RNA–Protein interactions for RNA: ENST00000498251.2

CACNA1D-207, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-207ENST00000498251 FER1L4A9Z1Z3 1794 aa17.47■□□□□ 0.39
CACNA1D-207ENST00000498251 HECW1Q76N89 1606 aa17.44■□□□□ 0.38
CACNA1D-207ENST00000498251 SOCS7O14512 581 aa17.44■□□□□ 0.38
CACNA1D-207ENST00000498251 CSRNP3Q8WYN3 585 aa17.44■□□□□ 0.38
CACNA1D-207ENST00000498251 ATP1B4Q9UN42 357 aaPredicted RBP17.43■□□□□ 0.38
CACNA1D-207ENST00000498251 EFCAB5A4FU69 1503 aa17.42■□□□□ 0.38
CACNA1D-207ENST00000498251 CDK13Q14004 1512 aaKnown RBP17.42■□□□□ 0.38
CACNA1D-207ENST00000498251 SCAPERQ9BY12 1400 aa17.42■□□□□ 0.38
CACNA1D-207ENST00000498251 ZMYM4Q5VZL5 1548 aa17.41■□□□□ 0.38
CACNA1D-207ENST00000498251 CFAP74Q9C0B2 1584 aa17.4■□□□□ 0.38
CACNA1D-207ENST00000498251 MYT1LQ9UL68 1186 aa17.4■□□□□ 0.38
CACNA1D-207ENST00000498251 STRCQ7RTU9 1775 aa17.36■□□□□ 0.37
CACNA1D-207ENST00000498251 PREX1Q8TCU6 1659 aa17.36■□□□□ 0.37
CACNA1D-207ENST00000498251 ATP10AO60312 1499 aa17.35■□□□□ 0.37
CACNA1D-207ENST00000498251 ARHGEF12Q9NZN5 1544 aa17.35■□□□□ 0.37
CACNA1D-207ENST00000498251 SPATA31D1Q6ZQQ2 1576 aa17.34■□□□□ 0.37
CACNA1D-207ENST00000498251 MAGI2Q86UL8 1455 aa17.34■□□□□ 0.37
CACNA1D-207ENST00000498251 C9orf84Q5VXU9 1444 aa17.33■□□□□ 0.36
CACNA1D-207ENST00000498251 AFAP1Q8N556 730 aa17.33■□□□□ 0.36
CACNA1D-207ENST00000498251 PLCH2O75038 1416 aa17.31■□□□□ 0.36
CACNA1D-207ENST00000498251 UHRF1BP1Q6BDS2 1440 aa17.31■□□□□ 0.36
CACNA1D-207ENST00000498251 DMRT2Q9Y5R5 561 aa17.3■□□□□ 0.36
CACNA1D-207ENST00000498251 EFCAB2Q5VUJ9 269 aa17.28■□□□□ 0.36
CACNA1D-207ENST00000498251 KIF14Q15058 1648 aa17.25■□□□□ 0.35
CACNA1D-207ENST00000498251 ARHGAP5Q13017 1502 aa17.24■□□□□ 0.35
CACNA1D-207ENST00000498251 MYO5CQ9NQX4 1742 aa17.24■□□□□ 0.35
CACNA1D-207ENST00000498251 ESF1Q9H501 851 aaKnown RBP17.23■□□□□ 0.35
CACNA1D-207ENST00000498251 C3P01024 1663 aa17.21■□□□□ 0.35
CACNA1D-207ENST00000498251 DIP2CQ9Y2E4 1556 aa17.21■□□□□ 0.35
CACNA1D-207ENST00000498251 ZNF518AQ6AHZ1 1483 aa17.2■□□□□ 0.34
CACNA1D-207ENST00000498251 LTBP4Q8N2S1 1624 aa17.2■□□□□ 0.34
CACNA1D-207ENST00000498251 PTPRTO14522 1441 aa17.2■□□□□ 0.34
CACNA1D-207ENST00000498251 NCKAP5LQ9HCH0 1330 aa17.19■□□□□ 0.34
CACNA1D-207ENST00000498251 ABCA6Q8N139 1617 aa17.18■□□□□ 0.34
CACNA1D-207ENST00000498251 UBTFP17480 764 aaKnown RBP17.18■□□□□ 0.34
CACNA1D-207ENST00000498251 UBAP1LF5GYI3 381 aa17.17■□□□□ 0.34
CACNA1D-207ENST00000498251 ZNF335Q9H4Z2 1342 aaPredicted RBP17.17■□□□□ 0.34
CACNA1D-207ENST00000498251 TRAPPC8Q9Y2L5 1435 aa17.16■□□□□ 0.34
CACNA1D-207ENST00000498251 SETD1BQ9UPS6 1966 aaKnown RBP17.16■□□□□ 0.34
CACNA1D-207ENST00000498251 KDM5CP41229 1560 aa17.15■□□□□ 0.34
CACNA1D-207ENST00000498251 NCOA1Q15788 1441 aa17.14■□□□□ 0.33
CACNA1D-207ENST00000498251 CDK11AQ9UQ88 783 aaPredicted RBP17.14■□□□□ 0.33
CACNA1D-207ENST00000498251 SCAF1Q9H7N4 1312 aaKnown RBP17.13■□□□□ 0.33
CACNA1D-207ENST00000498251 CAMSAP1Q5T5Y3 1602 aa17.13■□□□□ 0.33
CACNA1D-207ENST00000498251 TROQ12816 1431 aaPredicted RBP17.13■□□□□ 0.33
CACNA1D-207ENST00000498251 EEA1Q15075 1411 aa17.12■□□□□ 0.33
CACNA1D-207ENST00000498251 ZNF777Q9ULD5 760 aaPredicted RBP17.11■□□□□ 0.33
CACNA1D-207ENST00000498251 CLIP1P30622 1438 aa17.1■□□□□ 0.33
CACNA1D-207ENST00000498251 ARHGAP35Q9NRY4 1499 aa17.1■□□□□ 0.33
CACNA1D-207ENST00000498251 CDC42BPBQ9Y5S2 1711 aa17.1■□□□□ 0.33
CACNA1D-207ENST00000498251 FMN1Q68DA7 1419 aa17.09■□□□□ 0.33
CACNA1D-207ENST00000498251 LRRIQ1Q96JM4 1722 aa17.09■□□□□ 0.33
CACNA1D-207ENST00000498251 MLH3Q9UHC1 1453 aa17.07■□□□□ 0.32
CACNA1D-207ENST00000498251 PIP4K2BP78356 416 aa17.07■□□□□ 0.32
CACNA1D-207ENST00000498251 REREQ9P2R6 1566 aa17.06■□□□□ 0.32
CACNA1D-207ENST00000498251 ABCC1P33527 1531 aa17.06■□□□□ 0.32
CACNA1D-207ENST00000498251 ITSN2Q9NZM3 1697 aa17.05■□□□□ 0.32
CACNA1D-207ENST00000498251 AGLP35573 1532 aa17.05■□□□□ 0.32
CACNA1D-207ENST00000498251 KIDINS220Q9ULH0 1771 aa17.05■□□□□ 0.32
CACNA1D-207ENST00000498251 ZMYM3Q14202 1370 aa17.04■□□□□ 0.32
CACNA1D-207ENST00000498251 SUPT6HQ7KZ85 1726 aaKnown RBP17.03■□□□□ 0.32
CACNA1D-207ENST00000498251 IQSEC2Q5JU85 1478 aa17.03■□□□□ 0.32
CACNA1D-207ENST00000498251 PREX2Q70Z35 1606 aa17.03■□□□□ 0.32
CACNA1D-207ENST00000498251 HSPA1LP34931 641 aa17.02■□□□□ 0.32
CACNA1D-207ENST00000498251 HNRNPMP52272 730 aaKnown RBP eCLIP17.02■□□□□ 0.32
CACNA1D-207ENST00000498251 CNTLNQ9NXG0 1405 aa17.02■□□□□ 0.31
CACNA1D-207ENST00000498251 GGT6Q6P531 493 aa17.01■□□□□ 0.31
CACNA1D-207ENST00000498251 CLTCQ00610 1675 aaKnown RBP17■□□□□ 0.31
CACNA1D-207ENST00000498251 SPAG9O60271 1321 aaKnown RBP16.98■□□□□ 0.31
CACNA1D-207ENST00000498251 SAMD9LQ8IVG5 1584 aa16.98■□□□□ 0.31
CACNA1D-207ENST00000498251 PPP6R1Q9UPN7 881 aa16.98■□□□□ 0.31
CACNA1D-207ENST00000498251 NPATQ14207 1427 aa16.97■□□□□ 0.31
CACNA1D-207ENST00000498251 SYCP2Q9BX26 1530 aa16.97■□□□□ 0.31
CACNA1D-207ENST00000498251 MYO3AQ8NEV4 1616 aa16.97■□□□□ 0.31
CACNA1D-207ENST00000498251 CDC42BPAQ5VT25 1732 aa16.96■□□□□ 0.31
CACNA1D-207ENST00000498251 MED1Q15648 1581 aaPredicted RBP16.96■□□□□ 0.31
CACNA1D-207ENST00000498251 CEP170BQ9Y4F5 1589 aaPredicted RBP16.94■□□□□ 0.3
CACNA1D-207ENST00000498251 PKD2Q13563 968 aa16.94■□□□□ 0.3
CACNA1D-207ENST00000498251 PTPRKQ15262 1439 aa16.94■□□□□ 0.3
CACNA1D-207ENST00000498251 MROH2AA6NES4 1674 aa16.94■□□□□ 0.3
CACNA1D-207ENST00000498251 MSH5O43196 834 aa16.93■□□□□ 0.3
CACNA1D-207ENST00000498251 TCOF1Q13428 1488 aaKnown RBP16.92■□□□□ 0.3
CACNA1D-207ENST00000498251 ATP7AQ04656 1500 aa16.91■□□□□ 0.3
CACNA1D-207ENST00000498251 FBXO31Q5XUX0 539 aaPredicted RBP16.9■□□□□ 0.3
CACNA1D-207ENST00000498251 A2MP01023 1474 aa16.9■□□□□ 0.3
CACNA1D-207ENST00000498251 ZNF142P52746 1687 aaPredicted RBP16.9■□□□□ 0.3
CACNA1D-207ENST00000498251 PLA2R1Q13018 1463 aa16.89■□□□□ 0.29
CACNA1D-207ENST00000498251 CASKIN1Q8WXD9 1431 aa16.88■□□□□ 0.29
CACNA1D-207ENST00000498251 CCDC18Q5T9S5 1454 aa16.87■□□□□ 0.29
CACNA1D-207ENST00000498251 GPATCH8Q9UKJ3 1502 aaKnown RBP16.87■□□□□ 0.29
CACNA1D-207ENST00000498251 TOM1O60784 492 aa16.87■□□□□ 0.29
CACNA1D-207ENST00000498251 CFDP1Q9UEE9 299 aaPredicted RBP16.87■□□□□ 0.29
CACNA1D-207ENST00000498251 ZNF644Q9H582 1327 aaPredicted RBP16.87■□□□□ 0.29
CACNA1D-207ENST00000498251 PLXNC1O60486 1568 aa16.85■□□□□ 0.29
CACNA1D-207ENST00000498251 DNMT1P26358 1616 aaKnown RBP16.85■□□□□ 0.29
CACNA1D-207ENST00000498251 PIAS4Q8N2W9 510 aaPredicted RBP16.84■□□□□ 0.29
CACNA1D-207ENST00000498251 A2ML1A8K2U0 1454 aa16.84■□□□□ 0.29
CACNA1D-207ENST00000498251 INO80Q9ULG1 1556 aaPredicted RBP16.84■□□□□ 0.29
CACNA1D-207ENST00000498251 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.83■□□□□ 0.28
CACNA1D-207ENST00000498251 SHANK2Q9UPX8 1470 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms