RNA–Protein interactions for RNA: ENST00000505220.1

RBM47-204, Transcript of RNA binding motif protein 47, human

TSL 2

Gene RBM47, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM47-204	ENST00000505220	SCAPER	Q9BY12	1400 aa		28.66	■■■□□ 2.18
RBM47-204	ENST00000505220	DMRT2	Q9Y5R5	561 aa		28.64	■■■□□ 2.18
RBM47-204	ENST00000505220	PREX1	Q8TCU6	1659 aa		28.63	■■■□□ 2.17
RBM47-204	ENST00000505220	ATP10A	O60312	1499 aa		28.62	■■■□□ 2.17
RBM47-204	ENST00000505220	ARHGEF12	Q9NZN5	1544 aa		28.62	■■■□□ 2.17
RBM47-204	ENST00000505220	C9orf84	Q5VXU9	1444 aa		28.61	■■■□□ 2.17
RBM47-204	ENST00000505220	PLCH2	O75038	1416 aa		28.6	■■■□□ 2.17
RBM47-204	ENST00000505220	SOCS7	O14512	581 aa		28.58	■■■□□ 2.17
RBM47-204	ENST00000505220	ILDR2	Q71H61	639 aa		28.56	■■■□□ 2.16
RBM47-204	ENST00000505220	CDK13	Q14004	1512 aa	Known RBP	28.55	■■■□□ 2.16
RBM47-204	ENST00000505220	EEA1	Q15075	1411 aa		28.55	■■■□□ 2.16
RBM47-204	ENST00000505220	CEBPA	P49715	358 aa	Predicted RBP	28.55	■■■□□ 2.16
RBM47-204	ENST00000505220	UHRF1BP1	Q6BDS2	1440 aa		28.54	■■■□□ 2.16
RBM47-204	ENST00000505220	EFCAB2	Q5VUJ9	269 aa		28.53	■■■□□ 2.16
RBM47-204	ENST00000505220	MYT1L	Q9UL68	1186 aa		28.48	■■■□□ 2.15
RBM47-204	ENST00000505220	ZNF518A	Q6AHZ1	1483 aa		28.46	■■■□□ 2.15
RBM47-204	ENST00000505220	ATP1B4	Q9UN42	357 aa	Predicted RBP	28.46	■■■□□ 2.15
RBM47-204	ENST00000505220	STRC	Q7RTU9	1775 aa		28.46	■■■□□ 2.15
RBM47-204	ENST00000505220	MYO5C	Q9NQX4	1742 aa		28.46	■■■□□ 2.15
RBM47-204	ENST00000505220	CDK11A	Q9UQ88	783 aa	Predicted RBP	28.45	■■■□□ 2.14
RBM47-204	ENST00000505220	SPATA31D1	Q6ZQQ2	1576 aa		28.43	■■■□□ 2.14
RBM47-204	ENST00000505220	ESF1	Q9H501	851 aa	Known RBP	28.41	■■■□□ 2.14
RBM47-204	ENST00000505220	PTPRT	O14522	1441 aa		28.4	■■■□□ 2.14
RBM47-204	ENST00000505220	AFAP1	Q8N556	730 aa		28.38	■■■□□ 2.13
RBM47-204	ENST00000505220	ARHGAP5	Q13017	1502 aa		28.38	■■■□□ 2.13
RBM47-204	ENST00000505220	SETD1B	Q9UPS6	1966 aa	Known RBP	28.37	■■■□□ 2.13
RBM47-204	ENST00000505220	KDM5C	P41229	1560 aa		28.37	■■■□□ 2.13
RBM47-204	ENST00000505220	KIF14	Q15058	1648 aa		28.36	■■■□□ 2.13
RBM47-204	ENST00000505220	FMN1	Q68DA7	1419 aa		28.36	■■■□□ 2.13
RBM47-204	ENST00000505220	DIP2C	Q9Y2E4	1556 aa		28.33	■■■□□ 2.13
RBM47-204	ENST00000505220	CLIP1	P30622	1438 aa		28.33	■■■□□ 2.13
RBM47-204	ENST00000505220	RERE	Q9P2R6	1566 aa		28.32	■■■□□ 2.12
RBM47-204	ENST00000505220	TRO	Q12816	1431 aa	Predicted RBP	28.3	■■■□□ 2.12
RBM47-204	ENST00000505220	C3	P01024	1663 aa		28.29	■■■□□ 2.12
RBM47-204	ENST00000505220	IQSEC2	Q5JU85	1478 aa		28.29	■■■□□ 2.12
RBM47-204	ENST00000505220	TRAPPC8	Q9Y2L5	1435 aa		28.28	■■■□□ 2.12
RBM47-204	ENST00000505220	MLH3	Q9UHC1	1453 aa		28.27	■■■□□ 2.12
RBM47-204	ENST00000505220	ABCA6	Q8N139	1617 aa		28.25	■■■□□ 2.11
RBM47-204	ENST00000505220	LTBP4	Q8N2S1	1624 aa		28.25	■■■□□ 2.11
RBM47-204	ENST00000505220	AGL	P35573	1532 aa		28.23	■■■□□ 2.11
RBM47-204	ENST00000505220	UBTF	P17480	764 aa	Known RBP	28.23	■■■□□ 2.11
RBM47-204	ENST00000505220	NCOA1	Q15788	1441 aa		28.23	■■■□□ 2.11
RBM47-204	ENST00000505220	CNTLN	Q9NXG0	1405 aa		28.23	■■■□□ 2.11
RBM47-204	ENST00000505220	EHMT2	Q96KQ7	1210 aa		28.19	■■■□□ 2.1
RBM47-204	ENST00000505220	ARHGAP35	Q9NRY4	1499 aa		28.18	■■■□□ 2.1
RBM47-204	ENST00000505220	ABCC1	P33527	1531 aa		28.15	■■■□□ 2.1
RBM47-204	ENST00000505220	CDC42BPB	Q9Y5S2	1711 aa		28.14	■■■□□ 2.1
RBM47-204	ENST00000505220	CAMSAP1	Q5T5Y3	1602 aa		28.13	■■■□□ 2.09
RBM47-204	ENST00000505220	PREX2	Q70Z35	1606 aa		28.11	■■■□□ 2.09
RBM47-204	ENST00000505220	NPAT	Q14207	1427 aa		28.11	■■■□□ 2.09
RBM47-204	ENST00000505220	ITSN2	Q9NZM3	1697 aa		28.1	■■■□□ 2.09
RBM47-204	ENST00000505220	UBAP1L	F5GYI3	381 aa		28.1	■■■□□ 2.09
RBM47-204	ENST00000505220	KIDINS220	Q9ULH0	1771 aa		28.06	■■■□□ 2.08
RBM47-204	ENST00000505220	NCKAP5L	Q9HCH0	1330 aa		28.06	■■■□□ 2.08
RBM47-204	ENST00000505220	MROH2A	A6NES4	1674 aa		28.05	■■■□□ 2.08
RBM47-204	ENST00000505220	ZMYM3	Q14202	1370 aa		28.05	■■■□□ 2.08
RBM47-204	ENST00000505220	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	28.05	■■■□□ 2.08
RBM47-204	ENST00000505220	LRRIQ1	Q96JM4	1722 aa		28.04	■■■□□ 2.08
RBM47-204	ENST00000505220	CCDC18	Q5T9S5	1454 aa		28.02	■■■□□ 2.08
RBM47-204	ENST00000505220	PKD2	Q13563	968 aa		28.02	■■■□□ 2.08
RBM47-204	ENST00000505220	ZNF777	Q9ULD5	760 aa	Predicted RBP	27.99	■■■□□ 2.07
RBM47-204	ENST00000505220	SPAG9	O60271	1321 aa	Known RBP	27.98	■■■□□ 2.07
RBM47-204	ENST00000505220	PLA2R1	Q13018	1463 aa		27.98	■■■□□ 2.07
RBM47-204	ENST00000505220	SAMD9L	Q8IVG5	1584 aa		27.98	■■■□□ 2.07
RBM47-204	ENST00000505220	CASKIN1	Q8WXD9	1431 aa		27.94	■■■□□ 2.06
RBM47-204	ENST00000505220	MYO3A	Q8NEV4	1616 aa		27.94	■■■□□ 2.06
RBM47-204	ENST00000505220	CDC42BPA	Q5VT25	1732 aa		27.94	■■■□□ 2.06
RBM47-204	ENST00000505220	ZNF142	P52746	1687 aa	Predicted RBP	27.93	■■■□□ 2.06
RBM47-204	ENST00000505220	SUPT6H	Q7KZ85	1726 aa	Known RBP	27.92	■■■□□ 2.06
RBM47-204	ENST00000505220	PPP6R1	Q9UPN7	881 aa		27.92	■■■□□ 2.06
RBM47-204	ENST00000505220	SYCP2	Q9BX26	1530 aa		27.92	■■■□□ 2.06
RBM47-204	ENST00000505220	CLTC	Q00610	1675 aa	Known RBP	27.91	■■■□□ 2.06
RBM47-204	ENST00000505220	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	27.91	■■■□□ 2.06
RBM47-204	ENST00000505220	TCOF1	Q13428	1488 aa	Known RBP	27.9	■■■□□ 2.06
RBM47-204	ENST00000505220	SCAF1	Q9H7N4	1312 aa	Known RBP	27.89	■■■□□ 2.05
RBM47-204	ENST00000505220	HNRNPM	P52272	730 aa	Known RBP eCLIP	27.88	■■■□□ 2.05
RBM47-204	ENST00000505220	PTPRK	Q15262	1439 aa		27.88	■■■□□ 2.05
RBM47-204	ENST00000505220	ATP7A	Q04656	1500 aa		27.87	■■■□□ 2.05
RBM47-204	ENST00000505220	GGT6	Q6P531	493 aa		27.87	■■■□□ 2.05
RBM47-204	ENST00000505220	A2M	P01023	1474 aa		27.87	■■■□□ 2.05
RBM47-204	ENST00000505220	PLXNC1	O60486	1568 aa		27.85	■■■□□ 2.05
RBM47-204	ENST00000505220	PLEKHH2	Q8IVE3	1493 aa		27.83	■■■□□ 2.05
RBM47-204	ENST00000505220	GPATCH8	Q9UKJ3	1502 aa	Known RBP	27.82	■■■□□ 2.04
RBM47-204	ENST00000505220	KIAA1107	Q9UPP5	1409 aa		27.82	■■■□□ 2.04
RBM47-204	ENST00000505220	TOM1	O60784	492 aa		27.81	■■■□□ 2.04
RBM47-204	ENST00000505220	PIP4K2B	P78356	416 aa		27.81	■■■□□ 2.04
RBM47-204	ENST00000505220	FYCO1	Q9BQS8	1478 aa		27.81	■■■□□ 2.04
RBM47-204	ENST00000505220	HSPA1L	P34931	641 aa		27.8	■■■□□ 2.04
RBM47-204	ENST00000505220	CFDP1	Q9UEE9	299 aa	Predicted RBP	27.8	■■■□□ 2.04
RBM47-204	ENST00000505220	INO80	Q9ULG1	1556 aa	Predicted RBP	27.8	■■■□□ 2.04
RBM47-204	ENST00000505220	MED1	Q15648	1581 aa	Predicted RBP	27.78	■■■□□ 2.04
RBM47-204	ENST00000505220	A2ML1	A8K2U0	1454 aa		27.78	■■■□□ 2.04
RBM47-204	ENST00000505220	CPS1	P31327	1500 aa		27.76	■■■□□ 2.03
RBM47-204	ENST00000505220	CCNB3	Q8WWL7	1395 aa		27.74	■■■□□ 2.03
RBM47-204	ENST00000505220	DNMT1	P26358	1616 aa	Known RBP	27.73	■■■□□ 2.03
RBM47-204	ENST00000505220	ADGB	Q8N7X0	1667 aa		27.72	■■■□□ 2.03
RBM47-204	ENST00000505220	PHF23	Q9BUL5	403 aa	Predicted RBP	27.71	■■■□□ 2.03
RBM47-204	ENST00000505220	SHANK2	Q9UPX8	1470 aa		27.69	■■■□□ 2.02
RBM47-204	ENST00000505220	POLR1A	O95602	1720 aa	Predicted RBP	27.67	■■■□□ 2.02
RBM47-204	ENST00000505220	TNR	Q92752	1358 aa		27.66	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 468.3 ms