RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-223ENST00000497318 CDK11AQ9UQ88 783 aaPredicted RBP27.66■■■□□ 2.02
SUPT20H-223ENST00000497318 DMRT2Q9Y5R5 561 aa27.65■■■□□ 2.02
SUPT20H-223ENST00000497318 ATP10AO60312 1499 aa27.64■■■□□ 2.02
SUPT20H-223ENST00000497318 HECW1Q76N89 1606 aa27.64■■■□□ 2.02
SUPT20H-223ENST00000497318 ATP1B4Q9UN42 357 aaPredicted RBP27.64■■■□□ 2.02
SUPT20H-223ENST00000497318 C9orf84Q5VXU9 1444 aa27.6■■■□□ 2.01
SUPT20H-223ENST00000497318 CDK13Q14004 1512 aaKnown RBP27.59■■■□□ 2.01
SUPT20H-223ENST00000497318 MYT1LQ9UL68 1186 aa27.56■■■□□ 2
SUPT20H-223ENST00000497318 ARHGEF12Q9NZN5 1544 aa27.56■■■□□ 2
SUPT20H-223ENST00000497318 FER1L4A9Z1Z3 1794 aa27.55■■■□□ 2
SUPT20H-223ENST00000497318 CEBPAP49715 358 aaPredicted RBP27.55■■■□□ 2
SUPT20H-223ENST00000497318 FMN1Q68DA7 1419 aa27.54■■■□□ 2
SUPT20H-223ENST00000497318 SIGLEC1Q9BZZ2 1709 aa27.54■■■□□ 2
SUPT20H-223ENST00000497318 UBTFP17480 764 aaKnown RBP27.52■■■□□ 2
SUPT20H-223ENST00000497318 ZNF518AQ6AHZ1 1483 aa27.5■■□□□ 1.99
SUPT20H-223ENST00000497318 AFAP1Q8N556 730 aa27.49■■□□□ 1.99
SUPT20H-223ENST00000497318 UHRF1BP1Q6BDS2 1440 aa27.48■■□□□ 1.99
SUPT20H-223ENST00000497318 ESF1Q9H501 851 aaKnown RBP27.47■■□□□ 1.99
SUPT20H-223ENST00000497318 PREX1Q8TCU6 1659 aa27.46■■□□□ 1.99
SUPT20H-223ENST00000497318 CLIP1P30622 1438 aa27.44■■□□□ 1.98
SUPT20H-223ENST00000497318 DISP3Q9P2K9 1392 aa27.44■■□□□ 1.98
SUPT20H-223ENST00000497318 ARHGAP5Q13017 1502 aa27.42■■□□□ 1.98
SUPT20H-223ENST00000497318 MYO5CQ9NQX4 1742 aa27.42■■□□□ 1.98
SUPT20H-223ENST00000497318 TROQ12816 1431 aaPredicted RBP27.41■■□□□ 1.98
SUPT20H-223ENST00000497318 EHMT2Q96KQ7 1210 aa27.4■■□□□ 1.98
SUPT20H-223ENST00000497318 KIF14Q15058 1648 aa27.38■■□□□ 1.97
SUPT20H-223ENST00000497318 SETD1BQ9UPS6 1966 aaKnown RBP27.37■■□□□ 1.97
SUPT20H-223ENST00000497318 KDM5CP41229 1560 aa27.35■■□□□ 1.97
SUPT20H-223ENST00000497318 PTPRTO14522 1441 aa27.35■■□□□ 1.97
SUPT20H-223ENST00000497318 ARHGAP35Q9NRY4 1499 aa27.34■■□□□ 1.97
SUPT20H-223ENST00000497318 MLH3Q9UHC1 1453 aa27.33■■□□□ 1.97
SUPT20H-223ENST00000497318 SOCS7O14512 581 aa27.33■■□□□ 1.97
SUPT20H-223ENST00000497318 TRAPPC8Q9Y2L5 1435 aa27.31■■□□□ 1.96
SUPT20H-223ENST00000497318 REREQ9P2R6 1566 aa27.31■■□□□ 1.96
SUPT20H-223ENST00000497318 STRCQ7RTU9 1775 aa27.3■■□□□ 1.96
SUPT20H-223ENST00000497318 ILDR2Q71H61 639 aa27.3■■□□□ 1.96
SUPT20H-223ENST00000497318 DIP2CQ9Y2E4 1556 aa27.29■■□□□ 1.96
SUPT20H-223ENST00000497318 CNTLNQ9NXG0 1405 aa27.27■■□□□ 1.96
SUPT20H-223ENST00000497318 AGLP35573 1532 aa27.26■■□□□ 1.96
SUPT20H-223ENST00000497318 ABCA6Q8N139 1617 aa27.19■■□□□ 1.94
SUPT20H-223ENST00000497318 C3P01024 1663 aa27.18■■□□□ 1.94
SUPT20H-223ENST00000497318 IQSEC2Q5JU85 1478 aa27.18■■□□□ 1.94
SUPT20H-223ENST00000497318 NCOA1Q15788 1441 aa27.17■■□□□ 1.94
SUPT20H-223ENST00000497318 ABCC1P33527 1531 aa27.16■■□□□ 1.94
SUPT20H-223ENST00000497318 CCDC18Q5T9S5 1454 aa27.16■■□□□ 1.94
SUPT20H-223ENST00000497318 ZNF777Q9ULD5 760 aaPredicted RBP27.15■■□□□ 1.94
SUPT20H-223ENST00000497318 CDC42BPBQ9Y5S2 1711 aa27.15■■□□□ 1.94
SUPT20H-223ENST00000497318 NPATQ14207 1427 aa27.15■■□□□ 1.94
SUPT20H-223ENST00000497318 CASKIN1Q8WXD9 1431 aa27.14■■□□□ 1.93
SUPT20H-223ENST00000497318 SPAG9O60271 1321 aaKnown RBP27.13■■□□□ 1.93
SUPT20H-223ENST00000497318 PREX2Q70Z35 1606 aa27.12■■□□□ 1.93
SUPT20H-223ENST00000497318 LTBP4Q8N2S1 1624 aa27.12■■□□□ 1.93
SUPT20H-223ENST00000497318 ZMYM3Q14202 1370 aa27.11■■□□□ 1.93
SUPT20H-223ENST00000497318 SPATA31D1Q6ZQQ2 1576 aa27.09■■□□□ 1.93
SUPT20H-223ENST00000497318 ITSN2Q9NZM3 1697 aa27.08■■□□□ 1.92
SUPT20H-223ENST00000497318 PKD2Q13563 968 aa27.07■■□□□ 1.92
SUPT20H-223ENST00000497318 NCKAP5LQ9HCH0 1330 aa27.06■■□□□ 1.92
SUPT20H-223ENST00000497318 KIDINS220Q9ULH0 1771 aa27.06■■□□□ 1.92
SUPT20H-223ENST00000497318 UBAP1LF5GYI3 381 aa27.05■■□□□ 1.92
SUPT20H-223ENST00000497318 CAMSAP1Q5T5Y3 1602 aa27.05■■□□□ 1.92
SUPT20H-223ENST00000497318 HNRNPMP52272 730 aaKnown RBP eCLIP27.04■■□□□ 1.92
SUPT20H-223ENST00000497318 LRRIQ1Q96JM4 1722 aa27.04■■□□□ 1.92
SUPT20H-223ENST00000497318 SAMD9LQ8IVG5 1584 aa27.02■■□□□ 1.92
SUPT20H-223ENST00000497318 CHIC1Q5VXU3 224 aa27.01■■□□□ 1.91
SUPT20H-223ENST00000497318 CFDP1Q9UEE9 299 aaPredicted RBP27.01■■□□□ 1.91
SUPT20H-223ENST00000497318 ZNF335Q9H4Z2 1342 aaPredicted RBP27■■□□□ 1.91
SUPT20H-223ENST00000497318 PPP6R1Q9UPN7 881 aa27■■□□□ 1.91
SUPT20H-223ENST00000497318 MROH2AA6NES4 1674 aa26.99■■□□□ 1.91
SUPT20H-223ENST00000497318 PLEKHH2Q8IVE3 1493 aa26.99■■□□□ 1.91
SUPT20H-223ENST00000497318 KIAA1107Q9UPP5 1409 aa26.99■■□□□ 1.91
SUPT20H-223ENST00000497318 GGT6Q6P531 493 aa26.98■■□□□ 1.91
SUPT20H-223ENST00000497318 GPATCH8Q9UKJ3 1502 aaKnown RBP26.97■■□□□ 1.91
SUPT20H-223ENST00000497318 FYCO1Q9BQS8 1478 aa26.97■■□□□ 1.91
SUPT20H-223ENST00000497318 CDC42BPAQ5VT25 1732 aa26.96■■□□□ 1.91
SUPT20H-223ENST00000497318 SYCP2Q9BX26 1530 aa26.95■■□□□ 1.91
SUPT20H-223ENST00000497318 PLA2R1Q13018 1463 aa26.95■■□□□ 1.91
SUPT20H-223ENST00000497318 A2MP01023 1474 aa26.94■■□□□ 1.9
SUPT20H-223ENST00000497318 CCNB3Q8WWL7 1395 aa26.94■■□□□ 1.9
SUPT20H-223ENST00000497318 PTPRKQ15262 1439 aa26.92■■□□□ 1.9
SUPT20H-223ENST00000497318 ATP7AQ04656 1500 aa26.92■■□□□ 1.9
SUPT20H-223ENST00000497318 SUPT6HQ7KZ85 1726 aaKnown RBP26.9■■□□□ 1.9
SUPT20H-223ENST00000497318 TCOF1Q13428 1488 aaKnown RBP26.88■■□□□ 1.89
SUPT20H-223ENST00000497318 CEP170BQ9Y4F5 1589 aaPredicted RBP26.86■■□□□ 1.89
SUPT20H-223ENST00000497318 CLTCQ00610 1675 aaKnown RBP26.85■■□□□ 1.89
SUPT20H-223ENST00000497318 PLXNC1O60486 1568 aa26.85■■□□□ 1.89
SUPT20H-223ENST00000497318 MTUS2Q5JR59 1369 aa26.84■■□□□ 1.89
SUPT20H-223ENST00000497318 MYO3AQ8NEV4 1616 aa26.83■■□□□ 1.89
SUPT20H-223ENST00000497318 ZNF142P52746 1687 aaPredicted RBP26.82■■□□□ 1.88
SUPT20H-223ENST00000497318 INO80Q9ULG1 1556 aaPredicted RBP26.82■■□□□ 1.88
SUPT20H-223ENST00000497318 TOM1O60784 492 aa26.81■■□□□ 1.88
SUPT20H-223ENST00000497318 SCAF1Q9H7N4 1312 aaKnown RBP26.81■■□□□ 1.88
SUPT20H-223ENST00000497318 A2ML1A8K2U0 1454 aa26.8■■□□□ 1.88
SUPT20H-223ENST00000497318 DHX29Q7Z478 1369 aaKnown RBP26.76■■□□□ 1.87
SUPT20H-223ENST00000497318 PIP4K2BP78356 416 aa26.76■■□□□ 1.87
SUPT20H-223ENST00000497318 RTEL1-TNFRSF6BF6WH68 1400 aa26.75■■□□□ 1.87
SUPT20H-223ENST00000497318 ZNF644Q9H582 1327 aaPredicted RBP26.75■■□□□ 1.87
SUPT20H-223ENST00000497318 HSPA1LP34931 641 aa26.74■■□□□ 1.87
SUPT20H-223ENST00000497318 TNRQ92752 1358 aa26.73■■□□□ 1.87
SUPT20H-223ENST00000497318 KIF3BO15066 747 aa26.73■■□□□ 1.87
SUPT20H-223ENST00000497318 ANKLE2Q86XL3 938 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms