RNA–Protein interactions for RNA: ENST00000504487.5

CCDC149-204, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC149, Length 3,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-204ENST00000504487 PHLDB1Q86UU1 1377 aa11.34□□□□□ -0.59
CCDC149-204ENST00000504487 EXOC6Q8TAG9 804 aa11.34□□□□□ -0.59
CCDC149-204ENST00000504487 NAP1L5Q96NT1 182 aaPredicted RBP11.34□□□□□ -0.59
CCDC149-204ENST00000504487 RSPH6AQ9H0K4 717 aa11.33□□□□□ -0.6
CCDC149-204ENST00000504487 HMGXB3Q12766 1538 aa11.31□□□□□ -0.6
CCDC149-204ENST00000504487 NFKBIBQ15653 356 aa11.31□□□□□ -0.6
CCDC149-204ENST00000504487 L3MBTL2Q969R5 705 aa11.31□□□□□ -0.6
CCDC149-204ENST00000504487 RCAN3Q9UKA8 241 aa11.31□□□□□ -0.6
CCDC149-204ENST00000504487 FRAT1Q92837 279 aaPredicted RBP11.31□□□□□ -0.6
CCDC149-204ENST00000504487 ARHGAP35Q9NRY4 1499 aa11.31□□□□□ -0.6
CCDC149-204ENST00000504487 POLA1P09884 1462 aaPredicted RBP11.31□□□□□ -0.6
CCDC149-204ENST00000504487 RGS3P49796 1198 aa11.3□□□□□ -0.6
CCDC149-204ENST00000504487 CNTLNQ9NXG0 1405 aa11.29□□□□□ -0.6
CCDC149-204ENST00000504487 TOPBP1Q92547 1522 aa11.29□□□□□ -0.6
CCDC149-204ENST00000504487 HNRNPMP52272 730 aaKnown RBP eCLIP11.29□□□□□ -0.6
CCDC149-204ENST00000504487 ZNF644Q9H582 1327 aaPredicted RBP11.27□□□□□ -0.6
CCDC149-204ENST00000504487 VSIG10Q8N0Z9 540 aa11.27□□□□□ -0.6
CCDC149-204ENST00000504487 RRP1P56182 461 aaKnown RBP11.27□□□□□ -0.61
CCDC149-204ENST00000504487 STAG3Q9UJ98 1225 aa11.27□□□□□ -0.61
CCDC149-204ENST00000504487 CCDC7Q96M83 1385 aa11.26□□□□□ -0.61
CCDC149-204ENST00000504487 FMN1Q68DA7 1419 aa11.26□□□□□ -0.61
CCDC149-204ENST00000504487 CCDC18Q5T9S5 1454 aa11.26□□□□□ -0.61
CCDC149-204ENST00000504487 PKNOX2Q96KN3 472 aa11.26□□□□□ -0.61
CCDC149-204ENST00000504487 BACH2Q9BYV9 841 aa11.26□□□□□ -0.61
CCDC149-204ENST00000504487 MS4A1P11836 297 aa11.26□□□□□ -0.61
CCDC149-204ENST00000504487 ESF1Q9H501 851 aaKnown RBP11.25□□□□□ -0.61
CCDC149-204ENST00000504487 PLIN1O60240 522 aa11.24□□□□□ -0.61
CCDC149-204ENST00000504487 CYB5RLQ6IPT4 315 aa11.24□□□□□ -0.61
CCDC149-204ENST00000504487 LRRC9Q6ZRR7 1453 aa11.24□□□□□ -0.61
CCDC149-204ENST00000504487 TOP2BQ02880 1626 aa11.24□□□□□ -0.61
CCDC149-204ENST00000504487 MLECQ14165 292 aa11.24□□□□□ -0.61
CCDC149-204ENST00000504487 PRXQ9BXM0 1461 aa11.24□□□□□ -0.61
CCDC149-204ENST00000504487 CARMIL2Q6F5E8 1435 aa11.24□□□□□ -0.61
CCDC149-204ENST00000504487 MPHOSPH9Q99550 1183 aa11.23□□□□□ -0.61
CCDC149-204ENST00000504487 SMG6Q86US8 1419 aaKnown RBP11.23□□□□□ -0.61
CCDC149-204ENST00000504487 C11orf95C9JLR9 678 aaPredicted RBP11.23□□□□□ -0.61
CCDC149-204ENST00000504487 KIF7Q2M1P5 1343 aa11.22□□□□□ -0.61
CCDC149-204ENST00000504487 BECN1Q14457 450 aa11.22□□□□□ -0.61
CCDC149-204ENST00000504487 CANXP27824 592 aaKnown RBP11.22□□□□□ -0.61
CCDC149-204ENST00000504487 PNNQ9H307 717 aaKnown RBP11.22□□□□□ -0.61
CCDC149-204ENST00000504487 UACAQ9BZF9 1416 aa11.22□□□□□ -0.61
CCDC149-204ENST00000504487 UPF2Q9HAU5 1272 aaKnown RBP11.21□□□□□ -0.61
CCDC149-204ENST00000504487 ERICH3Q5RHP9 1530 aa11.21□□□□□ -0.61
CCDC149-204ENST00000504487 FRAT2O75474 233 aaPredicted RBP11.21□□□□□ -0.61
CCDC149-204ENST00000504487 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.21□□□□□ -0.61
CCDC149-204ENST00000504487 SLKQ9H2G2 1235 aaPredicted RBP11.21□□□□□ -0.61
CCDC149-204ENST00000504487 HSP90AA1P07900 732 aaKnown RBP11.21□□□□□ -0.62
CCDC149-204ENST00000504487 ARID4BQ4LE39 1312 aaPredicted RBP11.21□□□□□ -0.62
CCDC149-204ENST00000504487 L1TD1Q5T7N2 865 aaKnown RBP11.2□□□□□ -0.62
CCDC149-204ENST00000504487 PEG3Q9GZU2 1588 aa11.2□□□□□ -0.62
CCDC149-204ENST00000504487 GGT6Q6P531 493 aa11.2□□□□□ -0.62
CCDC149-204ENST00000504487 HSP90AA2PQ14568 343 aaPredicted RBP11.19□□□□□ -0.62
CCDC149-204ENST00000504487 TRHP20396 242 aaPredicted RBP11.19□□□□□ -0.62
CCDC149-204ENST00000504487 PKD2Q13563 968 aa11.19□□□□□ -0.62
CCDC149-204ENST00000504487 SKAP1Q86WV1 359 aa11.19□□□□□ -0.62
CCDC149-204ENST00000504487 PLEKHG5O94827 1062 aa11.19□□□□□ -0.62
CCDC149-204ENST00000504487 FAM43AQ8N2R8 423 aa11.19□□□□□ -0.62
CCDC149-204ENST00000504487 CARD11Q9BXL7 1154 aa11.18□□□□□ -0.62
CCDC149-204ENST00000504487 WASHC2CQ9Y4E1 1318 aa11.18□□□□□ -0.62
CCDC149-204ENST00000504487 CRBNQ96SW2 442 aa11.18□□□□□ -0.62
CCDC149-204ENST00000504487 PTPRGP23470 1445 aa11.18□□□□□ -0.62
CCDC149-204ENST00000504487 GZF1Q9H116 711 aaPredicted RBP11.17□□□□□ -0.62
CCDC149-204ENST00000504487 DCAF11Q8TEB1 546 aa11.17□□□□□ -0.62
CCDC149-204ENST00000504487 URB2Q14146 1524 aaKnown RBP11.17□□□□□ -0.62
CCDC149-204ENST00000504487 ZNF608Q9ULD9 1512 aaPredicted RBP11.17□□□□□ -0.62
CCDC149-204ENST00000504487 TRIM44Q96DX7 344 aaPredicted RBP11.16□□□□□ -0.62
CCDC149-204ENST00000504487 TIAM1Q13009 1591 aa11.16□□□□□ -0.62
CCDC149-204ENST00000504487 MRC2Q9UBG0 1479 aa11.16□□□□□ -0.62
CCDC149-204ENST00000504487 FAM161AQ3B820 660 aa11.15□□□□□ -0.62
CCDC149-204ENST00000504487 FGD6Q6ZV73 1430 aa11.14□□□□□ -0.63
CCDC149-204ENST00000504487 SPRYD3Q8NCJ5 442 aa11.14□□□□□ -0.63
CCDC149-204ENST00000504487 PDE3BQ13370 1112 aa11.14□□□□□ -0.63
CCDC149-204ENST00000504487 WDR43Q15061 677 aaKnown RBP eCLIP11.14□□□□□ -0.63
CCDC149-204ENST00000504487 CC2D1BQ5T0F9 858 aaKnown RBP11.14□□□□□ -0.63
CCDC149-204ENST00000504487 PNISRQ8TF01 805 aaKnown RBP11.14□□□□□ -0.63
CCDC149-204ENST00000504487 GRIN2BQ13224 1484 aa11.14□□□□□ -0.63
CCDC149-204ENST00000504487 NBPF8Q3BBV2 869 aa11.13□□□□□ -0.63
CCDC149-204ENST00000504487 OSCARQ8IYS5 282 aa11.13□□□□□ -0.63
CCDC149-204ENST00000504487 SNAPC4Q5SXM2 1469 aa11.13□□□□□ -0.63
CCDC149-204ENST00000504487 CDCA7LQ96GN5 454 aa11.12□□□□□ -0.63
CCDC149-204ENST00000504487 NUP155O75694 1391 aa11.12□□□□□ -0.63
CCDC149-204ENST00000504487 DNMBPQ6XZF7 1577 aa11.12□□□□□ -0.63
CCDC149-204ENST00000504487 GOLGA6L3A6NEY3 463 aa11.11□□□□□ -0.63
CCDC149-204ENST00000504487 RALBP1Q15311 655 aa11.11□□□□□ -0.63
CCDC149-204ENST00000504487 NUTM2DQ5VT03 806 aaPredicted RBP11.11□□□□□ -0.63
CCDC149-204ENST00000504487 ANP32BQ92688 251 aaKnown RBP11.11□□□□□ -0.63
CCDC149-204ENST00000504487 EFCAB2Q5VUJ9 269 aa11.11□□□□□ -0.63
CCDC149-204ENST00000504487 KIF3BO15066 747 aa11.1□□□□□ -0.63
CCDC149-204ENST00000504487 CENPQQ7L2Z9 268 aaPredicted RBP11.1□□□□□ -0.63
CCDC149-204ENST00000504487 MYBBP1AQ9BQG0 1328 aaKnown RBP11.1□□□□□ -0.63
CCDC149-204ENST00000504487 SAFB2Q14151 953 aaKnown RBP eCLIP11.1□□□□□ -0.63
CCDC149-204ENST00000504487 NLRP13Q86W25 1043 aa11.1□□□□□ -0.63
CCDC149-204ENST00000504487 HFM1A2PYH4 1435 aa11.09□□□□□ -0.63
CCDC149-204ENST00000504487 POGKQ9P215 609 aa11.08□□□□□ -0.64
CCDC149-204ENST00000504487 USP47Q96K76 1375 aa11.08□□□□□ -0.64
CCDC149-204ENST00000504487 KIF15Q9NS87 1388 aa11.08□□□□□ -0.64
CCDC149-204ENST00000504487 PRDM2Q13029 1718 aa11.08□□□□□ -0.64
CCDC149-204ENST00000504487 NCOA1Q15788 1441 aa11.08□□□□□ -0.64
CCDC149-204ENST00000504487 ABCA10Q8WWZ4 1543 aa11.07□□□□□ -0.64
CCDC149-204ENST00000504487 PRG4Q92954 1404 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 156.1 ms