RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 TERF1P54274 439 aa7.86□□□□□ -1.15
LINC01340-201ENST00000504012 RRAGDQ9NQL2 400 aaPredicted RBP7.86□□□□□ -1.15
LINC01340-201ENST00000504012 LAS1LQ9Y4W2 734 aaKnown RBP7.86□□□□□ -1.15
LINC01340-201ENST00000504012 SOGA1O94964 1423 aa7.86□□□□□ -1.15
LINC01340-201ENST00000504012 BAZ1AQ9NRL2 1556 aaPredicted RBP7.85□□□□□ -1.15
LINC01340-201ENST00000504012 ZBTB22O15209 634 aa7.85□□□□□ -1.15
LINC01340-201ENST00000504012 CAPN15O75808 1086 aa7.85□□□□□ -1.15
LINC01340-201ENST00000504012 DSG3P32926 999 aa7.85□□□□□ -1.15
LINC01340-201ENST00000504012 DCAF11Q8TEB1 546 aa7.84□□□□□ -1.15
LINC01340-201ENST00000504012 SMAP1Q8IYB5 467 aaPredicted RBP7.83□□□□□ -1.16
LINC01340-201ENST00000504012 NAP1L5Q96NT1 182 aaPredicted RBP7.83□□□□□ -1.16
LINC01340-201ENST00000504012 CCDC9Q9Y3X0 531 aaKnown RBP7.83□□□□□ -1.16
LINC01340-201ENST00000504012 FHAD1B1AJZ9 1412 aa7.83□□□□□ -1.16
LINC01340-201ENST00000504012 SETD5Q9C0A6 1442 aa7.83□□□□□ -1.16
LINC01340-201ENST00000504012 CCNB3Q8WWL7 1395 aa7.83□□□□□ -1.16
LINC01340-201ENST00000504012 SLC4A2P04920 1241 aa7.82□□□□□ -1.16
LINC01340-201ENST00000504012 MTERF4Q7Z6M4 381 aaKnown RBP7.82□□□□□ -1.16
LINC01340-201ENST00000504012 CHMP4AQ9BY43 222 aa7.82□□□□□ -1.16
LINC01340-201ENST00000504012 NUDCQ9Y266 331 aa7.82□□□□□ -1.16
LINC01340-201ENST00000504012 NCOA2Q15596 1464 aa7.81□□□□□ -1.16
LINC01340-201ENST00000504012 A0A0U1RQG5 324 aaPredicted RBP7.81□□□□□ -1.16
LINC01340-201ENST00000504012 UTP14CQ5TAP6 766 aaKnown RBP7.81□□□□□ -1.16
LINC01340-201ENST00000504012 ISY1Q9ULR0 285 aaKnown RBP7.81□□□□□ -1.16
LINC01340-201ENST00000504012 RAB3GAP2Q9H2M9 1393 aa7.81□□□□□ -1.16
LINC01340-201ENST00000504012 MAP3K1Q13233 1512 aa7.79□□□□□ -1.16
LINC01340-201ENST00000504012 RSPH4AQ5TD94 716 aa7.79□□□□□ -1.16
LINC01340-201ENST00000504012 BCL11BQ9C0K0 894 aaPredicted RBP7.79□□□□□ -1.16
LINC01340-201ENST00000504012 MROH2BQ7Z745 1585 aa7.77□□□□□ -1.17
LINC01340-201ENST00000504012 FSD2A1L4K1 749 aa7.77□□□□□ -1.17
LINC01340-201ENST00000504012 IPO4Q8TEX9 1081 aaKnown RBP7.77□□□□□ -1.17
LINC01340-201ENST00000504012 CNTLNQ9NXG0 1405 aa7.77□□□□□ -1.17
LINC01340-201ENST00000504012 VGFO15240 615 aaPredicted RBP7.76□□□□□ -1.17
LINC01340-201ENST00000504012 SAMD1Q6SPF0 538 aaPredicted RBP7.76□□□□□ -1.17
LINC01340-201ENST00000504012 SYNJ1O43426 1573 aa7.76□□□□□ -1.17
LINC01340-201ENST00000504012 RUSC2Q8N2Y8 1516 aa7.75□□□□□ -1.17
LINC01340-201ENST00000504012 PUS7Q96PZ0 661 aaKnown RBP7.75□□□□□ -1.17
LINC01340-201ENST00000504012 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.74□□□□□ -1.17
LINC01340-201ENST00000504012 FBLN2P98095 1184 aa7.74□□□□□ -1.17
LINC01340-201ENST00000504012 PRKRIP1Q9H875 184 aaPredicted RBP7.74□□□□□ -1.17
LINC01340-201ENST00000504012 NAP1L2Q9ULW6 460 aaPredicted RBP7.74□□□□□ -1.17
LINC01340-201ENST00000504012 ARID4BQ4LE39 1312 aaPredicted RBP7.74□□□□□ -1.17
LINC01340-201ENST00000504012 TOP2AP11388 1531 aaKnown RBP7.73□□□□□ -1.17
LINC01340-201ENST00000504012 ESPNB1AK53 854 aa7.73□□□□□ -1.17
LINC01340-201ENST00000504012 FRAT2O75474 233 aaPredicted RBP7.73□□□□□ -1.17
LINC01340-201ENST00000504012 CANXP27824 592 aaKnown RBP7.73□□□□□ -1.17
LINC01340-201ENST00000504012 MRE11P49959 708 aa7.73□□□□□ -1.17
LINC01340-201ENST00000504012 CNGB1Q14028 1251 aaPredicted RBP7.73□□□□□ -1.17
LINC01340-201ENST00000504012 TAF3Q5VWG9 929 aa7.73□□□□□ -1.17
LINC01340-201ENST00000504012 WIZO95785 1651 aa7.73□□□□□ -1.17
LINC01340-201ENST00000504012 GOLGA6L3A6NEY3 463 aa7.72□□□□□ -1.17
LINC01340-201ENST00000504012 RGS3P49796 1198 aa7.72□□□□□ -1.17
LINC01340-201ENST00000504012 BBXQ8WY36 941 aaPredicted RBP7.72□□□□□ -1.17
LINC01340-201ENST00000504012 ERICH3Q5RHP9 1530 aa7.72□□□□□ -1.17
LINC01340-201ENST00000504012 ABCA5Q8WWZ7 1642 aa7.71□□□□□ -1.17
LINC01340-201ENST00000504012 AKNAQ7Z591 1439 aa7.71□□□□□ -1.17
LINC01340-201ENST00000504012 KIF20AO95235 890 aa7.71□□□□□ -1.18
LINC01340-201ENST00000504012 XRCC6P12956 609 aaKnown RBP eCLIP7.71□□□□□ -1.18
LINC01340-201ENST00000504012 SIN3AQ96ST3 1273 aa7.71□□□□□ -1.18
LINC01340-201ENST00000504012 GTF2E1P29083 439 aaPredicted RBP7.7□□□□□ -1.18
LINC01340-201ENST00000504012 TNNT2P45379 298 aaPredicted RBP7.7□□□□□ -1.18
LINC01340-201ENST00000504012 DMTNQ08495 405 aa7.7□□□□□ -1.18
LINC01340-201ENST00000504012 PDE3BQ13370 1112 aa7.7□□□□□ -1.18
LINC01340-201ENST00000504012 STAC3Q96MF2 364 aa7.7□□□□□ -1.18
LINC01340-201ENST00000504012 GTPBP4Q9BZE4 634 aaKnown RBP7.7□□□□□ -1.18
LINC01340-201ENST00000504012 MRS2Q9HD23 443 aa7.7□□□□□ -1.18
LINC01340-201ENST00000504012 PHLDB1Q86UU1 1377 aa7.7□□□□□ -1.18
LINC01340-201ENST00000504012 TONSLQ96HA7 1378 aa7.7□□□□□ -1.18
LINC01340-201ENST00000504012 ARAP1Q96P48 1450 aa7.69□□□□□ -1.18
LINC01340-201ENST00000504012 CECR2Q9BXF3 1484 aa7.69□□□□□ -1.18
LINC01340-201ENST00000504012 OFD1O75665 1012 aa7.69□□□□□ -1.18
LINC01340-201ENST00000504012 RRP1P56182 461 aaKnown RBP7.69□□□□□ -1.18
LINC01340-201ENST00000504012 FAM161AQ3B820 660 aa7.69□□□□□ -1.18
LINC01340-201ENST00000504012 CCDC144AA2RUR9 1427 aa7.69□□□□□ -1.18
LINC01340-201ENST00000504012 ABCB7O75027 752 aa7.68□□□□□ -1.18
LINC01340-201ENST00000504012 TRHP20396 242 aaPredicted RBP7.68□□□□□ -1.18
LINC01340-201ENST00000504012 KANK4Q5T7N3 995 aaPredicted RBP7.68□□□□□ -1.18
LINC01340-201ENST00000504012 NCOA1Q15788 1441 aa7.68□□□□□ -1.18
LINC01340-201ENST00000504012 SCRIBQ14160 1630 aa7.67□□□□□ -1.18
LINC01340-201ENST00000504012 ZBTB7CA1YPR0 619 aa7.67□□□□□ -1.18
LINC01340-201ENST00000504012 BECN1Q14457 450 aa7.67□□□□□ -1.18
LINC01340-201ENST00000504012 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.67□□□□□ -1.18
LINC01340-201ENST00000504012 MYH16Q9H6N6 1097 aa7.67□□□□□ -1.18
LINC01340-201ENST00000504012 BCCIPQ9P287 314 aaKnown RBP eCLIP7.67□□□□□ -1.18
LINC01340-201ENST00000504012 INSRP06213 1382 aa7.67□□□□□ -1.18
LINC01340-201ENST00000504012 LETM1O95202 739 aaPredicted RBP7.66□□□□□ -1.18
LINC01340-201ENST00000504012 CHRM1P11229 460 aaPredicted RBP7.66□□□□□ -1.18
LINC01340-201ENST00000504012 HS1BP3Q53T59 392 aa7.66□□□□□ -1.18
LINC01340-201ENST00000504012 FAM9BQ8IZU0 186 aa7.66□□□□□ -1.18
LINC01340-201ENST00000504012 POGKQ9P215 609 aa7.66□□□□□ -1.18
LINC01340-201ENST00000504012 CCDC7Q96M83 1385 aa7.66□□□□□ -1.18
LINC01340-201ENST00000504012 DYNC1I1O14576 645 aa7.65□□□□□ -1.18
LINC01340-201ENST00000504012 EIF4G2P78344 907 aaKnown RBP eCLIP7.65□□□□□ -1.18
LINC01340-201ENST00000504012 CCDC184Q52MB2 194 aa7.65□□□□□ -1.18
LINC01340-201ENST00000504012 FTSJ3Q8IY81 847 aaKnown RBP7.65□□□□□ -1.18
LINC01340-201ENST00000504012 SCAPERQ9BY12 1400 aa7.65□□□□□ -1.18
LINC01340-201ENST00000504012 ZNF219Q9P2Y4 722 aaPredicted RBP7.65□□□□□ -1.18
LINC01340-201ENST00000504012 KDM5BQ9UGL1 1544 aa7.65□□□□□ -1.18
LINC01340-201ENST00000504012 RAPGEF2Q9Y4G8 1499 aa7.65□□□□□ -1.18
LINC01340-201ENST00000504012 POLR1AO95602 1720 aaPredicted RBP7.64□□□□□ -1.19
LINC01340-201ENST00000504012 KTN1Q86UP2 1357 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms