMAT3-201ENST00000510576 ANP32CO43423 234 aa23.36■■□□□ 1.33
CLMAT3-201ENST00000510576 KCNH8Q96L42 1107 aa23.34■■□□□ 1.33
CLMAT3-201ENST00000510576 KIAA1107Q9UPP5 1409 aa23.34■■□□□ 1.33
CLMAT3-201ENST00000510576 HSPA5P11021 654 aaKnown RBP23.33■■□□□ 1.33
CLMAT3-201ENST00000510576 SAMD9LQ8IVG5 1584 aa23.33■■□□□ 1.33
CLMAT3-201ENST00000510576 ERCC6L2Q5T890 1561 aa23.32■■□□□ 1.32
CLMAT3-201ENST00000510576 ABCC2Q92887 1545 aa23.32■■□□□ 1.32
CLMAT3-201ENST00000510576 CCER2I3L3R5 266 aa23.32■■□□□ 1.32
CLMAT3-201ENST00000510576 EIF4G2P78344 907 aaKnown RBP eCLIP23.31■■□□□ 1.32
CLMAT3-201ENST00000510576 TSPY4P0CV99 314 aa23.31■■□□□ 1.32
CLMAT3-201ENST00000510576 TSPY10P0CW01 314 aa23.31■■□□□ 1.32
CLMAT3-201ENST00000510576 MBD5Q9P267 1494 aa23.29■■□□□ 1.32
CLMAT3-201ENST00000510576 CCDC141Q6ZP82 1450 aa23.28■■□□□ 1.32
CLMAT3-201ENST00000510576 KDM5DQ9BY66 1539 aa23.28■■□□□ 1.32
CLMAT3-201ENST00000510576 TTC37Q6PGP7 1564 aa23.28■■□□□ 1.32
CLMAT3-201ENST00000510576 MYO5CQ9NQX4 1742 aa23.27■■□□□ 1.32
CLMAT3-201ENST00000510576 HNRNPMP52272 730 aaKnown RBP eCLIP23.25■■□□□ 1.31
CLMAT3-201ENST00000510576 KIF15Q9NS87 1388 aa23.25■■□□□ 1.31
CLMAT3-201ENST00000510576 PKD2Q13563 968 aa23.25■■□□□ 1.31
CLMAT3-201ENST00000510576 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.25■■□□□ 1.31
CLMAT3-201ENST00000510576 ARHGAP5Q13017 1502 aa23.24■■□□□ 1.31
CLMAT3-201ENST00000510576 NBPF8Q3BBV2 869 aa23.23■■□□□ 1.31
CLMAT3-201ENST00000510576 PELP1Q8IZL8 1130 aaKnown RBP23.23■■□□□ 1.31
CLMAT3-201ENST00000510576 WASHC2AQ641Q2 1341 aa23.23■■□□□ 1.31
CLMAT3-201ENST00000510576 RSPH4AQ5TD94 716 aa23.22■■□□□ 1.31
CLMAT3-201ENST00000510576 NUP155O75694 1391 aa23.22■■□□□ 1.31
CLMAT3-201ENST00000510576 POLR1AO95602 1720 aaPredicted RBP23.22■■□□□ 1.31
CLMAT3-201ENST00000510576 SYCP2Q9BX26 1530 aa23.21■■□□□ 1.31
CLMAT3-201ENST00000510576 MAST1Q9Y2H9 1570 aa23.2■■□□□ 1.31
CLMAT3-201ENST00000510576 ZCCHC11Q5TAX3 1644 aaKnown RBP23.2■■□□□ 1.3
CLMAT3-201ENST00000510576 UHRF1BP1LA0JNW5 1464 aa23.16■■□□□ 1.3
CLMAT3-201ENST00000510576 PLEKHH2Q8IVE3 1493 aa23.16■■□□□ 1.3
CLMAT3-201ENST00000510576 CNTLNQ9NXG0 1405 aa23.15■■□□□ 1.3
CLMAT3-201ENST00000510576 CCDC7Q96M83 1385 aa23.14■■□□□ 1.29
CLMAT3-201ENST00000510576 SPATA31E1Q6ZUB1 1445 aa23.13■■□□□ 1.29
CLMAT3-201ENST00000510576 PLXNC1O60486 1568 aa23.12■■□□□ 1.29
CLMAT3-201ENST00000510576 ARHGEF12Q9NZN5 1544 aa23.11■■□□□ 1.29
CLMAT3-201ENST00000510576 UNC13BO14795 1591 aa23.1■■□□□ 1.29
CLMAT3-201ENST00000510576 RIMBP3CA6NJZ7 1639 aa23.1■■□□□ 1.29
CLMAT3-201ENST00000510576 RIMBP3BA6NNM3 1639 aa23.1■■□□□ 1.29
CLMAT3-201ENST00000510576 RIMBP3Q9UFD9 1639 aa23.1■■□□□ 1.29
CLMAT3-201ENST00000510576 FAM135AQ9P2D6 1515 aa23.1■■□□□ 1.29
CLMAT3-201ENST00000510576 C11orf95C9JLR9 678 aaPredicted RBP23.07■■□□□ 1.28
CLMAT3-201ENST00000510576 DNAJC5Q9H3Z4 198 aa23.07■■□□□ 1.28
CLMAT3-201ENST00000510576 UHRF1BP1Q6BDS2 1440 aa23.06■■□□□ 1.28
CLMAT3-201ENST00000510576 SUPT16HQ9Y5B9 1047 aaKnown RBP23.05■■□□□ 1.28
CLMAT3-201ENST00000510576 PLCH2O75038 1416 aa23.05■■□□□ 1.28
CLMAT3-201ENST00000510576 KDM5CP41229 1560 aa23.04■■□□□ 1.28
CLMAT3-201ENST00000510576 RALGAPBQ86X10 1494 aa23.03■■□□□ 1.28
CLMAT3-201ENST00000510576 ZNF326Q5BKZ1 582 aaKnown RBP23.03■■□□□ 1.28
CLMAT3-201ENST00000510576 KIF7Q2M1P5 1343 aa23.02■■□□□ 1.28
CLMAT3-201ENST00000510576 ABCC1P33527 1531 aa23.01■■□□□ 1.27
CLMAT3-201ENST00000510576 DUOX2Q9NRD8 1548 aa23.01■■□□□ 1.27
CLMAT3-201ENST00000510576 IQGAP3Q86VI3 1631 aa23.01■■□□□ 1.27
CLMAT3-201ENST00000510576 USP47Q96K76 1375 aa23.01■■□□□ 1.27
CLMAT3-201ENST00000510576 EFCAB2Q5VUJ9 269 aa23■■□□□ 1.27
CLMAT3-201ENST00000510576 BCORL1Q5H9F3 1711 aa22.98■■□□□ 1.27
CLMAT3-201ENST00000510576 ARAP3Q8WWN8 1544 aa22.96■■□□□ 1.27
CLMAT3-201ENST00000510576 ERBINQ96RT1 1412 aa22.96■■□□□ 1.27
CLMAT3-201ENST00000510576 CYB5RLQ6IPT4 315 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms