RNA–Protein interactions for RNA: ENST00000502479.1

LINC00939-201, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best) BASIC

Gene LINC00939, Length 4,972 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-201ENST00000502479 PLEKHD1A6NEE1 506 aa8.95□□□□□ -0.98
LINC00939-201ENST00000502479 NUP160Q12769 1436 aa8.95□□□□□ -0.98
LINC00939-201ENST00000502479 EIF4G2P78344 907 aaKnown RBP eCLIP8.95□□□□□ -0.98
LINC00939-201ENST00000502479 ARID4BQ4LE39 1312 aaPredicted RBP8.94□□□□□ -0.98
LINC00939-201ENST00000502479 ARHGEF5Q12774 1597 aa8.93□□□□□ -0.98
LINC00939-201ENST00000502479 NUP153P49790 1475 aaKnown RBP8.93□□□□□ -0.98
LINC00939-201ENST00000502479 MAGI3Q5TCQ9 1506 aa8.93□□□□□ -0.98
LINC00939-201ENST00000502479 CFDP1Q9UEE9 299 aaPredicted RBP8.93□□□□□ -0.98
LINC00939-201ENST00000502479 MPHOSPH9Q99550 1183 aa8.92□□□□□ -0.98
LINC00939-201ENST00000502479 ABCA8O94911 1581 aa8.91□□□□□ -0.98
LINC00939-201ENST00000502479 ROCK2O75116 1388 aaKnown RBP8.91□□□□□ -0.98
LINC00939-201ENST00000502479 SIN3AQ96ST3 1273 aa8.91□□□□□ -0.98
LINC00939-201ENST00000502479 DNAJC5BQ9UF47 199 aa8.91□□□□□ -0.98
LINC00939-201ENST00000502479 POLR1AO95602 1720 aaPredicted RBP8.9□□□□□ -0.98
LINC00939-201ENST00000502479 ZNF608Q9ULD9 1512 aaPredicted RBP8.9□□□□□ -0.98
LINC00939-201ENST00000502479 RRP7BPQ9NSQ0 103 aa8.9□□□□□ -0.98
LINC00939-201ENST00000502479 ABCC5O15440 1437 aa8.9□□□□□ -0.98
LINC00939-201ENST00000502479 KDM5DQ9BY66 1539 aa8.89□□□□□ -0.99
LINC00939-201ENST00000502479 TSPY4P0CV99 314 aa8.89□□□□□ -0.99
LINC00939-201ENST00000502479 TSPY10P0CW01 314 aa8.89□□□□□ -0.99
LINC00939-201ENST00000502479 ERICH6BQ5W0A0 696 aa8.89□□□□□ -0.99
LINC00939-201ENST00000502479 DDX10Q13206 875 aaKnown RBP8.88□□□□□ -0.99
LINC00939-201ENST00000502479 SLC4A1APQ9BWU0 796 aaKnown RBP8.88□□□□□ -0.99
LINC00939-201ENST00000502479 RPRD2Q5VT52 1461 aaKnown RBP8.88□□□□□ -0.99
LINC00939-201ENST00000502479 CNTLNQ9NXG0 1405 aa8.88□□□□□ -0.99
LINC00939-201ENST00000502479 PTPRKQ15262 1439 aa8.88□□□□□ -0.99
LINC00939-201ENST00000502479 KIAA1107Q9UPP5 1409 aa8.88□□□□□ -0.99
LINC00939-201ENST00000502479 CHIC2Q9UKJ5 165 aa8.87□□□□□ -0.99
LINC00939-201ENST00000502479 MAST1Q9Y2H9 1570 aa8.87□□□□□ -0.99
LINC00939-201ENST00000502479 FBLN2P98095 1184 aa8.87□□□□□ -0.99
LINC00939-201ENST00000502479 ARHGEF12Q9NZN5 1544 aa8.87□□□□□ -0.99
LINC00939-201ENST00000502479 KTN1Q86UP2 1357 aaKnown RBP8.86□□□□□ -0.99
LINC00939-201ENST00000502479 PREX2Q70Z35 1606 aa8.86□□□□□ -0.99
LINC00939-201ENST00000502479 GPATCH8Q9UKJ3 1502 aaKnown RBP8.86□□□□□ -0.99
LINC00939-201ENST00000502479 EIF2AK4Q9P2K8 1649 aaKnown RBP8.85□□□□□ -0.99
LINC00939-201ENST00000502479 JPH4Q96JJ6 628 aa8.85□□□□□ -0.99
LINC00939-201ENST00000502479 CCDC141Q6ZP82 1450 aa8.85□□□□□ -0.99
LINC00939-201ENST00000502479 PTPRGP23470 1445 aa8.85□□□□□ -0.99
LINC00939-201ENST00000502479 C9orf84Q5VXU9 1444 aa8.84□□□□□ -0.99
LINC00939-201ENST00000502479 TEX14Q8IWB6 1497 aa8.84□□□□□ -0.99
LINC00939-201ENST00000502479 HSPA5P11021 654 aaKnown RBP8.83□□□□□ -1
LINC00939-201ENST00000502479 ANKRD30BQ9BXX2 1392 aa8.83□□□□□ -1
LINC00939-201ENST00000502479 ZNF777Q9ULD5 760 aaPredicted RBP8.83□□□□□ -1
LINC00939-201ENST00000502479 PRG4Q92954 1404 aaPredicted RBP8.83□□□□□ -1
LINC00939-201ENST00000502479 ANKRD50Q9ULJ7 1429 aa8.83□□□□□ -1
LINC00939-201ENST00000502479 SHROOM2Q13796 1616 aa8.83□□□□□ -1
LINC00939-201ENST00000502479 CDC42BPAQ5VT25 1732 aa8.82□□□□□ -1
LINC00939-201ENST00000502479 MYO5CQ9NQX4 1742 aa8.82□□□□□ -1
LINC00939-201ENST00000502479 PLXNC1O60486 1568 aa8.81□□□□□ -1
LINC00939-201ENST00000502479 SUPT16HQ9Y5B9 1047 aaKnown RBP8.81□□□□□ -1
LINC00939-201ENST00000502479 ARHGAP5Q13017 1502 aa8.81□□□□□ -1
LINC00939-201ENST00000502479 ABCC10Q5T3U5 1492 aa8.81□□□□□ -1
LINC00939-201ENST00000502479 NCOA1Q15788 1441 aa8.81□□□□□ -1
LINC00939-201ENST00000502479 SLC24A1O60721 1099 aa8.81□□□□□ -1
LINC00939-201ENST00000502479 ABCC2Q92887 1545 aa8.8□□□□□ -1
LINC00939-201ENST00000502479 DUOX2Q9NRD8 1548 aa8.8□□□□□ -1
LINC00939-201ENST00000502479 PLB1Q6P1J6 1458 aa8.8□□□□□ -1
LINC00939-201ENST00000502479 STAC3Q96MF2 364 aa8.8□□□□□ -1
LINC00939-201ENST00000502479 ERBINQ96RT1 1412 aa8.8□□□□□ -1
LINC00939-201ENST00000502479 UHRF1BP1LA0JNW5 1464 aa8.8□□□□□ -1
LINC00939-201ENST00000502479 RALGAPBQ86X10 1494 aa8.8□□□□□ -1
LINC00939-201ENST00000502479 CHD1O14646 1710 aa8.8□□□□□ -1
LINC00939-201ENST00000502479 UHRF1BP1Q6BDS2 1440 aa8.79□□□□□ -1
LINC00939-201ENST00000502479 CCDC7Q96M83 1385 aa8.79□□□□□ -1
LINC00939-201ENST00000502479 UNC13BO14795 1591 aa8.79□□□□□ -1
LINC00939-201ENST00000502479 CFAP74Q9C0B2 1584 aa8.78□□□□□ -1
LINC00939-201ENST00000502479 LAMC1P11047 1609 aa8.78□□□□□ -1
LINC00939-201ENST00000502479 ATP10BO94823 1461 aa8.78□□□□□ -1
LINC00939-201ENST00000502479 PZPP20742 1482 aa8.78□□□□□ -1
LINC00939-201ENST00000502479 ARAP3Q8WWN8 1544 aa8.78□□□□□ -1
LINC00939-201ENST00000502479 KANK1Q14678 1352 aa8.78□□□□□ -1
LINC00939-201ENST00000502479 NUP155O75694 1391 aa8.77□□□□□ -1.01
LINC00939-201ENST00000502479 KDM6BO15054 1643 aa8.77□□□□□ -1.01
LINC00939-201ENST00000502479 ARID3CA6NKF2 412 aa8.77□□□□□ -1.01
LINC00939-201ENST00000502479 MBD5Q9P267 1494 aa8.77□□□□□ -1.01
LINC00939-201ENST00000502479 L3MBTL2Q969R5 705 aa8.76□□□□□ -1.01
LINC00939-201ENST00000502479 KIF15Q9NS87 1388 aa8.76□□□□□ -1.01
LINC00939-201ENST00000502479 KDM5BQ9UGL1 1544 aa8.76□□□□□ -1.01
LINC00939-201ENST00000502479 CCDC144AA2RUR9 1427 aa8.75□□□□□ -1.01
LINC00939-201ENST00000502479 RALBP1Q15311 655 aa8.75□□□□□ -1.01
LINC00939-201ENST00000502479 PKD2Q13563 968 aa8.75□□□□□ -1.01
LINC00939-201ENST00000502479 IQGAP3Q86VI3 1631 aa8.75□□□□□ -1.01
LINC00939-201ENST00000502479 CDCA8Q53HL2 280 aa8.75□□□□□ -1.01
LINC00939-201ENST00000502479 SAMD9LQ8IVG5 1584 aa8.75□□□□□ -1.01
LINC00939-201ENST00000502479 FAM135AQ9P2D6 1515 aa8.74□□□□□ -1.01
LINC00939-201ENST00000502479 FKBP8Q14318 412 aa8.74□□□□□ -1.01
LINC00939-201ENST00000502479 KDM5CP41229 1560 aa8.74□□□□□ -1.01
LINC00939-201ENST00000502479 EIF3AQ14152 1382 aaKnown RBP8.74□□□□□ -1.01
LINC00939-201ENST00000502479 USP47Q96K76 1375 aa8.74□□□□□ -1.01
LINC00939-201ENST00000502479 HNRNPUQ00839 825 aaKnown RBP eCLIP8.73□□□□□ -1.01
LINC00939-201ENST00000502479 RTEL1-TNFRSF6BF6WH68 1400 aa8.73□□□□□ -1.01
LINC00939-201ENST00000502479 WDR7Q9Y4E6 1490 aa8.73□□□□□ -1.01
LINC00939-201ENST00000502479 EFCAB2Q5VUJ9 269 aa8.72□□□□□ -1.01
LINC00939-201ENST00000502479 CARD11Q9BXL7 1154 aa8.72□□□□□ -1.01
LINC00939-201ENST00000502479 ZBED9Q6R2W3 1325 aa8.72□□□□□ -1.01
LINC00939-201ENST00000502479 MRS2Q9HD23 443 aa8.72□□□□□ -1.01
LINC00939-201ENST00000502479 ZCCHC11Q5TAX3 1644 aaKnown RBP8.71□□□□□ -1.01
LINC00939-201ENST00000502479 CDC42BPBQ9Y5S2 1711 aa8.71□□□□□ -1.02
LINC00939-201ENST00000502479 WASHC2AQ641Q2 1341 aa8.71□□□□□ -1.02
LINC00939-201ENST00000502479 SYCP2Q9BX26 1530 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms