RNA–Protein interactions for RNA: ENST00000506497.5

SEC31A-219, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 3

Gene SEC31A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-219ENST00000506497 SNPHO15079 494 aa12.97□□□□□ -0.33
SEC31A-219ENST00000506497 RIOK3O14730 519 aaKnown RBP12.96□□□□□ -0.33
SEC31A-219ENST00000506497 EFCAB3Q8N7B9 438 aa12.95□□□□□ -0.34
SEC31A-219ENST00000506497 RNF25Q96BH1 459 aaPredicted RBP12.94□□□□□ -0.34
SEC31A-219ENST00000506497 BOLA1Q9Y3E2 137 aa12.92□□□□□ -0.34
SEC31A-219ENST00000506497 CC2D2AQ9P2K1 1620 aa12.91□□□□□ -0.34
SEC31A-219ENST00000506497 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.9□□□□□ -0.34
SEC31A-219ENST00000506497 VGFO15240 615 aaPredicted RBP12.9□□□□□ -0.34
SEC31A-219ENST00000506497 ZFP91Q96JP5 570 aaPredicted RBP12.9□□□□□ -0.34
SEC31A-219ENST00000506497 PLCB2Q00722 1185 aa12.88□□□□□ -0.35
SEC31A-219ENST00000506497 CDAN1Q8IWY9 1227 aa12.88□□□□□ -0.35
SEC31A-219ENST00000506497 TMEM121BQ9BXQ6 578 aaPredicted RBP12.87□□□□□ -0.35
SEC31A-219ENST00000506497 MARVELD3Q96A59 401 aa12.84□□□□□ -0.35
SEC31A-219ENST00000506497 ABCC8Q09428 1581 aa12.83□□□□□ -0.36
SEC31A-219ENST00000506497 WRNQ14191 1432 aaPredicted RBP eCLIP12.82□□□□□ -0.36
SEC31A-219ENST00000506497 SOX12O15370 315 aa12.81□□□□□ -0.36
SEC31A-219ENST00000506497 TAOK2Q9UL54 1235 aa12.81□□□□□ -0.36
SEC31A-219ENST00000506497 CFTRP13569 1480 aa12.8□□□□□ -0.36
SEC31A-219ENST00000506497 ECM2O94769 699 aaPredicted RBP12.8□□□□□ -0.36
SEC31A-219ENST00000506497 BCANQ96GW7 911 aa12.8□□□□□ -0.36
SEC31A-219ENST00000506497 PHF8Q9UPP1 1060 aa12.78□□□□□ -0.36
SEC31A-219ENST00000506497 BCL11BQ9C0K0 894 aaPredicted RBP12.77□□□□□ -0.37
SEC31A-219ENST00000506497 EEA1Q15075 1411 aa12.77□□□□□ -0.37
SEC31A-219ENST00000506497 EMP3P54852 163 aa12.75□□□□□ -0.37
SEC31A-219ENST00000506497 STK24Q9Y6E0 443 aa12.75□□□□□ -0.37
SEC31A-219ENST00000506497 PRDM2Q13029 1718 aa12.74□□□□□ -0.37
SEC31A-219ENST00000506497 CADPSQ9ULU8 1353 aa12.74□□□□□ -0.37
SEC31A-219ENST00000506497 MICALL2Q8IY33 904 aa12.74□□□□□ -0.37
SEC31A-219ENST00000506497 MS4A4AQ96JQ5 239 aa12.74□□□□□ -0.37
SEC31A-219ENST00000506497 STK25O00506 426 aa12.71□□□□□ -0.37
SEC31A-219ENST00000506497 SYNJ1O43426 1573 aa12.71□□□□□ -0.37
SEC31A-219ENST00000506497 PKD2Q13563 968 aa12.7□□□□□ -0.38
SEC31A-219ENST00000506497 TOP2BQ02880 1626 aa12.7□□□□□ -0.38
SEC31A-219ENST00000506497 NLRP6P59044 892 aa12.69□□□□□ -0.38
SEC31A-219ENST00000506497 ZNF710Q8N1W2 664 aa12.69□□□□□ -0.38
SEC31A-219ENST00000506497 HOXB3P14651 431 aaPredicted RBP12.68□□□□□ -0.38
SEC31A-219ENST00000506497 FAM9AQ8IZU1 332 aaPredicted RBP12.68□□□□□ -0.38
SEC31A-219ENST00000506497 BIVM-ERCC5R4GMW8 1640 aa12.68□□□□□ -0.38
SEC31A-219ENST00000506497 FAM205CA6NFA0 338 aa12.67□□□□□ -0.38
SEC31A-219ENST00000506497 RGL2O15211 777 aa12.67□□□□□ -0.38
SEC31A-219ENST00000506497 HAP1P54257 671 aaPredicted RBP12.67□□□□□ -0.38
SEC31A-219ENST00000506497 LOC105371045A0A1W2PR82 267 aa12.66□□□□□ -0.38
SEC31A-219ENST00000506497 DOK7Q18PE1 504 aa12.66□□□□□ -0.38
SEC31A-219ENST00000506497 TMEM92Q6UXU6 159 aa12.65□□□□□ -0.38
SEC31A-219ENST00000506497 HS3ST6Q96QI5 342 aa12.64□□□□□ -0.39
SEC31A-219ENST00000506497 FBXO22Q8NEZ5 403 aa12.63□□□□□ -0.39
SEC31A-219ENST00000506497 LAMC3Q9Y6N6 1575 aa12.63□□□□□ -0.39
SEC31A-219ENST00000506497 CUX1P39880 1505 aa12.62□□□□□ -0.39
SEC31A-219ENST00000506497 SOGA1O94964 1423 aa12.62□□□□□ -0.39
SEC31A-219ENST00000506497 RIMBP2O15034 1052 aa12.61□□□□□ -0.39
SEC31A-219ENST00000506497 PRKCSHP14314 528 aaPredicted RBP12.61□□□□□ -0.39
SEC31A-219ENST00000506497 MFRPQ9BY79 579 aa12.61□□□□□ -0.39
SEC31A-219ENST00000506497 FANCD2Q9BXW9 1451 aa12.59□□□□□ -0.39
SEC31A-219ENST00000506497 POTEB3A0JP26 581 aa12.59□□□□□ -0.39
SEC31A-219ENST00000506497 HOXB1P14653 301 aaPredicted RBP12.59□□□□□ -0.39
SEC31A-219ENST00000506497 POTEBQ6S5H4 581 aa12.59□□□□□ -0.39
SEC31A-219ENST00000506497 VSIG10Q8N0Z9 540 aa12.59□□□□□ -0.39
SEC31A-219ENST00000506497 PDS5BQ9NTI5 1447 aa12.55□□□□□ -0.4
SEC31A-219ENST00000506497 GOLGA3Q08378 1498 aa12.55□□□□□ -0.4
SEC31A-219ENST00000506497 CEP164Q9UPV0 1460 aa12.55□□□□□ -0.4
SEC31A-219ENST00000506497 SPNS2Q8IVW8 549 aa12.55□□□□□ -0.4
SEC31A-219ENST00000506497 ERBB3P21860 1342 aa12.55□□□□□ -0.4
SEC31A-219ENST00000506497 KIF21BO75037 1637 aa12.54□□□□□ -0.4
SEC31A-219ENST00000506497 KIF27Q86VH2 1401 aa12.53□□□□□ -0.4
SEC31A-219ENST00000506497 RUSC2Q8N2Y8 1516 aa12.52□□□□□ -0.4
SEC31A-219ENST00000506497 DNMBPQ6XZF7 1577 aa12.52□□□□□ -0.4
SEC31A-219ENST00000506497 TNIKQ9UKE5 1360 aa12.51□□□□□ -0.41
SEC31A-219ENST00000506497 NESP48681 1621 aa12.51□□□□□ -0.41
SEC31A-219ENST00000506497 MMRN1Q13201 1228 aa12.5□□□□□ -0.41
SEC31A-219ENST00000506497 KRTAP3-3Q9BYR6 98 aa12.5□□□□□ -0.41
SEC31A-219ENST00000506497 KRTAP3-2Q9BYR7 98 aa12.5□□□□□ -0.41
SEC31A-219ENST00000506497 ZSWIM6Q9HCJ5 1215 aa12.5□□□□□ -0.41
SEC31A-219ENST00000506497 FGD5Q6ZNL6 1462 aa12.48□□□□□ -0.41
SEC31A-219ENST00000506497 TOPBP1Q92547 1522 aa12.47□□□□□ -0.41
SEC31A-219ENST00000506497 VARS2Q5ST30 1063 aaKnown RBP12.46□□□□□ -0.41
SEC31A-219ENST00000506497 ERICH3Q5RHP9 1530 aa12.46□□□□□ -0.42
SEC31A-219ENST00000506497 GPR153Q6NV75 609 aa12.45□□□□□ -0.42
SEC31A-219ENST00000506497 C2orf72A6NCS6 295 aa12.44□□□□□ -0.42
SEC31A-219ENST00000506497 ARSIQ5FYB1 569 aa12.44□□□□□ -0.42
SEC31A-219ENST00000506497 CUX2O14529 1486 aa12.43□□□□□ -0.42
SEC31A-219ENST00000506497 UBTFP17480 764 aaKnown RBP12.43□□□□□ -0.42
SEC31A-219ENST00000506497 CEP162Q5TB80 1403 aa12.43□□□□□ -0.42
SEC31A-219ENST00000506497 PRXQ9BXM0 1461 aa12.42□□□□□ -0.42
SEC31A-219ENST00000506497 POLA1P09884 1462 aaPredicted RBP12.4□□□□□ -0.42
SEC31A-219ENST00000506497 KIF3CO14782 793 aa12.4□□□□□ -0.42
SEC31A-219ENST00000506497 PPP1R37O75864 691 aa12.4□□□□□ -0.42
SEC31A-219ENST00000506497 TMC2Q8TDI7 906 aa12.4□□□□□ -0.42
SEC31A-219ENST00000506497 URB2Q14146 1524 aaKnown RBP12.4□□□□□ -0.42
SEC31A-219ENST00000506497 ABCA10Q8WWZ4 1543 aa12.4□□□□□ -0.42
SEC31A-219ENST00000506497 TPRNQ4KMQ1 711 aa12.39□□□□□ -0.43
SEC31A-219ENST00000506497 KHSRPQ92945 711 aaKnown RBP eCLIP12.39□□□□□ -0.431e-6■■■□□ 15.4
SEC31A-219ENST00000506497 CHGAP10645 457 aaKnown RBP12.38□□□□□ -0.43
SEC31A-219ENST00000506497 HS6ST3Q8IZP7 471 aa12.38□□□□□ -0.43
SEC31A-219ENST00000506497 RAPGEF2Q9Y4G8 1499 aa12.38□□□□□ -0.43
SEC31A-219ENST00000506497 KIF21AQ7Z4S6 1674 aa12.38□□□□□ -0.43
SEC31A-219ENST00000506497 MRC2Q9UBG0 1479 aa12.37□□□□□ -0.43
SEC31A-219ENST00000506497 ZNF687Q8N1G0 1237 aa12.34□□□□□ -0.43
SEC31A-219ENST00000506497 IGF1RP08069 1367 aa12.32□□□□□ -0.44
SEC31A-219ENST00000506497 CLIP1P30622 1438 aa12.32□□□□□ -0.44
SEC31A-219ENST00000506497 RAD54L2Q9Y4B4 1467 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms