RNA–Protein interactions for RNA: ENST00000507516.3

COL6A4P2-203, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 5

Gene COL6A4P2, Length 738 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-203ENST00000507516 CSRNP3Q8WYN3 585 aa15.96■□□□□ 0.15
COL6A4P2-203ENST00000507516 HECW1Q76N89 1606 aa15.96■□□□□ 0.15
COL6A4P2-203ENST00000507516 SCAPERQ9BY12 1400 aa15.95■□□□□ 0.14
COL6A4P2-203ENST00000507516 ARHGEF12Q9NZN5 1544 aa15.95■□□□□ 0.14
COL6A4P2-203ENST00000507516 CEBPAP49715 358 aaPredicted RBP15.95■□□□□ 0.14
COL6A4P2-203ENST00000507516 ATP10AO60312 1499 aa15.94■□□□□ 0.14
COL6A4P2-203ENST00000507516 FER1L4A9Z1Z3 1794 aa15.93■□□□□ 0.14
COL6A4P2-203ENST00000507516 C9orf84Q5VXU9 1444 aa15.93■□□□□ 0.14
COL6A4P2-203ENST00000507516 PLCH2O75038 1416 aa15.92■□□□□ 0.14
COL6A4P2-203ENST00000507516 UHRF1BP1Q6BDS2 1440 aa15.92■□□□□ 0.14
COL6A4P2-203ENST00000507516 PREX1Q8TCU6 1659 aa15.9■□□□□ 0.14
COL6A4P2-203ENST00000507516 SPATA31D1Q6ZQQ2 1576 aa15.9■□□□□ 0.14
COL6A4P2-203ENST00000507516 EFCAB2Q5VUJ9 269 aa15.87■□□□□ 0.13
COL6A4P2-203ENST00000507516 PTPRTO14522 1441 aa15.86■□□□□ 0.13
COL6A4P2-203ENST00000507516 CDK13Q14004 1512 aaKnown RBP15.85■□□□□ 0.13
COL6A4P2-203ENST00000507516 STRCQ7RTU9 1775 aa15.84■□□□□ 0.13
COL6A4P2-203ENST00000507516 MYT1LQ9UL68 1186 aa15.83■□□□□ 0.12
COL6A4P2-203ENST00000507516 ZNF518AQ6AHZ1 1483 aa15.83■□□□□ 0.12
COL6A4P2-203ENST00000507516 AFAP1Q8N556 730 aa15.81■□□□□ 0.12
COL6A4P2-203ENST00000507516 ESF1Q9H501 851 aaKnown RBP15.8■□□□□ 0.12
COL6A4P2-203ENST00000507516 LTBP4Q8N2S1 1624 aa15.79■□□□□ 0.12
COL6A4P2-203ENST00000507516 IQSEC2Q5JU85 1478 aa15.79■□□□□ 0.12
COL6A4P2-203ENST00000507516 EEA1Q15075 1411 aa15.79■□□□□ 0.12
COL6A4P2-203ENST00000507516 ATP1B4Q9UN42 357 aaPredicted RBP15.79■□□□□ 0.12
COL6A4P2-203ENST00000507516 CDK11AQ9UQ88 783 aaPredicted RBP15.78■□□□□ 0.12
COL6A4P2-203ENST00000507516 TRAPPC8Q9Y2L5 1435 aa15.77■□□□□ 0.12
COL6A4P2-203ENST00000507516 KDM5CP41229 1560 aa15.77■□□□□ 0.11
COL6A4P2-203ENST00000507516 NCOA1Q15788 1441 aa15.76■□□□□ 0.11
COL6A4P2-203ENST00000507516 DIP2CQ9Y2E4 1556 aa15.75■□□□□ 0.11
COL6A4P2-203ENST00000507516 ARHGAP5Q13017 1502 aa15.75■□□□□ 0.11
COL6A4P2-203ENST00000507516 REREQ9P2R6 1566 aa15.75■□□□□ 0.11
COL6A4P2-203ENST00000507516 MYO5CQ9NQX4 1742 aa15.74■□□□□ 0.11
COL6A4P2-203ENST00000507516 MLH3Q9UHC1 1453 aa15.72■□□□□ 0.11
COL6A4P2-203ENST00000507516 TROQ12816 1431 aaPredicted RBP15.72■□□□□ 0.11
COL6A4P2-203ENST00000507516 FMN1Q68DA7 1419 aa15.72■□□□□ 0.11
COL6A4P2-203ENST00000507516 AGLP35573 1532 aa15.72■□□□□ 0.11
COL6A4P2-203ENST00000507516 SETD1BQ9UPS6 1966 aaKnown RBP15.71■□□□□ 0.11
COL6A4P2-203ENST00000507516 CNTLNQ9NXG0 1405 aa15.71■□□□□ 0.11
COL6A4P2-203ENST00000507516 C3P01024 1663 aa15.71■□□□□ 0.11
COL6A4P2-203ENST00000507516 UBAP1LF5GYI3 381 aa15.71■□□□□ 0.11
COL6A4P2-203ENST00000507516 KIF14Q15058 1648 aa15.71■□□□□ 0.11
COL6A4P2-203ENST00000507516 CLIP1P30622 1438 aa15.7■□□□□ 0.1
COL6A4P2-203ENST00000507516 ABCA6Q8N139 1617 aa15.69■□□□□ 0.1
COL6A4P2-203ENST00000507516 ZNF335Q9H4Z2 1342 aaPredicted RBP15.68■□□□□ 0.1
COL6A4P2-203ENST00000507516 CAMSAP1Q5T5Y3 1602 aa15.67■□□□□ 0.1
COL6A4P2-203ENST00000507516 NPATQ14207 1427 aa15.67■□□□□ 0.1
COL6A4P2-203ENST00000507516 NCKAP5LQ9HCH0 1330 aa15.67■□□□□ 0.1
COL6A4P2-203ENST00000507516 ABCC1P33527 1531 aa15.63■□□□□ 0.09
COL6A4P2-203ENST00000507516 ZMYM3Q14202 1370 aa15.63■□□□□ 0.09
COL6A4P2-203ENST00000507516 UBTFP17480 764 aaKnown RBP15.63■□□□□ 0.09
COL6A4P2-203ENST00000507516 PKD2Q13563 968 aa15.63■□□□□ 0.09
COL6A4P2-203ENST00000507516 ARHGAP35Q9NRY4 1499 aa15.63■□□□□ 0.09
COL6A4P2-203ENST00000507516 EHMT2Q96KQ7 1210 aa15.61■□□□□ 0.09
COL6A4P2-203ENST00000507516 PLA2R1Q13018 1463 aa15.59■□□□□ 0.09
COL6A4P2-203ENST00000507516 PPP6R1Q9UPN7 881 aa15.58■□□□□ 0.08
COL6A4P2-203ENST00000507516 TCOF1Q13428 1488 aaKnown RBP15.58■□□□□ 0.08
COL6A4P2-203ENST00000507516 PREX2Q70Z35 1606 aa15.57■□□□□ 0.08
COL6A4P2-203ENST00000507516 SCAF1Q9H7N4 1312 aaKnown RBP15.57■□□□□ 0.08
COL6A4P2-203ENST00000507516 CDC42BPBQ9Y5S2 1711 aa15.57■□□□□ 0.08
COL6A4P2-203ENST00000507516 KIDINS220Q9ULH0 1771 aa15.57■□□□□ 0.08
COL6A4P2-203ENST00000507516 HSPA1LP34931 641 aa15.56■□□□□ 0.08
COL6A4P2-203ENST00000507516 SPAG9O60271 1321 aaKnown RBP15.56■□□□□ 0.08
COL6A4P2-203ENST00000507516 MROH2AA6NES4 1674 aa15.56■□□□□ 0.08
COL6A4P2-203ENST00000507516 ITSN2Q9NZM3 1697 aa15.56■□□□□ 0.08
COL6A4P2-203ENST00000507516 ZNF777Q9ULD5 760 aaPredicted RBP15.55■□□□□ 0.08
COL6A4P2-203ENST00000507516 SAMD9LQ8IVG5 1584 aa15.54■□□□□ 0.08
COL6A4P2-203ENST00000507516 PTPRKQ15262 1439 aa15.54■□□□□ 0.08
COL6A4P2-203ENST00000507516 PIP4K2BP78356 416 aa15.54■□□□□ 0.08
COL6A4P2-203ENST00000507516 CEP170BQ9Y4F5 1589 aaPredicted RBP15.53■□□□□ 0.08
COL6A4P2-203ENST00000507516 MYO3AQ8NEV4 1616 aa15.53■□□□□ 0.08
COL6A4P2-203ENST00000507516 MED1Q15648 1581 aaPredicted RBP15.53■□□□□ 0.08
COL6A4P2-203ENST00000507516 TOM1O60784 492 aa15.52■□□□□ 0.08
COL6A4P2-203ENST00000507516 CCDC18Q5T9S5 1454 aa15.52■□□□□ 0.07
COL6A4P2-203ENST00000507516 ZNF142P52746 1687 aaPredicted RBP15.51■□□□□ 0.07
COL6A4P2-203ENST00000507516 HNRNPMP52272 730 aaKnown RBP eCLIP15.51■□□□□ 0.07
COL6A4P2-203ENST00000507516 GGT6Q6P531 493 aa15.51■□□□□ 0.07
COL6A4P2-203ENST00000507516 A2MP01023 1474 aa15.5■□□□□ 0.07
COL6A4P2-203ENST00000507516 CASKIN1Q8WXD9 1431 aa15.5■□□□□ 0.07
COL6A4P2-203ENST00000507516 SYCP2Q9BX26 1530 aa15.49■□□□□ 0.07
COL6A4P2-203ENST00000507516 PHF23Q9BUL5 403 aaPredicted RBP15.49■□□□□ 0.07
COL6A4P2-203ENST00000507516 LRRIQ1Q96JM4 1722 aa15.48■□□□□ 0.07
COL6A4P2-203ENST00000507516 CLTCQ00610 1675 aaKnown RBP15.48■□□□□ 0.07
COL6A4P2-203ENST00000507516 ATP7AQ04656 1500 aa15.48■□□□□ 0.07
COL6A4P2-203ENST00000507516 A2ML1A8K2U0 1454 aa15.47■□□□□ 0.07
COL6A4P2-203ENST00000507516 PLXNC1O60486 1568 aa15.47■□□□□ 0.07
COL6A4P2-203ENST00000507516 CPS1P31327 1500 aa15.47■□□□□ 0.07
COL6A4P2-203ENST00000507516 SUPT6HQ7KZ85 1726 aaKnown RBP15.46■□□□□ 0.07
COL6A4P2-203ENST00000507516 KIAA1107Q9UPP5 1409 aa15.46■□□□□ 0.07
COL6A4P2-203ENST00000507516 GPATCH8Q9UKJ3 1502 aaKnown RBP15.46■□□□□ 0.07
COL6A4P2-203ENST00000507516 CDC42BPAQ5VT25 1732 aa15.45■□□□□ 0.06
COL6A4P2-203ENST00000507516 PLEKHH2Q8IVE3 1493 aa15.45■□□□□ 0.06
COL6A4P2-203ENST00000507516 SHANK2Q9UPX8 1470 aa15.45■□□□□ 0.06
COL6A4P2-203ENST00000507516 CFDP1Q9UEE9 299 aaPredicted RBP15.44■□□□□ 0.06
COL6A4P2-203ENST00000507516 INO80Q9ULG1 1556 aaPredicted RBP15.42■□□□□ 0.06
COL6A4P2-203ENST00000507516 DNMT1P26358 1616 aaKnown RBP15.42■□□□□ 0.06
COL6A4P2-203ENST00000507516 TNRQ92752 1358 aa15.4■□□□□ 0.06
COL6A4P2-203ENST00000507516 NEURL4Q96JN8 1562 aa15.4■□□□□ 0.06
COL6A4P2-203ENST00000507516 FYCO1Q9BQS8 1478 aa15.4■□□□□ 0.06
COL6A4P2-203ENST00000507516 CCNB3Q8WWL7 1395 aa15.39■□□□□ 0.05
COL6A4P2-203ENST00000507516 FBXO31Q5XUX0 539 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms