RNA–Protein interactions for RNA: ENST00000509013.2

SSBP2-211, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-211ENST00000509013 RAPGEF6Q8TEU7 1601 aa10.15□□□□□ -0.79
SSBP2-211ENST00000509013 MLECQ14165 292 aa10.14□□□□□ -0.79
SSBP2-211ENST00000509013 CERKQ8TCT0 537 aa10.14□□□□□ -0.79
SSBP2-211ENST00000509013 NUP153P49790 1475 aaKnown RBP10.14□□□□□ -0.79
SSBP2-211ENST00000509013 FHOD3Q2V2M9 1422 aa10.14□□□□□ -0.79
SSBP2-211ENST00000509013 SAMD9Q5K651 1589 aa10.13□□□□□ -0.79
SSBP2-211ENST00000509013 ARHGEF40Q8TER5 1519 aa10.12□□□□□ -0.79
SSBP2-211ENST00000509013 FANCAO15360 1455 aa10.11□□□□□ -0.79
SSBP2-211ENST00000509013 RIMS1Q86UR5 1692 aaKnown RBP10.11□□□□□ -0.79
SSBP2-211ENST00000509013 YEATS2Q9ULM3 1422 aa10.1□□□□□ -0.79
SSBP2-211ENST00000509013 ZFYVE16Q7Z3T8 1539 aa10.08□□□□□ -0.8
SSBP2-211ENST00000509013 NPM3O75607 178 aaKnown RBP10.08□□□□□ -0.8
SSBP2-211ENST00000509013 MAGI2Q86UL8 1455 aa10.08□□□□□ -0.8
SSBP2-211ENST00000509013 EFCAB5A4FU69 1503 aa10.07□□□□□ -0.8
SSBP2-211ENST00000509013 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.07□□□□□ -0.8
SSBP2-211ENST00000509013 RICTORQ6R327 1708 aa10.07□□□□□ -0.8
SSBP2-211ENST00000509013 ZMYM4Q5VZL5 1548 aa10.07□□□□□ -0.8
SSBP2-211ENST00000509013 SCAPERQ9BY12 1400 aa10.07□□□□□ -0.8
SSBP2-211ENST00000509013 CFAP74Q9C0B2 1584 aa10.06□□□□□ -0.8
SSBP2-211ENST00000509013 DISP3Q9P2K9 1392 aa10.05□□□□□ -0.8
SSBP2-211ENST00000509013 CEBPAP49715 358 aaPredicted RBP10.05□□□□□ -0.8
SSBP2-211ENST00000509013 PLCH2O75038 1416 aa10.05□□□□□ -0.8
SSBP2-211ENST00000509013 HECW1Q76N89 1606 aa10.04□□□□□ -0.8
SSBP2-211ENST00000509013 EFCAB2Q5VUJ9 269 aa10.04□□□□□ -0.8
SSBP2-211ENST00000509013 ILDR2Q71H61 639 aa10.04□□□□□ -0.8
SSBP2-211ENST00000509013 TTC37Q6PGP7 1564 aa10.04□□□□□ -0.8
SSBP2-211ENST00000509013 ATP10AO60312 1499 aa10.04□□□□□ -0.8
SSBP2-211ENST00000509013 SIGLEC1Q9BZZ2 1709 aa10.03□□□□□ -0.8
SSBP2-211ENST00000509013 ATP1B4Q9UN42 357 aaPredicted RBP10.03□□□□□ -0.8
SSBP2-211ENST00000509013 C9orf84Q5VXU9 1444 aa10.02□□□□□ -0.81
SSBP2-211ENST00000509013 SOCS7O14512 581 aa10.02□□□□□ -0.81
SSBP2-211ENST00000509013 MYT1LQ9UL68 1186 aa10.02□□□□□ -0.81
SSBP2-211ENST00000509013 CDK13Q14004 1512 aaKnown RBP10.02□□□□□ -0.81
SSBP2-211ENST00000509013 ARHGEF12Q9NZN5 1544 aa10.02□□□□□ -0.81
SSBP2-211ENST00000509013 EEA1Q15075 1411 aa10.01□□□□□ -0.81
SSBP2-211ENST00000509013 CDK11AQ9UQ88 783 aaPredicted RBP10.01□□□□□ -0.81
SSBP2-211ENST00000509013 UHRF1BP1Q6BDS2 1440 aa10□□□□□ -0.81
SSBP2-211ENST00000509013 AFAP1Q8N556 730 aa10□□□□□ -0.81
SSBP2-211ENST00000509013 FER1L4A9Z1Z3 1794 aa10□□□□□ -0.81
SSBP2-211ENST00000509013 ESF1Q9H501 851 aaKnown RBP9.98□□□□□ -0.81
SSBP2-211ENST00000509013 ZNF518AQ6AHZ1 1483 aa9.98□□□□□ -0.81
SSBP2-211ENST00000509013 PREX1Q8TCU6 1659 aa9.97□□□□□ -0.81
SSBP2-211ENST00000509013 EHMT2Q96KQ7 1210 aa9.97□□□□□ -0.81
SSBP2-211ENST00000509013 U3KPZ7 1027 aaPredicted RBP9.97□□□□□ -0.81
SSBP2-211ENST00000509013 PTPRTO14522 1441 aa9.96□□□□□ -0.82
SSBP2-211ENST00000509013 FMN1Q68DA7 1419 aa9.96□□□□□ -0.82
SSBP2-211ENST00000509013 UBTFP17480 764 aaKnown RBP9.95□□□□□ -0.82
SSBP2-211ENST00000509013 ARHGAP5Q13017 1502 aa9.94□□□□□ -0.82
SSBP2-211ENST00000509013 TROQ12816 1431 aaPredicted RBP9.93□□□□□ -0.82
SSBP2-211ENST00000509013 POTEHQ6S545 545 aa9.93□□□□□ -0.82
SSBP2-211ENST00000509013 STRCQ7RTU9 1775 aa9.93□□□□□ -0.82
SSBP2-211ENST00000509013 CLIP1P30622 1438 aa9.92□□□□□ -0.82
SSBP2-211ENST00000509013 TRAPPC8Q9Y2L5 1435 aa9.92□□□□□ -0.82
SSBP2-211ENST00000509013 SPINK5Q9NQ38 1064 aaPredicted RBP9.92□□□□□ -0.82
SSBP2-211ENST00000509013 KDM5CP41229 1560 aa9.92□□□□□ -0.82
SSBP2-211ENST00000509013 CAPN15O75808 1086 aa9.91□□□□□ -0.82
SSBP2-211ENST00000509013 DSG3P32926 999 aa9.91□□□□□ -0.82
SSBP2-211ENST00000509013 KIF14Q15058 1648 aa9.91□□□□□ -0.82
SSBP2-211ENST00000509013 DIP2CQ9Y2E4 1556 aa9.91□□□□□ -0.82
SSBP2-211ENST00000509013 MLH3Q9UHC1 1453 aa9.91□□□□□ -0.82
SSBP2-211ENST00000509013 MYO5CQ9NQX4 1742 aa9.9□□□□□ -0.82
SSBP2-211ENST00000509013 SPATA31D1Q6ZQQ2 1576 aa9.9□□□□□ -0.82
SSBP2-211ENST00000509013 ARHGAP35Q9NRY4 1499 aa9.9□□□□□ -0.83
SSBP2-211ENST00000509013 REREQ9P2R6 1566 aa9.89□□□□□ -0.83
SSBP2-211ENST00000509013 IQSEC2Q5JU85 1478 aa9.89□□□□□ -0.83
SSBP2-211ENST00000509013 NCOA1Q15788 1441 aa9.89□□□□□ -0.83
SSBP2-211ENST00000509013 CNTLNQ9NXG0 1405 aa9.89□□□□□ -0.83
SSBP2-211ENST00000509013 LTBP4Q8N2S1 1624 aa9.89□□□□□ -0.83
SSBP2-211ENST00000509013 AGLP35573 1532 aa9.88□□□□□ -0.83
SSBP2-211ENST00000509013 NCKAP5LQ9HCH0 1330 aa9.87□□□□□ -0.83
SSBP2-211ENST00000509013 ABCA6Q8N139 1617 aa9.87□□□□□ -0.83
SSBP2-211ENST00000509013 UBAP1LF5GYI3 381 aa9.87□□□□□ -0.83
SSBP2-211ENST00000509013 C3P01024 1663 aa9.87□□□□□ -0.83
SSBP2-211ENST00000509013 SETD1BQ9UPS6 1966 aaKnown RBP9.86□□□□□ -0.83
SSBP2-211ENST00000509013 ZMYM3Q14202 1370 aa9.86□□□□□ -0.83
SSBP2-211ENST00000509013 ZNF335Q9H4Z2 1342 aaPredicted RBP9.85□□□□□ -0.83
SSBP2-211ENST00000509013 NPATQ14207 1427 aa9.85□□□□□ -0.83
SSBP2-211ENST00000509013 ZNF777Q9ULD5 760 aaPredicted RBP9.85□□□□□ -0.83
SSBP2-211ENST00000509013 ABCC1P33527 1531 aa9.84□□□□□ -0.83
SSBP2-211ENST00000509013 PKD2Q13563 968 aa9.84□□□□□ -0.83
SSBP2-211ENST00000509013 CAMSAP1Q5T5Y3 1602 aa9.84□□□□□ -0.83
SSBP2-211ENST00000509013 SPAG9O60271 1321 aaKnown RBP9.83□□□□□ -0.84
SSBP2-211ENST00000509013 HNRNPMP52272 730 aaKnown RBP eCLIP9.83□□□□□ -0.841e-6■■■■□ 22.8
SSBP2-211ENST00000509013 CDC42BPBQ9Y5S2 1711 aa9.82□□□□□ -0.84
SSBP2-211ENST00000509013 GGT6Q6P531 493 aa9.82□□□□□ -0.84
SSBP2-211ENST00000509013 CCDC18Q5T9S5 1454 aa9.82□□□□□ -0.84
SSBP2-211ENST00000509013 CASKIN1Q8WXD9 1431 aa9.82□□□□□ -0.84
SSBP2-211ENST00000509013 PREX2Q70Z35 1606 aa9.81□□□□□ -0.84
SSBP2-211ENST00000509013 KIDINS220Q9ULH0 1771 aa9.8□□□□□ -0.84
SSBP2-211ENST00000509013 ITSN2Q9NZM3 1697 aa9.8□□□□□ -0.84
SSBP2-211ENST00000509013 SAMD9LQ8IVG5 1584 aa9.8□□□□□ -0.84
SSBP2-211ENST00000509013 PLA2R1Q13018 1463 aa9.79□□□□□ -0.84
SSBP2-211ENST00000509013 CFDP1Q9UEE9 299 aaPredicted RBP9.79□□□□□ -0.84
SSBP2-211ENST00000509013 PTPRKQ15262 1439 aa9.78□□□□□ -0.84
SSBP2-211ENST00000509013 LRRIQ1Q96JM4 1722 aa9.78□□□□□ -0.84
SSBP2-211ENST00000509013 TCOF1Q13428 1488 aaKnown RBP9.78□□□□□ -0.84
SSBP2-211ENST00000509013 MROH2AA6NES4 1674 aa9.77□□□□□ -0.84
SSBP2-211ENST00000509013 SYCP2Q9BX26 1530 aa9.77□□□□□ -0.84
SSBP2-211ENST00000509013 GPATCH8Q9UKJ3 1502 aaKnown RBP9.77□□□□□ -0.84
SSBP2-211ENST00000509013 KIAA1107Q9UPP5 1409 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms