RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 PAXIP1Q6ZW49 1069 aaPredicted RBP12.9□□□□□ -0.34
NR1I3-224ENST00000507215 IRX5P78411 483 aaPredicted RBP12.89□□□□□ -0.35
NR1I3-224ENST00000507215 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.89□□□□□ -0.35
NR1I3-224ENST00000507215 COLQQ9Y215 455 aaPredicted RBP12.89□□□□□ -0.35
NR1I3-224ENST00000507215 FANCD2Q9BXW9 1451 aa12.89□□□□□ -0.35
NR1I3-224ENST00000507215 IER5LQ5T953 404 aa12.87□□□□□ -0.35
NR1I3-224ENST00000507215 CFAP44Q96MT7 982 aa12.87□□□□□ -0.35
NR1I3-224ENST00000507215 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.87□□□□□ -0.35
NR1I3-224ENST00000507215 CFTRP13569 1480 aa12.86□□□□□ -0.35
NR1I3-224ENST00000507215 PPP1R37O75864 691 aa12.85□□□□□ -0.35
NR1I3-224ENST00000507215 NLRP6P59044 892 aa12.85□□□□□ -0.35
NR1I3-224ENST00000507215 PLCB2Q00722 1185 aa12.85□□□□□ -0.35
NR1I3-224ENST00000507215 DPY19L2Q6NUT2 758 aa12.85□□□□□ -0.35
NR1I3-224ENST00000507215 PDCD7Q8N8D1 485 aaKnown RBP12.85□□□□□ -0.35
NR1I3-224ENST00000507215 SPRYD3Q8NCJ5 442 aa12.85□□□□□ -0.35
NR1I3-224ENST00000507215 SLC39A7Q92504 469 aa12.85□□□□□ -0.35
NR1I3-224ENST00000507215 METRNQ9UJH8 293 aa12.85□□□□□ -0.35
NR1I3-224ENST00000507215 C7P10643 843 aa12.83□□□□□ -0.36
NR1I3-224ENST00000507215 WIZO95785 1651 aa12.82□□□□□ -0.36
NR1I3-224ENST00000507215 OCEL1Q9H607 264 aa12.81□□□□□ -0.36
NR1I3-224ENST00000507215 SEC24BO95487 1268 aa12.76□□□□□ -0.37
NR1I3-224ENST00000507215 PLCG2P16885 1265 aa12.76□□□□□ -0.37
NR1I3-224ENST00000507215 URB2Q14146 1524 aaKnown RBP12.76□□□□□ -0.37
NR1I3-224ENST00000507215 POTEB2H3BUK9 544 aa12.74□□□□□ -0.37
NR1I3-224ENST00000507215 TOP2AP11388 1531 aaKnown RBP12.73□□□□□ -0.37
NR1I3-224ENST00000507215 IFT140Q96RY7 1462 aa12.73□□□□□ -0.37
NR1I3-224ENST00000507215 PRDM2Q13029 1718 aa12.73□□□□□ -0.37
NR1I3-224ENST00000507215 RIMBP3CA6NJZ7 1639 aa12.73□□□□□ -0.37
NR1I3-224ENST00000507215 RIMBP3BA6NNM3 1639 aa12.73□□□□□ -0.37
NR1I3-224ENST00000507215 RIMBP3Q9UFD9 1639 aa12.73□□□□□ -0.37
NR1I3-224ENST00000507215 TSHZ2Q9NRE2 1034 aa12.72□□□□□ -0.37
NR1I3-224ENST00000507215 RYDENQ9NUL5 291 aaKnown RBP12.72□□□□□ -0.37
NR1I3-224ENST00000507215 POTEJP0CG39 1038 aa12.71□□□□□ -0.37
NR1I3-224ENST00000507215 ABCC8Q09428 1581 aa12.69□□□□□ -0.38
NR1I3-224ENST00000507215 ARHGEF11O15085 1522 aa12.69□□□□□ -0.38
NR1I3-224ENST00000507215 RSF1Q96T23 1441 aaPredicted RBP12.67□□□□□ -0.38
NR1I3-224ENST00000507215 CADPS2Q86UW7 1296 aa12.66□□□□□ -0.38
NR1I3-224ENST00000507215 HAP1P54257 671 aaPredicted RBP12.65□□□□□ -0.38
NR1I3-224ENST00000507215 MICALL2Q8IY33 904 aa12.65□□□□□ -0.38
NR1I3-224ENST00000507215 TMEM121BQ9BXQ6 578 aaPredicted RBP12.64□□□□□ -0.39
NR1I3-224ENST00000507215 BOLA1Q9Y3E2 137 aa12.64□□□□□ -0.39
NR1I3-224ENST00000507215 ZNF608Q9ULD9 1512 aaPredicted RBP12.62□□□□□ -0.39
NR1I3-224ENST00000507215 TOPBP1Q92547 1522 aa12.61□□□□□ -0.39
NR1I3-224ENST00000507215 L3MBTL3Q96JM7 780 aaPredicted RBP12.59□□□□□ -0.39
NR1I3-224ENST00000507215 EIF4G3O43432 1585 aaKnown RBP12.59□□□□□ -0.39
NR1I3-224ENST00000507215 DNMBPQ6XZF7 1577 aa12.57□□□□□ -0.4
NR1I3-224ENST00000507215 CYB5RLQ6IPT4 315 aa12.57□□□□□ -0.4
NR1I3-224ENST00000507215 TMEM92Q6UXU6 159 aa12.56□□□□□ -0.4
NR1I3-224ENST00000507215 CCDC88BA6NC98 1476 aa12.54□□□□□ -0.4
NR1I3-224ENST00000507215 SLC24A1O60721 1099 aa12.54□□□□□ -0.4
NR1I3-224ENST00000507215 KDM2AQ9Y2K7 1162 aa12.54□□□□□ -0.4
NR1I3-224ENST00000507215 NCKAP5LQ9HCH0 1330 aa12.53□□□□□ -0.4
NR1I3-224ENST00000507215 WDR97A6NE52 1622 aa12.52□□□□□ -0.4
NR1I3-224ENST00000507215 CHD1O14646 1710 aa12.52□□□□□ -0.41
NR1I3-224ENST00000507215 ARAP1Q96P48 1450 aa12.52□□□□□ -0.41
NR1I3-224ENST00000507215 TARBP1Q13395 1621 aaKnown RBP12.51□□□□□ -0.41
NR1I3-224ENST00000507215 G3V3G9 751 aa12.5□□□□□ -0.41
NR1I3-224ENST00000507215 LHX8Q68G74 356 aa12.49□□□□□ -0.41
NR1I3-224ENST00000507215 CRISPLD2Q9H0B8 497 aa12.49□□□□□ -0.41
NR1I3-224ENST00000507215 AQRO60306 1485 aaKnown RBP eCLIP12.47□□□□□ -0.41
NR1I3-224ENST00000507215 KIF3CO14782 793 aa12.46□□□□□ -0.41
NR1I3-224ENST00000507215 OTUD5Q96G74 571 aa12.46□□□□□ -0.41
NR1I3-224ENST00000507215 POLA1P09884 1462 aaPredicted RBP12.46□□□□□ -0.42
NR1I3-224ENST00000507215 C2orf72A6NCS6 295 aa12.45□□□□□ -0.42
NR1I3-224ENST00000507215 C3orf67Q6ZVT6 689 aa12.45□□□□□ -0.42
NR1I3-224ENST00000507215 SYNJ1O43426 1573 aa12.43□□□□□ -0.42
NR1I3-224ENST00000507215 MAGI1Q96QZ7 1491 aaPredicted RBP12.43□□□□□ -0.42
NR1I3-224ENST00000507215 VSIG10Q8N0Z9 540 aa12.43□□□□□ -0.42
NR1I3-224ENST00000507215 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.43□□□□□ -0.42
NR1I3-224ENST00000507215 LARP6Q9BRS8 491 aaKnown RBP12.42□□□□□ -0.42
NR1I3-224ENST00000507215 GPHNQ9NQX3 736 aaPredicted RBP12.42□□□□□ -0.42
NR1I3-224ENST00000507215 CLASP1Q7Z460 1538 aa12.42□□□□□ -0.42
NR1I3-224ENST00000507215 SOGA1O94964 1423 aa12.41□□□□□ -0.42
NR1I3-224ENST00000507215 PDE4AP27815 886 aa12.41□□□□□ -0.42
NR1I3-224ENST00000507215 MFSD10Q14728 455 aa12.39□□□□□ -0.43
NR1I3-224ENST00000507215 CHMP7Q8WUX9 453 aaPredicted RBP12.39□□□□□ -0.43
NR1I3-224ENST00000507215 DSG2Q14126 1118 aa12.38□□□□□ -0.43
NR1I3-224ENST00000507215 MAMSTRQ6ZN01 415 aa12.38□□□□□ -0.43
NR1I3-224ENST00000507215 TMC2Q8TDI7 906 aa12.38□□□□□ -0.43
NR1I3-224ENST00000507215 SCUBE2Q9NQ36 999 aa12.38□□□□□ -0.43
NR1I3-224ENST00000507215 SNAPC4Q5SXM2 1469 aa12.38□□□□□ -0.43
NR1I3-224ENST00000507215 GRIN2BQ13224 1484 aa12.37□□□□□ -0.43
NR1I3-224ENST00000507215 SYNJ2O15056 1496 aa12.36□□□□□ -0.43
NR1I3-224ENST00000507215 TDRD9Q8NDG6 1382 aaKnown RBP12.36□□□□□ -0.43
NR1I3-224ENST00000507215 SLAIN1Q8ND83 568 aa12.36□□□□□ -0.43
NR1I3-224ENST00000507215 FOXK1P85037 733 aa12.35□□□□□ -0.43
NR1I3-224ENST00000507215 RAD54L2Q9Y4B4 1467 aa12.34□□□□□ -0.43
NR1I3-224ENST00000507215 DDX27Q96GQ7 796 aaKnown RBP12.34□□□□□ -0.43
NR1I3-224ENST00000507215 PPP1R15BQ5SWA1 713 aa12.33□□□□□ -0.44
NR1I3-224ENST00000507215 FGD5Q6ZNL6 1462 aa12.33□□□□□ -0.44
NR1I3-224ENST00000507215 PLPP6Q8IY26 295 aa12.32□□□□□ -0.44
NR1I3-224ENST00000507215 GAPVD1Q14C86 1478 aa12.3□□□□□ -0.44
NR1I3-224ENST00000507215 WDR70Q9NW82 654 aa12.28□□□□□ -0.44
NR1I3-224ENST00000507215 CUX1P39880 1505 aa12.26□□□□□ -0.45
NR1I3-224ENST00000507215 CAMK2BQ13554 666 aa12.25□□□□□ -0.45
NR1I3-224ENST00000507215 EMILIN3Q9NT22 766 aa12.25□□□□□ -0.45
NR1I3-224ENST00000507215 PBRM1Q86U86 1689 aa12.25□□□□□ -0.45
NR1I3-224ENST00000507215 HOXB3P14651 431 aaPredicted RBP12.24□□□□□ -0.45
NR1I3-224ENST00000507215 KCNV2Q8TDN2 545 aa12.24□□□□□ -0.45
NR1I3-224ENST00000507215 ABCA10Q8WWZ4 1543 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms