RNA–Protein interactions for RNA: ENST00000506396.1

CDH6-203, Transcript of cadherin 6, humanhuman

TSL 2

Gene CDH6, Length 2,759 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-203ENST00000506396 SMG6Q86US8 1419 aaKnown RBP24.28■■□□□ 1.48
CDH6-203ENST00000506396 RSPH6AQ9H0K4 717 aa24.27■■□□□ 1.48
CDH6-203ENST00000506396 RAD54L2Q9Y4B4 1467 aa24.27■■□□□ 1.48
CDH6-203ENST00000506396 FOXD1Q16676 465 aa24.26■■□□□ 1.47
CDH6-203ENST00000506396 SUPT6HQ7KZ85 1726 aaKnown RBP24.26■■□□□ 1.47
CDH6-203ENST00000506396 KIF7Q2M1P5 1343 aa24.25■■□□□ 1.47
CDH6-203ENST00000506396 LRRIQ1Q96JM4 1722 aa24.25■■□□□ 1.47
CDH6-203ENST00000506396 CNGB1Q14028 1251 aaPredicted RBP24.25■■□□□ 1.47
CDH6-203ENST00000506396 MPHOSPH9Q99550 1183 aa24.25■■□□□ 1.47
CDH6-203ENST00000506396 NUDCQ9Y266 331 aa24.24■■□□□ 1.47
CDH6-203ENST00000506396 NBPF8Q3BBV2 869 aa24.22■■□□□ 1.47
CDH6-203ENST00000506396 KDM6BO15054 1643 aa24.21■■□□□ 1.47
CDH6-203ENST00000506396 GCC2Q8IWJ2 1684 aa24.21■■□□□ 1.47
CDH6-203ENST00000506396 EHBP1L1Q8N3D4 1523 aa24.21■■□□□ 1.47
CDH6-203ENST00000506396 CC2D2AQ9P2K1 1620 aa24.19■■□□□ 1.46
CDH6-203ENST00000506396 ABCA10Q8WWZ4 1543 aa24.19■■□□□ 1.46
CDH6-203ENST00000506396 CUL7Q14999 1698 aa24.18■■□□□ 1.46
CDH6-203ENST00000506396 GRIN2BQ13224 1484 aa24.18■■□□□ 1.46
CDH6-203ENST00000506396 UGGT2Q9NYU1 1516 aa24.18■■□□□ 1.46
CDH6-203ENST00000506396 SENP3-EIF4A1A0A087X0R7 540 aa24.18■■□□□ 1.46
CDH6-203ENST00000506396 RNF123Q5XPI4 1314 aa24.18■■□□□ 1.46
CDH6-203ENST00000506396 FRAT1Q92837 279 aaPredicted RBP24.17■■□□□ 1.46
CDH6-203ENST00000506396 PDE4AP27815 886 aa24.14■■□□□ 1.45
CDH6-203ENST00000506396 FANCD2Q9BXW9 1451 aa24.13■■□□□ 1.45
CDH6-203ENST00000506396 SPATA31E1Q6ZUB1 1445 aa24.13■■□□□ 1.45
CDH6-203ENST00000506396 GLIPR1L2Q4G1C9 344 aa24.13■■□□□ 1.45
CDH6-203ENST00000506396 POLA1P09884 1462 aaPredicted RBP24.12■■□□□ 1.45
CDH6-203ENST00000506396 ABCA5Q8WWZ7 1642 aa24.12■■□□□ 1.45
CDH6-203ENST00000506396 SAMD9Q5K651 1589 aa24.12■■□□□ 1.45
CDH6-203ENST00000506396 TCOF1Q13428 1488 aaKnown RBP24.12■■□□□ 1.45
CDH6-203ENST00000506396 POLR3GLQ9BT43 218 aa24.11■■□□□ 1.45
CDH6-203ENST00000506396 MAGI3Q5TCQ9 1506 aa24.11■■□□□ 1.45
CDH6-203ENST00000506396 THOC2Q8NI27 1593 aaKnown RBP24.11■■□□□ 1.45
CDH6-203ENST00000506396 ARHGEF11O15085 1522 aa24.11■■□□□ 1.45
CDH6-203ENST00000506396 NFKBIBQ15653 356 aa24.1■■□□□ 1.45
CDH6-203ENST00000506396 RPRD2Q5VT52 1461 aaKnown RBP24.1■■□□□ 1.45
CDH6-203ENST00000506396 FAM43AQ8N2R8 423 aa24.09■■□□□ 1.45
CDH6-203ENST00000506396 TEX14Q8IWB6 1497 aa24.09■■□□□ 1.45
CDH6-203ENST00000506396 TCERG1O14776 1098 aaKnown RBP24.09■■□□□ 1.45
CDH6-203ENST00000506396 POLR1AO95602 1720 aaPredicted RBP24.09■■□□□ 1.45
CDH6-203ENST00000506396 DNMBPQ6XZF7 1577 aa24.08■■□□□ 1.45
CDH6-203ENST00000506396 DHX29Q7Z478 1369 aaKnown RBP24.08■■□□□ 1.44
CDH6-203ENST00000506396 ANKRD30BQ9BXX2 1392 aa24.08■■□□□ 1.44
CDH6-203ENST00000506396 BACH2Q9BYV9 841 aa24.06■■□□□ 1.44
CDH6-203ENST00000506396 VSIG10Q8N0Z9 540 aa24.06■■□□□ 1.44
CDH6-203ENST00000506396 ZMYND15Q9H091 742 aa24.05■■□□□ 1.44
CDH6-203ENST00000506396 TOPBP1Q92547 1522 aa24.04■■□□□ 1.44
CDH6-203ENST00000506396 DDRGK1Q96HY6 314 aa24■■□□□ 1.43
CDH6-203ENST00000506396 SLC4A1APQ9BWU0 796 aaKnown RBP23.99■■□□□ 1.43
CDH6-203ENST00000506396 TMC1Q8TDI8 760 aa23.98■■□□□ 1.43
CDH6-203ENST00000506396 PNISRQ8TF01 805 aaKnown RBP23.98■■□□□ 1.43
CDH6-203ENST00000506396 MIA2Q96PC5 1412 aa23.98■■□□□ 1.43
CDH6-203ENST00000506396 DCAF11Q8TEB1 546 aa23.97■■□□□ 1.43
CDH6-203ENST00000506396 SLC4A3P48751 1232 aa23.96■■□□□ 1.43
CDH6-203ENST00000506396 ZNF326Q5BKZ1 582 aaKnown RBP23.95■■□□□ 1.42
CDH6-203ENST00000506396 EXOC6Q8TAG9 804 aa23.94■■□□□ 1.42
CDH6-203ENST00000506396 USP47Q96K76 1375 aa23.94■■□□□ 1.42
CDH6-203ENST00000506396 ARID3CA6NKF2 412 aa23.93■■□□□ 1.42
CDH6-203ENST00000506396 MS4A1P11836 297 aa23.93■■□□□ 1.42
CDH6-203ENST00000506396 RRP1P56182 461 aaKnown RBP23.93■■□□□ 1.42
CDH6-203ENST00000506396 TDRD9Q8NDG6 1382 aaKnown RBP23.92■■□□□ 1.42
CDH6-203ENST00000506396 BCORL1Q5H9F3 1711 aa23.92■■□□□ 1.42
CDH6-203ENST00000506396 DAXXQ9UER7 740 aaPredicted RBP23.91■■□□□ 1.42
CDH6-203ENST00000506396 KIF21AQ7Z4S6 1674 aa23.89■■□□□ 1.41
CDH6-203ENST00000506396 EPRSP07814 1512 aaKnown RBP23.88■■□□□ 1.41
CDH6-203ENST00000506396 DAPK1P53355 1430 aa23.88■■□□□ 1.41
CDH6-203ENST00000506396 CDK13Q14004 1512 aaKnown RBP23.87■■□□□ 1.41
CDH6-203ENST00000506396 ROCK1Q13464 1354 aa23.87■■□□□ 1.41
CDH6-203ENST00000506396 NESP48681 1621 aa23.85■■□□□ 1.41
CDH6-203ENST00000506396 FRAT2O75474 233 aaPredicted RBP23.85■■□□□ 1.41
CDH6-203ENST00000506396 RCAN3Q9UKA8 241 aa23.85■■□□□ 1.41
CDH6-203ENST00000506396 PODXL2Q9NZ53 605 aa23.84■■□□□ 1.41
CDH6-203ENST00000506396 PLEKHG5O94827 1062 aa23.84■■□□□ 1.41
CDH6-203ENST00000506396 RRAGDQ9NQL2 400 aaPredicted RBP23.83■■□□□ 1.4
CDH6-203ENST00000506396 GAPVD1Q14C86 1478 aa23.83■■□□□ 1.4
CDH6-203ENST00000506396 LRPPRCP42704 1394 aaKnown RBP23.82■■□□□ 1.4
CDH6-203ENST00000506396 ABCC5O15440 1437 aa23.82■■□□□ 1.4
CDH6-203ENST00000506396 ARID4BQ4LE39 1312 aaPredicted RBP23.82■■□□□ 1.4
CDH6-203ENST00000506396 MBD5Q9P267 1494 aa23.81■■□□□ 1.4
CDH6-203ENST00000506396 ZNF644Q9H582 1327 aaPredicted RBP23.8■■□□□ 1.4
CDH6-203ENST00000506396 KIF15Q9NS87 1388 aa23.8■■□□□ 1.4
CDH6-203ENST00000506396 SKAP1Q86WV1 359 aa23.8■■□□□ 1.4
CDH6-203ENST00000506396 ROCK2O75116 1388 aaKnown RBP23.79■■□□□ 1.4
CDH6-203ENST00000506396 HSP90AA2PQ14568 343 aaPredicted RBP23.79■■□□□ 1.4
CDH6-203ENST00000506396 KDM5CP41229 1560 aa23.78■■□□□ 1.4
CDH6-203ENST00000506396 LAMC3Q9Y6N6 1575 aa23.77■■□□□ 1.4
CDH6-203ENST00000506396 BRD4O60885 1362 aaPredicted RBP23.77■■□□□ 1.4
CDH6-203ENST00000506396 MYBBP1AQ9BQG0 1328 aaKnown RBP23.77■■□□□ 1.4
CDH6-203ENST00000506396 DNMT1P26358 1616 aaKnown RBP23.77■■□□□ 1.4
CDH6-203ENST00000506396 PZPP20742 1482 aa23.77■■□□□ 1.4
CDH6-203ENST00000506396 NAP1L5Q96NT1 182 aaPredicted RBP23.76■■□□□ 1.39
CDH6-203ENST00000506396 KIF14Q15058 1648 aa23.76■■□□□ 1.39
CDH6-203ENST00000506396 URB2Q14146 1524 aaKnown RBP23.74■■□□□ 1.39
CDH6-203ENST00000506396 CARD11Q9BXL7 1154 aa23.72■■□□□ 1.39
CDH6-203ENST00000506396 RALBP1Q15311 655 aa23.71■■□□□ 1.39
CDH6-203ENST00000506396 KIAA1107Q9UPP5 1409 aa23.7■■□□□ 1.38
CDH6-203ENST00000506396 HSP90AA1P07900 732 aaKnown RBP23.7■■□□□ 1.38
CDH6-203ENST00000506396 WDR62O43379 1518 aa23.7■■□□□ 1.38
CDH6-203ENST00000506396 RRP9O43818 475 aaKnown RBP23.69■■□□□ 1.38
CDH6-203ENST00000506396 PKD2Q13563 968 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms