RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 SCAPERQ9BY12 1400 aa20.09■□□□□ 0.81
THBS3-209ENST00000498500 CHIC1Q5VXU3 224 aa20.08■□□□□ 0.81
THBS3-209ENST00000498500 CDK13Q14004 1512 aaKnown RBP20.07■□□□□ 0.8
THBS3-209ENST00000498500 PREX1Q8TCU6 1659 aa20.06■□□□□ 0.8
THBS3-209ENST00000498500 PLCH2O75038 1416 aa20.05■□□□□ 0.8
THBS3-209ENST00000498500 MYO5CQ9NQX4 1742 aa20.05■□□□□ 0.8
THBS3-209ENST00000498500 ATP10AO60312 1499 aa20.04■□□□□ 0.8
THBS3-209ENST00000498500 ATP1B4Q9UN42 357 aaPredicted RBP20.03■□□□□ 0.8
THBS3-209ENST00000498500 ARHGEF12Q9NZN5 1544 aa20.02■□□□□ 0.8
THBS3-209ENST00000498500 C9orf84Q5VXU9 1444 aa20.02■□□□□ 0.79
THBS3-209ENST00000498500 EFCAB2Q5VUJ9 269 aa20.01■□□□□ 0.79
THBS3-209ENST00000498500 CEBPAP49715 358 aaPredicted RBP20■□□□□ 0.79
THBS3-209ENST00000498500 SETD1BQ9UPS6 1966 aaKnown RBP19.99■□□□□ 0.79
THBS3-209ENST00000498500 MYT1LQ9UL68 1186 aa19.97■□□□□ 0.79
THBS3-209ENST00000498500 STRCQ7RTU9 1775 aa19.97■□□□□ 0.79
THBS3-209ENST00000498500 CDK11AQ9UQ88 783 aaPredicted RBP19.96■□□□□ 0.79
THBS3-209ENST00000498500 DMRT2Q9Y5R5 561 aa19.96■□□□□ 0.79
THBS3-209ENST00000498500 ZNF518AQ6AHZ1 1483 aa19.94■□□□□ 0.78
THBS3-209ENST00000498500 KIF14Q15058 1648 aa19.94■□□□□ 0.78
THBS3-209ENST00000498500 EHMT2Q96KQ7 1210 aa19.93■□□□□ 0.78
THBS3-209ENST00000498500 DISP3Q9P2K9 1392 aa19.93■□□□□ 0.78
THBS3-209ENST00000498500 FMN1Q68DA7 1419 aa19.93■□□□□ 0.78
THBS3-209ENST00000498500 UHRF1BP1Q6BDS2 1440 aa19.93■□□□□ 0.78
THBS3-209ENST00000498500 ARHGAP5Q13017 1502 aa19.92■□□□□ 0.78
THBS3-209ENST00000498500 AFAP1Q8N556 730 aa19.92■□□□□ 0.78
THBS3-209ENST00000498500 UBTFP17480 764 aaKnown RBP19.91■□□□□ 0.78
THBS3-209ENST00000498500 KDM5CP41229 1560 aa19.9■□□□□ 0.78
THBS3-209ENST00000498500 C3P01024 1663 aa19.87■□□□□ 0.77
THBS3-209ENST00000498500 DIP2CQ9Y2E4 1556 aa19.87■□□□□ 0.77
THBS3-209ENST00000498500 CLIP1P30622 1438 aa19.86■□□□□ 0.77
THBS3-209ENST00000498500 TROQ12816 1431 aaPredicted RBP19.86■□□□□ 0.77
THBS3-209ENST00000498500 CDC42BPBQ9Y5S2 1711 aa19.86■□□□□ 0.77
THBS3-209ENST00000498500 ILDR2Q71H61 639 aa19.86■□□□□ 0.77
THBS3-209ENST00000498500 ESF1Q9H501 851 aaKnown RBP19.86■□□□□ 0.77
THBS3-209ENST00000498500 ARHGAP35Q9NRY4 1499 aa19.85■□□□□ 0.77
THBS3-209ENST00000498500 LRRIQ1Q96JM4 1722 aa19.85■□□□□ 0.77
THBS3-209ENST00000498500 ABCA6Q8N139 1617 aa19.84■□□□□ 0.77
THBS3-209ENST00000498500 REREQ9P2R6 1566 aa19.84■□□□□ 0.77
THBS3-209ENST00000498500 SOCS7O14512 581 aa19.82■□□□□ 0.76
THBS3-209ENST00000498500 PTPRTO14522 1441 aa19.82■□□□□ 0.76
THBS3-209ENST00000498500 MLH3Q9UHC1 1453 aa19.8■□□□□ 0.76
THBS3-209ENST00000498500 ITSN2Q9NZM3 1697 aa19.78■□□□□ 0.76
THBS3-209ENST00000498500 PREX2Q70Z35 1606 aa19.78■□□□□ 0.76
THBS3-209ENST00000498500 SPATA31D1Q6ZQQ2 1576 aa19.78■□□□□ 0.76
THBS3-209ENST00000498500 TRAPPC8Q9Y2L5 1435 aa19.77■□□□□ 0.76
THBS3-209ENST00000498500 AGLP35573 1532 aa19.77■□□□□ 0.76
THBS3-209ENST00000498500 ABCC1P33527 1531 aa19.76■□□□□ 0.75
THBS3-209ENST00000498500 KIDINS220Q9ULH0 1771 aa19.75■□□□□ 0.75
THBS3-209ENST00000498500 LTBP4Q8N2S1 1624 aa19.74■□□□□ 0.75
THBS3-209ENST00000498500 CNTLNQ9NXG0 1405 aa19.73■□□□□ 0.75
THBS3-209ENST00000498500 CDC42BPAQ5VT25 1732 aa19.73■□□□□ 0.75
THBS3-209ENST00000498500 NCOA1Q15788 1441 aa19.71■□□□□ 0.75
THBS3-209ENST00000498500 IQSEC2Q5JU85 1478 aa19.7■□□□□ 0.74
THBS3-209ENST00000498500 CAMSAP1Q5T5Y3 1602 aa19.69■□□□□ 0.74
THBS3-209ENST00000498500 MROH2AA6NES4 1674 aa19.69■□□□□ 0.74
THBS3-209ENST00000498500 CCDC18Q5T9S5 1454 aa19.69■□□□□ 0.74
THBS3-209ENST00000498500 SUPT6HQ7KZ85 1726 aaKnown RBP19.68■□□□□ 0.74
THBS3-209ENST00000498500 ZNF777Q9ULD5 760 aaPredicted RBP19.67■□□□□ 0.74
THBS3-209ENST00000498500 SAMD9LQ8IVG5 1584 aa19.66■□□□□ 0.74
THBS3-209ENST00000498500 NPATQ14207 1427 aa19.65■□□□□ 0.74
THBS3-209ENST00000498500 CASKIN1Q8WXD9 1431 aa19.65■□□□□ 0.74
THBS3-209ENST00000498500 ZMYM3Q14202 1370 aa19.64■□□□□ 0.73
THBS3-209ENST00000498500 CLTCQ00610 1675 aaKnown RBP19.63■□□□□ 0.73
THBS3-209ENST00000498500 NCKAP5LQ9HCH0 1330 aa19.63■□□□□ 0.73
THBS3-209ENST00000498500 SPAG9O60271 1321 aaKnown RBP19.62■□□□□ 0.73
THBS3-209ENST00000498500 SYCP2Q9BX26 1530 aa19.61■□□□□ 0.73
THBS3-209ENST00000498500 ZNF335Q9H4Z2 1342 aaPredicted RBP19.6■□□□□ 0.73
THBS3-209ENST00000498500 UBAP1LF5GYI3 381 aa19.6■□□□□ 0.73
THBS3-209ENST00000498500 HNRNPMP52272 730 aaKnown RBP eCLIP19.6■□□□□ 0.73
THBS3-209ENST00000498500 ZNF142P52746 1687 aaPredicted RBP19.59■□□□□ 0.73
THBS3-209ENST00000498500 MYO3AQ8NEV4 1616 aa19.58■□□□□ 0.73
THBS3-209ENST00000498500 ATP7AQ04656 1500 aa19.57■□□□□ 0.72
THBS3-209ENST00000498500 PKD2Q13563 968 aa19.56■□□□□ 0.72
THBS3-209ENST00000498500 GPATCH8Q9UKJ3 1502 aaKnown RBP19.56■□□□□ 0.72
THBS3-209ENST00000498500 FYCO1Q9BQS8 1478 aa19.55■□□□□ 0.72
THBS3-209ENST00000498500 GGT6Q6P531 493 aa19.55■□□□□ 0.72
THBS3-209ENST00000498500 CEP170BQ9Y4F5 1589 aaPredicted RBP19.55■□□□□ 0.72
THBS3-209ENST00000498500 A2MP01023 1474 aa19.54■□□□□ 0.72
THBS3-209ENST00000498500 PLA2R1Q13018 1463 aa19.54■□□□□ 0.72
THBS3-209ENST00000498500 PLXNC1O60486 1568 aa19.53■□□□□ 0.72
THBS3-209ENST00000498500 INO80Q9ULG1 1556 aaPredicted RBP19.53■□□□□ 0.72
THBS3-209ENST00000498500 CFDP1Q9UEE9 299 aaPredicted RBP19.53■□□□□ 0.72
THBS3-209ENST00000498500 PTPRKQ15262 1439 aa19.52■□□□□ 0.72
THBS3-209ENST00000498500 PLEKHH2Q8IVE3 1493 aa19.52■□□□□ 0.72
THBS3-209ENST00000498500 KIAA1107Q9UPP5 1409 aa19.51■□□□□ 0.71
THBS3-209ENST00000498500 ADGBQ8N7X0 1667 aa19.5■□□□□ 0.71
THBS3-209ENST00000498500 TCOF1Q13428 1488 aaKnown RBP19.5■□□□□ 0.71
THBS3-209ENST00000498500 PPP6R1Q9UPN7 881 aa19.5■□□□□ 0.71
THBS3-209ENST00000498500 CCNB3Q8WWL7 1395 aa19.49■□□□□ 0.71
THBS3-209ENST00000498500 SCAF1Q9H7N4 1312 aaKnown RBP19.46■□□□□ 0.71
THBS3-209ENST00000498500 DNMT1P26358 1616 aaKnown RBP19.45■□□□□ 0.7
THBS3-209ENST00000498500 POLR1AO95602 1720 aaPredicted RBP19.45■□□□□ 0.7
THBS3-209ENST00000498500 A2ML1A8K2U0 1454 aa19.44■□□□□ 0.7
THBS3-209ENST00000498500 MTUS2Q5JR59 1369 aa19.44■□□□□ 0.7
THBS3-209ENST00000498500 PIP4K2BP78356 416 aa19.42■□□□□ 0.7
THBS3-209ENST00000498500 HSPA1LP34931 641 aa19.4■□□□□ 0.7
THBS3-209ENST00000498500 ZNF644Q9H582 1327 aaPredicted RBP19.4■□□□□ 0.7
THBS3-209ENST00000498500 TOM1O60784 492 aa19.39■□□□□ 0.69
THBS3-209ENST00000498500 CPS1P31327 1500 aa19.38■□□□□ 0.69
THBS3-209ENST00000498500 TIAM1Q13009 1591 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms