RNA–Protein interactions for RNA: ENST00000506272.5

SNCAIP-208, Transcript of synuclein alpha interacting protein, humanhuman

TSL 4

Gene SNCAIP, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-208ENST00000506272 ATN1P54259 1190 aaPredicted RBP9.43□□□□□ -0.9
SNCAIP-208ENST00000506272 GOLGA2Q08379 1002 aa9.43□□□□□ -0.9
SNCAIP-208ENST00000506272 TRIM35Q9UPQ4 493 aa9.43□□□□□ -0.9
SNCAIP-208ENST00000506272 DCBLD2Q96PD2 775 aa9.42□□□□□ -0.9
SNCAIP-208ENST00000506272 GTPBP6O43824 516 aaPredicted RBP9.41□□□□□ -0.9
SNCAIP-208ENST00000506272 SOX12O15370 315 aa9.4□□□□□ -0.9
SNCAIP-208ENST00000506272 MKRN3Q13064 507 aaKnown RBP9.4□□□□□ -0.9
SNCAIP-208ENST00000506272 MFRPQ9BY79 579 aa9.4□□□□□ -0.9
SNCAIP-208ENST00000506272 DNMBPQ6XZF7 1577 aa9.39□□□□□ -0.91
SNCAIP-208ENST00000506272 TOPBP1Q92547 1522 aa9.38□□□□□ -0.91
SNCAIP-208ENST00000506272 PHF8Q9UPP1 1060 aa9.38□□□□□ -0.91
SNCAIP-208ENST00000506272 POTEIP0CG38 1075 aa9.37□□□□□ -0.91
SNCAIP-208ENST00000506272 PELP1Q8IZL8 1130 aaKnown RBP9.37□□□□□ -0.91
SNCAIP-208ENST00000506272 NLRP6P59044 892 aa9.36□□□□□ -0.91
SNCAIP-208ENST00000506272 FBXO22Q8NEZ5 403 aa9.36□□□□□ -0.91
SNCAIP-208ENST00000506272 RYDENQ9NUL5 291 aaKnown RBP9.36□□□□□ -0.91
SNCAIP-208ENST00000506272 EIF4G3O43432 1585 aaKnown RBP9.33□□□□□ -0.92
SNCAIP-208ENST00000506272 CUX1P39880 1505 aa9.33□□□□□ -0.92
SNCAIP-208ENST00000506272 HAP1P54257 671 aaPredicted RBP9.33□□□□□ -0.92
SNCAIP-208ENST00000506272 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.33□□□□□ -0.92
SNCAIP-208ENST00000506272 TARBP1Q13395 1621 aaKnown RBP9.32□□□□□ -0.92
SNCAIP-208ENST00000506272 IER5LQ5T953 404 aa9.32□□□□□ -0.92
SNCAIP-208ENST00000506272 ILDR1Q86SU0 546 aaPredicted RBP9.32□□□□□ -0.92
SNCAIP-208ENST00000506272 MS4A4AQ96JQ5 239 aa9.32□□□□□ -0.92
SNCAIP-208ENST00000506272 ZNF608Q9ULD9 1512 aaPredicted RBP9.31□□□□□ -0.92
SNCAIP-208ENST00000506272 ABCC8Q09428 1581 aa9.31□□□□□ -0.92
SNCAIP-208ENST00000506272 WDR97A6NE52 1622 aa9.31□□□□□ -0.92
SNCAIP-208ENST00000506272 POLA1P09884 1462 aaPredicted RBP9.3□□□□□ -0.92
SNCAIP-208ENST00000506272 IRX5P78411 483 aaPredicted RBP9.3□□□□□ -0.92
SNCAIP-208ENST00000506272 FGD5Q6ZNL6 1462 aa9.29□□□□□ -0.92
SNCAIP-208ENST00000506272 IFT140Q96RY7 1462 aa9.29□□□□□ -0.92
SNCAIP-208ENST00000506272 PPP1R37O75864 691 aa9.29□□□□□ -0.92
SNCAIP-208ENST00000506272 SLC39A7Q92504 469 aa9.29□□□□□ -0.92
SNCAIP-208ENST00000506272 OCEL1Q9H607 264 aa9.28□□□□□ -0.92
SNCAIP-208ENST00000506272 TSHZ2Q9NRE2 1034 aa9.28□□□□□ -0.92
SNCAIP-208ENST00000506272 SYNJ1O43426 1573 aa9.28□□□□□ -0.92
SNCAIP-208ENST00000506272 CHD1O14646 1710 aa9.28□□□□□ -0.92
SNCAIP-208ENST00000506272 RAD54L2Q9Y4B4 1467 aa9.28□□□□□ -0.92
SNCAIP-208ENST00000506272 BIVM-ERCC5R4GMW8 1640 aa9.27□□□□□ -0.92
SNCAIP-208ENST00000506272 C7P10643 843 aa9.27□□□□□ -0.93
SNCAIP-208ENST00000506272 PDCD7Q8N8D1 485 aaKnown RBP9.27□□□□□ -0.93
SNCAIP-208ENST00000506272 PBRM1Q86U86 1689 aa9.26□□□□□ -0.93
SNCAIP-208ENST00000506272 DPY19L2Q6NUT2 758 aa9.25□□□□□ -0.93
SNCAIP-208ENST00000506272 METRNQ9UJH8 293 aa9.25□□□□□ -0.93
SNCAIP-208ENST00000506272 COLQQ9Y215 455 aaPredicted RBP9.25□□□□□ -0.93
SNCAIP-208ENST00000506272 TOP2BQ02880 1626 aa9.24□□□□□ -0.93
SNCAIP-208ENST00000506272 POTEFA5A3E0 1075 aa9.24□□□□□ -0.93
SNCAIP-208ENST00000506272 SEC24BO95487 1268 aa9.24□□□□□ -0.93
SNCAIP-208ENST00000506272 PLCG2P16885 1265 aa9.24□□□□□ -0.93
SNCAIP-208ENST00000506272 AQRO60306 1485 aaKnown RBP eCLIP9.22□□□□□ -0.93
SNCAIP-208ENST00000506272 SOGA1O94964 1423 aa9.21□□□□□ -0.94
SNCAIP-208ENST00000506272 ABCA5Q8WWZ7 1642 aa9.2□□□□□ -0.94
SNCAIP-208ENST00000506272 WRNQ14191 1432 aaPredicted RBP eCLIP9.2□□□□□ -0.94
SNCAIP-208ENST00000506272 CADPS2Q86UW7 1296 aa9.18□□□□□ -0.94
SNCAIP-208ENST00000506272 VSIG10Q8N0Z9 540 aa9.18□□□□□ -0.94
SNCAIP-208ENST00000506272 TDRD9Q8NDG6 1382 aaKnown RBP9.18□□□□□ -0.94
SNCAIP-208ENST00000506272 SNAPC4Q5SXM2 1469 aa9.17□□□□□ -0.94
SNCAIP-208ENST00000506272 KDM2AQ9Y2K7 1162 aa9.17□□□□□ -0.94
SNCAIP-208ENST00000506272 L3MBTL3Q96JM7 780 aaPredicted RBP9.16□□□□□ -0.94
SNCAIP-208ENST00000506272 BOLA1Q9Y3E2 137 aa9.16□□□□□ -0.94
SNCAIP-208ENST00000506272 ABCA10Q8WWZ4 1543 aa9.15□□□□□ -0.94
SNCAIP-208ENST00000506272 MICALL2Q8IY33 904 aa9.15□□□□□ -0.94
SNCAIP-208ENST00000506272 TMEM121BQ9BXQ6 578 aaPredicted RBP9.14□□□□□ -0.95
SNCAIP-208ENST00000506272 G3V3G9 751 aa9.13□□□□□ -0.95
SNCAIP-208ENST00000506272 GAPVD1Q14C86 1478 aa9.13□□□□□ -0.95
SNCAIP-208ENST00000506272 ADAMTS12P58397 1594 aa9.12□□□□□ -0.95
SNCAIP-208ENST00000506272 GRIN2BQ13224 1484 aa9.12□□□□□ -0.95
SNCAIP-208ENST00000506272 MAGI1Q96QZ7 1491 aaPredicted RBP9.11□□□□□ -0.95
SNCAIP-208ENST00000506272 RIMBP3CA6NJZ7 1639 aa9.11□□□□□ -0.95
SNCAIP-208ENST00000506272 RIMBP3BA6NNM3 1639 aa9.11□□□□□ -0.95
SNCAIP-208ENST00000506272 RIMBP3Q9UFD9 1639 aa9.11□□□□□ -0.95
SNCAIP-208ENST00000506272 POTEB2H3BUK9 544 aa9.09□□□□□ -0.95
SNCAIP-208ENST00000506272 NCKAP5LQ9HCH0 1330 aa9.08□□□□□ -0.96
SNCAIP-208ENST00000506272 SYNJ2O15056 1496 aa9.08□□□□□ -0.96
SNCAIP-208ENST00000506272 CLASP1Q7Z460 1538 aa9.07□□□□□ -0.96
SNCAIP-208ENST00000506272 POTEJP0CG39 1038 aa9.07□□□□□ -0.96
SNCAIP-208ENST00000506272 PDE4AP27815 886 aa9.07□□□□□ -0.96
SNCAIP-208ENST00000506272 CRISPLD2Q9H0B8 497 aa9.07□□□□□ -0.96
SNCAIP-208ENST00000506272 ERICH3Q5RHP9 1530 aa9.05□□□□□ -0.96
SNCAIP-208ENST00000506272 CEP170Q5SW79 1584 aa9.05□□□□□ -0.96
SNCAIP-208ENST00000506272 LARP6Q9BRS8 491 aaKnown RBP9.05□□□□□ -0.96
SNCAIP-208ENST00000506272 ARHGEF11O15085 1522 aa9.05□□□□□ -0.96
SNCAIP-208ENST00000506272 TMEM92Q6UXU6 159 aa9.04□□□□□ -0.96
SNCAIP-208ENST00000506272 GPHNQ9NQX3 736 aaPredicted RBP9.04□□□□□ -0.96
SNCAIP-208ENST00000506272 CUL7Q14999 1698 aa9.04□□□□□ -0.96
SNCAIP-208ENST00000506272 GRIN2AQ12879 1464 aa9.03□□□□□ -0.96
SNCAIP-208ENST00000506272 C3orf67Q6ZVT6 689 aa9.03□□□□□ -0.96
SNCAIP-208ENST00000506272 WDR70Q9NW82 654 aa9.03□□□□□ -0.96
SNCAIP-208ENST00000506272 MFSD10Q14728 455 aa9.02□□□□□ -0.97
SNCAIP-208ENST00000506272 TMC2Q8TDI7 906 aa9.02□□□□□ -0.97
SNCAIP-208ENST00000506272 CHMP7Q8WUX9 453 aaPredicted RBP9.02□□□□□ -0.97
SNCAIP-208ENST00000506272 C2orf72A6NCS6 295 aa9.01□□□□□ -0.97
SNCAIP-208ENST00000506272 KIF3CO14782 793 aa9.01□□□□□ -0.97
SNCAIP-208ENST00000506272 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.01□□□□□ -0.97
SNCAIP-208ENST00000506272 FHAD1B1AJZ9 1412 aa9□□□□□ -0.97
SNCAIP-208ENST00000506272 DDX27Q96GQ7 796 aaKnown RBP9□□□□□ -0.97
SNCAIP-208ENST00000506272 RUSC2Q8N2Y8 1516 aa9□□□□□ -0.97
SNCAIP-208ENST00000506272 KIF27Q86VH2 1401 aa8.99□□□□□ -0.97
SNCAIP-208ENST00000506272 ERCC6L2Q5T890 1561 aa8.99□□□□□ -0.97
SNCAIP-208ENST00000506272 ARAP1Q96P48 1450 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms