RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 CDK13Q14004 1512 aaKnown RBP26.47■■□□□ 1.83
DDR1-250ENST00000503628 EEA1Q15075 1411 aa26.47■■□□□ 1.83
DDR1-250ENST00000503628 PLCH2O75038 1416 aa26.46■■□□□ 1.83
DDR1-250ENST00000503628 ATP10AO60312 1499 aa26.42■■□□□ 1.82
DDR1-250ENST00000503628 ARHGEF12Q9NZN5 1544 aa26.41■■□□□ 1.82
DDR1-250ENST00000503628 CEBPAP49715 358 aaPredicted RBP26.41■■□□□ 1.82
DDR1-250ENST00000503628 EFCAB2Q5VUJ9 269 aa26.38■■□□□ 1.81
DDR1-250ENST00000503628 C9orf84Q5VXU9 1444 aa26.38■■□□□ 1.81
DDR1-250ENST00000503628 PREX1Q8TCU6 1659 aa26.38■■□□□ 1.81
DDR1-250ENST00000503628 ATP1B4Q9UN42 357 aaPredicted RBP26.37■■□□□ 1.81
DDR1-250ENST00000503628 MYO5CQ9NQX4 1742 aa26.34■■□□□ 1.81
DDR1-250ENST00000503628 STRCQ7RTU9 1775 aa26.31■■□□□ 1.8
DDR1-250ENST00000503628 DMRT2Q9Y5R5 561 aa26.3■■□□□ 1.8
DDR1-250ENST00000503628 AFAP1Q8N556 730 aa26.29■■□□□ 1.8
DDR1-250ENST00000503628 CDK11AQ9UQ88 783 aaPredicted RBP26.28■■□□□ 1.8
DDR1-250ENST00000503628 SETD1BQ9UPS6 1966 aaKnown RBP26.27■■□□□ 1.8
DDR1-250ENST00000503628 KIF14Q15058 1648 aa26.26■■□□□ 1.79
DDR1-250ENST00000503628 ZNF518AQ6AHZ1 1483 aa26.26■■□□□ 1.79
DDR1-250ENST00000503628 DISP3Q9P2K9 1392 aa26.26■■□□□ 1.79
DDR1-250ENST00000503628 EHMT2Q96KQ7 1210 aa26.26■■□□□ 1.79
DDR1-250ENST00000503628 MYT1LQ9UL68 1186 aa26.26■■□□□ 1.79
DDR1-250ENST00000503628 UHRF1BP1Q6BDS2 1440 aa26.25■■□□□ 1.79
DDR1-250ENST00000503628 ILDR2Q71H61 639 aa26.25■■□□□ 1.79
DDR1-250ENST00000503628 FMN1Q68DA7 1419 aa26.24■■□□□ 1.79
DDR1-250ENST00000503628 ARHGAP5Q13017 1502 aa26.23■■□□□ 1.79
DDR1-250ENST00000503628 KDM5CP41229 1560 aa26.22■■□□□ 1.79
DDR1-250ENST00000503628 UBTFP17480 764 aaKnown RBP26.22■■□□□ 1.79
DDR1-250ENST00000503628 TROQ12816 1431 aaPredicted RBP26.2■■□□□ 1.78
DDR1-250ENST00000503628 DIP2CQ9Y2E4 1556 aa26.19■■□□□ 1.78
DDR1-250ENST00000503628 ARHGAP35Q9NRY4 1499 aa26.18■■□□□ 1.78
DDR1-250ENST00000503628 C3P01024 1663 aa26.15■■□□□ 1.78
DDR1-250ENST00000503628 SOCS7O14512 581 aa26.15■■□□□ 1.78
DDR1-250ENST00000503628 CLIP1P30622 1438 aa26.14■■□□□ 1.78
DDR1-250ENST00000503628 REREQ9P2R6 1566 aa26.14■■□□□ 1.78
DDR1-250ENST00000503628 CDC42BPBQ9Y5S2 1711 aa26.14■■□□□ 1.77
DDR1-250ENST00000503628 ABCA6Q8N139 1617 aa26.14■■□□□ 1.77
DDR1-250ENST00000503628 PTPRTO14522 1441 aa26.14■■□□□ 1.77
DDR1-250ENST00000503628 MLH3Q9UHC1 1453 aa26.12■■□□□ 1.77
DDR1-250ENST00000503628 LRRIQ1Q96JM4 1722 aa26.12■■□□□ 1.77
DDR1-250ENST00000503628 ESF1Q9H501 851 aaKnown RBP26.12■■□□□ 1.77
DDR1-250ENST00000503628 TRAPPC8Q9Y2L5 1435 aa26.09■■□□□ 1.77
DDR1-250ENST00000503628 AGLP35573 1532 aa26.08■■□□□ 1.77
DDR1-250ENST00000503628 LTBP4Q8N2S1 1624 aa26.05■■□□□ 1.76
DDR1-250ENST00000503628 ABCC1P33527 1531 aa26.04■■□□□ 1.76
DDR1-250ENST00000503628 PREX2Q70Z35 1606 aa26.03■■□□□ 1.76
DDR1-250ENST00000503628 SPATA31D1Q6ZQQ2 1576 aa26.02■■□□□ 1.76
DDR1-250ENST00000503628 ITSN2Q9NZM3 1697 aa26.02■■□□□ 1.76
DDR1-250ENST00000503628 KIDINS220Q9ULH0 1771 aa26.02■■□□□ 1.76
DDR1-250ENST00000503628 NCOA1Q15788 1441 aa26■■□□□ 1.75
DDR1-250ENST00000503628 CNTLNQ9NXG0 1405 aa25.99■■□□□ 1.75
DDR1-250ENST00000503628 IQSEC2Q5JU85 1478 aa25.96■■□□□ 1.75
DDR1-250ENST00000503628 CDC42BPAQ5VT25 1732 aa25.94■■□□□ 1.74
DDR1-250ENST00000503628 CAMSAP1Q5T5Y3 1602 aa25.94■■□□□ 1.74
DDR1-250ENST00000503628 ZNF777Q9ULD5 760 aaPredicted RBP25.92■■□□□ 1.74
DDR1-250ENST00000503628 ZMYM3Q14202 1370 aa25.92■■□□□ 1.74
DDR1-250ENST00000503628 CCDC18Q5T9S5 1454 aa25.91■■□□□ 1.74
DDR1-250ENST00000503628 NCKAP5LQ9HCH0 1330 aa25.91■■□□□ 1.74
DDR1-250ENST00000503628 NPATQ14207 1427 aa25.91■■□□□ 1.74
DDR1-250ENST00000503628 CASKIN1Q8WXD9 1431 aa25.91■■□□□ 1.74
DDR1-250ENST00000503628 SAMD9LQ8IVG5 1584 aa25.9■■□□□ 1.74
DDR1-250ENST00000503628 MROH2AA6NES4 1674 aa25.9■■□□□ 1.74
DDR1-250ENST00000503628 SUPT6HQ7KZ85 1726 aaKnown RBP25.88■■□□□ 1.73
DDR1-250ENST00000503628 SPAG9O60271 1321 aaKnown RBP25.87■■□□□ 1.73
DDR1-250ENST00000503628 ZNF335Q9H4Z2 1342 aaPredicted RBP25.87■■□□□ 1.73
DDR1-250ENST00000503628 HNRNPMP52272 730 aaKnown RBP eCLIP25.86■■□□□ 1.73
DDR1-250ENST00000503628 UBAP1LF5GYI3 381 aa25.84■■□□□ 1.73
DDR1-250ENST00000503628 SYCP2Q9BX26 1530 aa25.83■■□□□ 1.73
DDR1-250ENST00000503628 CHIC1Q5VXU3 224 aa25.82■■□□□ 1.72
DDR1-250ENST00000503628 CLTCQ00610 1675 aaKnown RBP25.82■■□□□ 1.72
DDR1-250ENST00000503628 GPATCH8Q9UKJ3 1502 aaKnown RBP25.81■■□□□ 1.72
DDR1-250ENST00000503628 PKD2Q13563 968 aa25.79■■□□□ 1.72
DDR1-250ENST00000503628 ATP7AQ04656 1500 aa25.78■■□□□ 1.72
DDR1-250ENST00000503628 MYO3AQ8NEV4 1616 aa25.77■■□□□ 1.72
DDR1-250ENST00000503628 GGT6Q6P531 493 aa25.77■■□□□ 1.72
DDR1-250ENST00000503628 PTPRKQ15262 1439 aa25.77■■□□□ 1.72
DDR1-250ENST00000503628 PLA2R1Q13018 1463 aa25.77■■□□□ 1.72
DDR1-250ENST00000503628 ZNF142P52746 1687 aaPredicted RBP25.77■■□□□ 1.72
DDR1-250ENST00000503628 A2MP01023 1474 aa25.76■■□□□ 1.71
DDR1-250ENST00000503628 FYCO1Q9BQS8 1478 aa25.76■■□□□ 1.71
DDR1-250ENST00000503628 PLXNC1O60486 1568 aa25.75■■□□□ 1.71
DDR1-250ENST00000503628 CEP170BQ9Y4F5 1589 aaPredicted RBP25.74■■□□□ 1.71
DDR1-250ENST00000503628 KIAA1107Q9UPP5 1409 aa25.74■■□□□ 1.71
DDR1-250ENST00000503628 CFDP1Q9UEE9 299 aaPredicted RBP25.74■■□□□ 1.71
DDR1-250ENST00000503628 TCOF1Q13428 1488 aaKnown RBP25.73■■□□□ 1.71
DDR1-250ENST00000503628 INO80Q9ULG1 1556 aaPredicted RBP25.73■■□□□ 1.71
DDR1-250ENST00000503628 PPP6R1Q9UPN7 881 aa25.7■■□□□ 1.7
DDR1-250ENST00000503628 PLEKHH2Q8IVE3 1493 aa25.7■■□□□ 1.7
DDR1-250ENST00000503628 CCNB3Q8WWL7 1395 aa25.68■■□□□ 1.7
DDR1-250ENST00000503628 ADGBQ8N7X0 1667 aa25.64■■□□□ 1.69
DDR1-250ENST00000503628 A2ML1A8K2U0 1454 aa25.63■■□□□ 1.69
DDR1-250ENST00000503628 DNMT1P26358 1616 aaKnown RBP25.63■■□□□ 1.69
DDR1-250ENST00000503628 ZNF644Q9H582 1327 aaPredicted RBP25.63■■□□□ 1.69
DDR1-250ENST00000503628 SCAF1Q9H7N4 1312 aaKnown RBP25.61■■□□□ 1.69
DDR1-250ENST00000503628 HSPA1LP34931 641 aa25.6■■□□□ 1.69
DDR1-250ENST00000503628 MTUS2Q5JR59 1369 aa25.59■■□□□ 1.69
DDR1-250ENST00000503628 PIP4K2BP78356 416 aa25.59■■□□□ 1.69
DDR1-250ENST00000503628 FBXO31Q5XUX0 539 aaPredicted RBP25.57■■□□□ 1.68
DDR1-250ENST00000503628 MBD5Q9P267 1494 aa25.55■■□□□ 1.68
DDR1-250ENST00000503628 TOM1O60784 492 aa25.55■■□□□ 1.68
DDR1-250ENST00000503628 DHX29Q7Z478 1369 aaKnown RBP25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms