RNA–Protein interactions for RNA: ENST00000498135.5

TMEM50A-206, Transcript of transmembrane protein 50A, human

TSL 3

Gene TMEM50A, Length 776 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM50A-206	ENST00000498135	HECW1	Q76N89	1606 aa		33.72	■■■□□ 2.99
TMEM50A-206	ENST00000498135	NUP153	P49790	1475 aa	Known RBP	33.72	■■■□□ 2.99
TMEM50A-206	ENST00000498135	UHRF1BP1	Q6BDS2	1440 aa		33.7	■■■□□ 2.99
TMEM50A-206	ENST00000498135	SAMD9	Q5K651	1589 aa		33.7	■■■□□ 2.99
TMEM50A-206	ENST00000498135	CEBPA	P49715	358 aa	Predicted RBP	33.69	■■■□□ 2.98
TMEM50A-206	ENST00000498135	PLEKHD1	A6NEE1	506 aa		33.68	■■■□□ 2.98
TMEM50A-206	ENST00000498135	PTPRT	O14522	1441 aa		33.66	■■■□□ 2.98
TMEM50A-206	ENST00000498135	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	33.66	■■■□□ 2.98	9e-19	■□□□□ 9.5
TMEM50A-206	ENST00000498135	ATP10A	O60312	1499 aa		33.62	■■■□□ 2.97
TMEM50A-206	ENST00000498135	IQSEC2	Q5JU85	1478 aa		33.62	■■■□□ 2.97
TMEM50A-206	ENST00000498135	C9orf84	Q5VXU9	1444 aa		33.62	■■■□□ 2.97
TMEM50A-206	ENST00000498135	LTBP4	Q8N2S1	1624 aa		33.59	■■■□□ 2.97
TMEM50A-206	ENST00000498135	SCAPER	Q9BY12	1400 aa		33.58	■■■□□ 2.97
TMEM50A-206	ENST00000498135	SETD1B	Q9UPS6	1966 aa	Known RBP	33.56	■■■□□ 2.96
TMEM50A-206	ENST00000498135	PLCH2	O75038	1416 aa		33.44	■■■□□ 2.94
TMEM50A-206	ENST00000498135	NCOA1	Q15788	1441 aa		33.37	■■■□□ 2.93
TMEM50A-206	ENST00000498135	C3	P01024	1663 aa		33.37	■■■□□ 2.93
TMEM50A-206	ENST00000498135	RANGAP1	P46060	587 aa	Predicted RBP	33.37	■■■□□ 2.93
TMEM50A-206	ENST00000498135	UBAP1L	F5GYI3	381 aa		33.36	■■■□□ 2.93
TMEM50A-206	ENST00000498135	ZNF518A	Q6AHZ1	1483 aa		33.32	■■■□□ 2.92
TMEM50A-206	ENST00000498135	EFCAB2	Q5VUJ9	269 aa		33.32	■■■□□ 2.92
TMEM50A-206	ENST00000498135	TRAPPC8	Q9Y2L5	1435 aa		33.32	■■■□□ 2.92
TMEM50A-206	ENST00000498135	ESF1	Q9H501	851 aa	Known RBP	33.3	■■■□□ 2.92
TMEM50A-206	ENST00000498135	MYT1L	Q9UL68	1186 aa		33.29	■■■□□ 2.92
TMEM50A-206	ENST00000498135	CDK13	Q14004	1512 aa	Known RBP	33.28	■■■□□ 2.92
TMEM50A-206	ENST00000498135	MYO5C	Q9NQX4	1742 aa		33.27	■■■□□ 2.92
TMEM50A-206	ENST00000498135	KDM5C	P41229	1560 aa		33.26	■■■□□ 2.91
TMEM50A-206	ENST00000498135	RERE	Q9P2R6	1566 aa		33.26	■■■□□ 2.91
TMEM50A-206	ENST00000498135	DIP2C	Q9Y2E4	1556 aa		33.26	■■■□□ 2.91
TMEM50A-206	ENST00000498135	CAMSAP1	Q5T5Y3	1602 aa		33.22	■■■□□ 2.91
TMEM50A-206	ENST00000498135	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	33.22	■■■□□ 2.91
TMEM50A-206	ENST00000498135	AFAP1	Q8N556	730 aa		33.21	■■■□□ 2.91
TMEM50A-206	ENST00000498135	MED1	Q15648	1581 aa	Predicted RBP	33.19	■■■□□ 2.9
TMEM50A-206	ENST00000498135	CSRNP3	Q8WYN3	585 aa		33.19	■■■□□ 2.9
TMEM50A-206	ENST00000498135	AGL	P35573	1532 aa		33.17	■■■□□ 2.9
TMEM50A-206	ENST00000498135	ABCA6	Q8N139	1617 aa		33.16	■■■□□ 2.9
TMEM50A-206	ENST00000498135	CNTLN	Q9NXG0	1405 aa		33.15	■■■□□ 2.9
TMEM50A-206	ENST00000498135	ARHGAP5	Q13017	1502 aa		33.13	■■■□□ 2.89
TMEM50A-206	ENST00000498135	NCKAP5L	Q9HCH0	1330 aa		33.12	■■■□□ 2.89
TMEM50A-206	ENST00000498135	MLH3	Q9UHC1	1453 aa		33.09	■■■□□ 2.89
TMEM50A-206	ENST00000498135	NPAT	Q14207	1427 aa		33.09	■■■□□ 2.89
TMEM50A-206	ENST00000498135	HSPA1L	P34931	641 aa		33.06	■■■□□ 2.88
TMEM50A-206	ENST00000498135	KIF14	Q15058	1648 aa		33.06	■■■□□ 2.88
TMEM50A-206	ENST00000498135	SCAF1	Q9H7N4	1312 aa	Known RBP	33.05	■■■□□ 2.88
TMEM50A-206	ENST00000498135	PKD2	Q13563	968 aa		33.02	■■■□□ 2.88
TMEM50A-206	ENST00000498135	CDK11A	Q9UQ88	783 aa	Predicted RBP	33.02	■■■□□ 2.88
TMEM50A-206	ENST00000498135	ATP1B4	Q9UN42	357 aa	Predicted RBP	33.01	■■■□□ 2.87
TMEM50A-206	ENST00000498135	MROH2A	A6NES4	1674 aa		33	■■■□□ 2.87
TMEM50A-206	ENST00000498135	PLA2R1	Q13018	1463 aa		32.99	■■■□□ 2.87
TMEM50A-206	ENST00000498135	PHF23	Q9BUL5	403 aa	Predicted RBP	32.99	■■■□□ 2.87
TMEM50A-206	ENST00000498135	PIP4K2B	P78356	416 aa		32.97	■■■□□ 2.87
TMEM50A-206	ENST00000498135	TCOF1	Q13428	1488 aa	Known RBP	32.94	■■■□□ 2.86
TMEM50A-206	ENST00000498135	ZNF142	P52746	1687 aa	Predicted RBP	32.94	■■■□□ 2.86
TMEM50A-206	ENST00000498135	ZMYM3	Q14202	1370 aa		32.94	■■■□□ 2.86
TMEM50A-206	ENST00000498135	TRO	Q12816	1431 aa	Predicted RBP	32.94	■■■□□ 2.86
TMEM50A-206	ENST00000498135	PPP6R1	Q9UPN7	881 aa		32.93	■■■□□ 2.86
TMEM50A-206	ENST00000498135	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.93	■■■□□ 2.86
TMEM50A-206	ENST00000498135	CLIP1	P30622	1438 aa		32.92	■■■□□ 2.86
TMEM50A-206	ENST00000498135	MYO3A	Q8NEV4	1616 aa		32.91	■■■□□ 2.86
TMEM50A-206	ENST00000498135	TOM1	O60784	492 aa		32.91	■■■□□ 2.86
TMEM50A-206	ENST00000498135	ABCC1	P33527	1531 aa		32.9	■■■□□ 2.86
TMEM50A-206	ENST00000498135	KIDINS220	Q9ULH0	1771 aa		32.89	■■■□□ 2.86
TMEM50A-206	ENST00000498135	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.89	■■■□□ 2.86
TMEM50A-206	ENST00000498135	CDC42BPB	Q9Y5S2	1711 aa		32.88	■■■□□ 2.85
TMEM50A-206	ENST00000498135	ITSN2	Q9NZM3	1697 aa		32.87	■■■□□ 2.85
TMEM50A-206	ENST00000498135	FMN1	Q68DA7	1419 aa		32.85	■■■□□ 2.85
TMEM50A-206	ENST00000498135	EEA1	Q15075	1411 aa		32.83	■■■□□ 2.85
TMEM50A-206	ENST00000498135	PREX2	Q70Z35	1606 aa		32.81	■■■□□ 2.84
TMEM50A-206	ENST00000498135	CPS1	P31327	1500 aa		32.8	■■■□□ 2.84
TMEM50A-206	ENST00000498135	CLTC	Q00610	1675 aa	Known RBP	32.79	■■■□□ 2.84
TMEM50A-206	ENST00000498135	PTPRK	Q15262	1439 aa		32.77	■■■□□ 2.84
TMEM50A-206	ENST00000498135	SAMD9L	Q8IVG5	1584 aa		32.7	■■■□□ 2.83
TMEM50A-206	ENST00000498135	SHANK2	Q9UPX8	1470 aa		32.7	■■■□□ 2.83
TMEM50A-206	ENST00000498135	A2ML1	A8K2U0	1454 aa		32.67	■■■□□ 2.82
TMEM50A-206	ENST00000498135	DNMT1	P26358	1616 aa	Known RBP	32.65	■■■□□ 2.82
TMEM50A-206	ENST00000498135	SPAG9	O60271	1321 aa	Known RBP	32.64	■■■□□ 2.82
TMEM50A-206	ENST00000498135	POLR1A	O95602	1720 aa	Predicted RBP	32.64	■■■□□ 2.82
TMEM50A-206	ENST00000498135	LRRIQ1	Q96JM4	1722 aa		32.63	■■■□□ 2.81
TMEM50A-206	ENST00000498135	ARHGAP35	Q9NRY4	1499 aa		32.62	■■■□□ 2.81
TMEM50A-206	ENST00000498135	NEURL4	Q96JN8	1562 aa		32.61	■■■□□ 2.81
TMEM50A-206	ENST00000498135	GGT6	Q6P531	493 aa		32.6	■■■□□ 2.81
TMEM50A-206	ENST00000498135	PLXNC1	O60486	1568 aa		32.6	■■■□□ 2.81
TMEM50A-206	ENST00000498135	ALK	Q9UM73	1620 aa		32.59	■■■□□ 2.81
TMEM50A-206	ENST00000498135	CDC42BPA	Q5VT25	1732 aa		32.59	■■■□□ 2.81
TMEM50A-206	ENST00000498135	SENP3	Q9H4L4	574 aa	Predicted RBP	32.58	■■■□□ 2.81
TMEM50A-206	ENST00000498135	ATP7A	Q04656	1500 aa		32.57	■■■□□ 2.8
TMEM50A-206	ENST00000498135	SYCP2	Q9BX26	1530 aa		32.57	■■■□□ 2.8
TMEM50A-206	ENST00000498135	A2M	P01023	1474 aa		32.57	■■■□□ 2.8
TMEM50A-206	ENST00000498135	ZNF777	Q9ULD5	760 aa	Predicted RBP	32.57	■■■□□ 2.8
TMEM50A-206	ENST00000498135	VWDE	Q8N2E2	1590 aa		32.53	■■■□□ 2.8
TMEM50A-206	ENST00000498135	INO80	Q9ULG1	1556 aa	Predicted RBP	32.5	■■■□□ 2.79
TMEM50A-206	ENST00000498135	UBTF	P17480	764 aa	Known RBP	32.49	■■■□□ 2.79
TMEM50A-206	ENST00000498135	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.49	■■■□□ 2.79
TMEM50A-206	ENST00000498135	RGS17	Q9UGC6	210 aa	Predicted RBP	32.48	■■■□□ 2.79
TMEM50A-206	ENST00000498135	CCDC18	Q5T9S5	1454 aa		32.48	■■■□□ 2.79
TMEM50A-206	ENST00000498135	ANKLE2	Q86XL3	938 aa		32.46	■■■□□ 2.79
TMEM50A-206	ENST00000498135	EHMT2	Q96KQ7	1210 aa		32.45	■■■□□ 2.79
TMEM50A-206	ENST00000498135	TNR	Q92752	1358 aa		32.45	■■■□□ 2.78
TMEM50A-206	ENST00000498135	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.41	■■■□□ 2.78
TMEM50A-206	ENST00000498135	NPHP4	O75161	1426 aa	Predicted RBP	32.41	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms