RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.36■□□□□ 0.373e-7■□□□□ 9.3
SMG7-214ENST00000508461 PPP4R2Q9NY27 417 aa17.36■□□□□ 0.37
SMG7-214ENST00000508461 C11orf95C9JLR9 678 aaPredicted RBP17.36■□□□□ 0.37
SMG7-214ENST00000508461 CUL7Q14999 1698 aa17.35■□□□□ 0.37
SMG7-214ENST00000508461 EHBP1L1Q8N3D4 1523 aa17.35■□□□□ 0.37
SMG7-214ENST00000508461 KIF7Q2M1P5 1343 aa17.33■□□□□ 0.37
SMG7-214ENST00000508461 CC2D1BQ5T0F9 858 aaKnown RBP17.33■□□□□ 0.36
SMG7-214ENST00000508461 SUPT6HQ7KZ85 1726 aaKnown RBP17.32■□□□□ 0.36
SMG7-214ENST00000508461 ANKRD30AQ9BXX3 1397 aa17.32■□□□□ 0.36
SMG7-214ENST00000508461 EPRSP07814 1512 aaKnown RBP17.32■□□□□ 0.36
SMG7-214ENST00000508461 SENP3Q9H4L4 574 aaPredicted RBP17.32■□□□□ 0.36
SMG7-214ENST00000508461 CCDC7Q96M83 1385 aa17.32■□□□□ 0.36
SMG7-214ENST00000508461 CARMIL2Q6F5E8 1435 aa17.31■□□□□ 0.36
SMG7-214ENST00000508461 CHGAP10645 457 aaKnown RBP17.31■□□□□ 0.36
SMG7-214ENST00000508461 GRIN2BQ13224 1484 aa17.31■□□□□ 0.36
SMG7-214ENST00000508461 PRG4Q92954 1404 aaPredicted RBP17.31■□□□□ 0.36
SMG7-214ENST00000508461 LAMC3Q9Y6N6 1575 aa17.3■□□□□ 0.36
SMG7-214ENST00000508461 ST20-MTHFSA0A0A6YYL1 179 aa17.3■□□□□ 0.36
SMG7-214ENST00000508461 NBR1Q14596 966 aa17.3■□□□□ 0.36
SMG7-214ENST00000508461 PTPN23Q9H3S7 1636 aa17.29■□□□□ 0.36
SMG7-214ENST00000508461 SNAPC4Q5SXM2 1469 aa17.29■□□□□ 0.36
SMG7-214ENST00000508461 CFAP43Q8NDM7 1665 aa17.27■□□□□ 0.36
SMG7-214ENST00000508461 USP47Q96K76 1375 aa17.27■□□□□ 0.35
SMG7-214ENST00000508461 ANP32AP39687 249 aaKnown RBP17.26■□□□□ 0.35
SMG7-214ENST00000508461 ZNF608Q9ULD9 1512 aaPredicted RBP17.26■□□□□ 0.35
SMG7-214ENST00000508461 CNTLNQ9NXG0 1405 aa17.25■□□□□ 0.35
SMG7-214ENST00000508461 RTL5Q5HYW3 569 aaPredicted RBP17.24■□□□□ 0.35
SMG7-214ENST00000508461 IQGAP2Q13576 1575 aa17.24■□□□□ 0.35
SMG7-214ENST00000508461 ROCK2O75116 1388 aaKnown RBP17.23■□□□□ 0.35
SMG7-214ENST00000508461 HECW1Q76N89 1606 aa17.23■□□□□ 0.35
SMG7-214ENST00000508461 DAPK1P53355 1430 aa17.23■□□□□ 0.35
SMG7-214ENST00000508461 DAXXQ9UER7 740 aaPredicted RBP17.23■□□□□ 0.35
SMG7-214ENST00000508461 CTTNBP2Q8WZ74 1663 aa17.23■□□□□ 0.35
SMG7-214ENST00000508461 MRC2Q9UBG0 1479 aa17.22■□□□□ 0.35
SMG7-214ENST00000508461 MIA2Q96PC5 1412 aa17.21■□□□□ 0.35
SMG7-214ENST00000508461 THOC2Q8NI27 1593 aaKnown RBP17.21■□□□□ 0.34
SMG7-214ENST00000508461 ZBED9Q6R2W3 1325 aa17.18■□□□□ 0.34
SMG7-214ENST00000508461 ANKRD50Q9ULJ7 1429 aa17.18■□□□□ 0.34
SMG7-214ENST00000508461 ABCC5O15440 1437 aa17.18■□□□□ 0.34
SMG7-214ENST00000508461 PLB1Q6P1J6 1458 aa17.17■□□□□ 0.34
SMG7-214ENST00000508461 WDR43Q15061 677 aaKnown RBP eCLIP17.17■□□□□ 0.34
SMG7-214ENST00000508461 ANKRD30BQ9BXX2 1392 aa17.16■□□□□ 0.34
SMG7-214ENST00000508461 UGGT2Q9NYU1 1516 aa17.16■□□□□ 0.34
SMG7-214ENST00000508461 NUDCQ9Y266 331 aa17.16■□□□□ 0.34
SMG7-214ENST00000508461 KIF15Q9NS87 1388 aa17.13■□□□□ 0.33
SMG7-214ENST00000508461 PTPRGP23470 1445 aa17.13■□□□□ 0.33
SMG7-214ENST00000508461 TROQ12816 1431 aaPredicted RBP17.13■□□□□ 0.33
SMG7-214ENST00000508461 MAGI3Q5TCQ9 1506 aa17.13■□□□□ 0.33
SMG7-214ENST00000508461 KNSTRNQ9Y448 316 aa17.13■□□□□ 0.33
SMG7-214ENST00000508461 IFT140Q96RY7 1462 aa17.12■□□□□ 0.33
SMG7-214ENST00000508461 KIAA0586Q9BVV6 1533 aa17.12■□□□□ 0.33
SMG7-214ENST00000508461 CANXP27824 592 aaKnown RBP17.12■□□□□ 0.33
SMG7-214ENST00000508461 ZBTB47Q9UFB7 747 aaPredicted RBP17.11■□□□□ 0.33
SMG7-214ENST00000508461 KIF21AQ7Z4S6 1674 aa17.1■□□□□ 0.33
SMG7-214ENST00000508461 TMF1P82094 1093 aa17.09■□□□□ 0.33
SMG7-214ENST00000508461 NBPF1Q3BBV0 1214 aa17.09■□□□□ 0.33
SMG7-214ENST00000508461 KTN1Q86UP2 1357 aaKnown RBP17.08■□□□□ 0.32
SMG7-214ENST00000508461 TNNT2P45379 298 aaPredicted RBP17.07■□□□□ 0.32
SMG7-214ENST00000508461 KIAA1107Q9UPP5 1409 aa17.07■□□□□ 0.32
SMG7-214ENST00000508461 CCDC144AA2RUR9 1427 aa17.07■□□□□ 0.32
SMG7-214ENST00000508461 AKNAQ7Z591 1439 aa17.07■□□□□ 0.32
SMG7-214ENST00000508461 ERICH6BQ5W0A0 696 aa17.06■□□□□ 0.32
SMG7-214ENST00000508461 RALBP1Q15311 655 aa17.06■□□□□ 0.32
SMG7-214ENST00000508461 RCAN3Q9UKA8 241 aa17.06■□□□□ 0.32
SMG7-214ENST00000508461 ROCK1Q13464 1354 aa17.06■□□□□ 0.32
SMG7-214ENST00000508461 PANK3Q9H999 370 aa17.05■□□□□ 0.32
SMG7-214ENST00000508461 ABCA5Q8WWZ7 1642 aa17.05■□□□□ 0.32
SMG7-214ENST00000508461 CAMSAP2Q08AD1 1489 aa17.05■□□□□ 0.32
SMG7-214ENST00000508461 GRIN2AQ12879 1464 aa17.05■□□□□ 0.32
SMG7-214ENST00000508461 NEUROD2Q15784 382 aa17.05■□□□□ 0.32
SMG7-214ENST00000508461 RPRD2Q5VT52 1461 aaKnown RBP17.05■□□□□ 0.32
SMG7-214ENST00000508461 PLIN1O60240 522 aa17.04■□□□□ 0.32
SMG7-214ENST00000508461 NLRP13Q86W25 1043 aa17.04■□□□□ 0.32
SMG7-214ENST00000508461 NCOA1Q15788 1441 aa17.04■□□□□ 0.32
SMG7-214ENST00000508461 NUP153P49790 1475 aaKnown RBP17.04■□□□□ 0.32
SMG7-214ENST00000508461 C9orf84Q5VXU9 1444 aa17.04■□□□□ 0.32
SMG7-214ENST00000508461 MYBBP1AQ9BQG0 1328 aaKnown RBP17.04■□□□□ 0.32
SMG7-214ENST00000508461 SAMD9Q5K651 1589 aa17.04■□□□□ 0.32
SMG7-214ENST00000508461 ARHGEF11O15085 1522 aa17.03■□□□□ 0.32
SMG7-214ENST00000508461 BCL11AQ9H165 835 aa17.03■□□□□ 0.32
SMG7-214ENST00000508461 EFCAB2Q5VUJ9 269 aa17.02■□□□□ 0.32
SMG7-214ENST00000508461 NOP58Q9Y2X3 529 aaKnown RBP17.02■□□□□ 0.32
SMG7-214ENST00000508461 KDM6BO15054 1643 aa17.01■□□□□ 0.31
SMG7-214ENST00000508461 EXOC6Q8TAG9 804 aa17.01■□□□□ 0.31
SMG7-214ENST00000508461 NPM1P06748 294 aaKnown RBP eCLIP17■□□□□ 0.31
SMG7-214ENST00000508461 TCOF1Q13428 1488 aaKnown RBP16.99■□□□□ 0.31
SMG7-214ENST00000508461 WDR62O43379 1518 aa16.99■□□□□ 0.31
SMG7-214ENST00000508461 KIF3BO15066 747 aa16.98■□□□□ 0.31
SMG7-214ENST00000508461 PNISRQ8TF01 805 aaKnown RBP16.98■□□□□ 0.31
SMG7-214ENST00000508461 LAS1LQ9Y4W2 734 aaKnown RBP16.98■□□□□ 0.31
SMG7-214ENST00000508461 CDCA7LQ96GN5 454 aa16.97■□□□□ 0.31
SMG7-214ENST00000508461 RSPH4AQ5TD94 716 aa16.97■□□□□ 0.31
SMG7-214ENST00000508461 ADAMTS12P58397 1594 aa16.97■□□□□ 0.31
SMG7-214ENST00000508461 GPATCH8Q9UKJ3 1502 aaKnown RBP16.97■□□□□ 0.31
SMG7-214ENST00000508461 CCDC146Q8IYE0 955 aa16.96■□□□□ 0.31
SMG7-214ENST00000508461 MSH5O43196 834 aa16.96■□□□□ 0.3
SMG7-214ENST00000508461 RGS3P49796 1198 aa16.96■□□□□ 0.3
SMG7-214ENST00000508461 SPAG9O60271 1321 aaKnown RBP16.95■□□□□ 0.3
SMG7-214ENST00000508461 AFAP1Q8N556 730 aa16.94■□□□□ 0.3
SMG7-214ENST00000508461 GGT6Q6P531 493 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms