RNA–Protein interactions for RNA: ENST00000497147.1

SCNM1-206, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-206ENST00000497147 MAGI2Q86UL8 1455 aa16.33■□□□□ 0.2
SCNM1-206ENST00000497147 ARHGEF12Q9NZN5 1544 aa16.33■□□□□ 0.2
SCNM1-206ENST00000497147 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.32■□□□□ 0.2
SCNM1-206ENST00000497147 PREX1Q8TCU6 1659 aa16.31■□□□□ 0.2
SCNM1-206ENST00000497147 HECW1Q76N89 1606 aa16.31■□□□□ 0.2
SCNM1-206ENST00000497147 PLEKHD1A6NEE1 506 aa16.31■□□□□ 0.2
SCNM1-206ENST00000497147 CFAP74Q9C0B2 1584 aa16.3■□□□□ 0.2
SCNM1-206ENST00000497147 ATP10AO60312 1499 aa16.27■□□□□ 0.19
SCNM1-206ENST00000497147 SCAPERQ9BY12 1400 aa16.27■□□□□ 0.19
SCNM1-206ENST00000497147 LTBP4Q8N2S1 1624 aa16.25■□□□□ 0.19
SCNM1-206ENST00000497147 PTPRTO14522 1441 aa16.25■□□□□ 0.19
SCNM1-206ENST00000497147 C9orf84Q5VXU9 1444 aa16.24■□□□□ 0.19
SCNM1-206ENST00000497147 UHRF1BP1Q6BDS2 1440 aa16.24■□□□□ 0.19
SCNM1-206ENST00000497147 RANGAP1P46060 587 aaPredicted RBP16.22■□□□□ 0.19
SCNM1-206ENST00000497147 PLCH2O75038 1416 aa16.21■□□□□ 0.19
SCNM1-206ENST00000497147 IQSEC2Q5JU85 1478 aa16.18■□□□□ 0.18
SCNM1-206ENST00000497147 EEA1Q15075 1411 aa16.17■□□□□ 0.18
SCNM1-206ENST00000497147 CDK13Q14004 1512 aaKnown RBP16.15■□□□□ 0.18
SCNM1-206ENST00000497147 CSRNP3Q8WYN3 585 aa16.15■□□□□ 0.18
SCNM1-206ENST00000497147 AFAP1Q8N556 730 aa16.14■□□□□ 0.17
SCNM1-206ENST00000497147 SETD1BQ9UPS6 1966 aaKnown RBP16.14■□□□□ 0.17
SCNM1-206ENST00000497147 NCOA1Q15788 1441 aa16.13■□□□□ 0.17
SCNM1-206ENST00000497147 EFCAB2Q5VUJ9 269 aa16.13■□□□□ 0.17
SCNM1-206ENST00000497147 C3P01024 1663 aa16.11■□□□□ 0.17
SCNM1-206ENST00000497147 TRAPPC8Q9Y2L5 1435 aa16.11■□□□□ 0.17
SCNM1-206ENST00000497147 ZNF518AQ6AHZ1 1483 aa16.1■□□□□ 0.17
SCNM1-206ENST00000497147 KDM5CP41229 1560 aa16.1■□□□□ 0.17
SCNM1-206ENST00000497147 UBAP1LF5GYI3 381 aa16.1■□□□□ 0.17
SCNM1-206ENST00000497147 DIP2CQ9Y2E4 1556 aa16.09■□□□□ 0.17
SCNM1-206ENST00000497147 ZNF335Q9H4Z2 1342 aaPredicted RBP16.08■□□□□ 0.16
SCNM1-206ENST00000497147 REREQ9P2R6 1566 aa16.07■□□□□ 0.16
SCNM1-206ENST00000497147 NCKAP5LQ9HCH0 1330 aa16.06■□□□□ 0.16
SCNM1-206ENST00000497147 MYT1LQ9UL68 1186 aa16.05■□□□□ 0.16
SCNM1-206ENST00000497147 MYO5CQ9NQX4 1742 aa16.05■□□□□ 0.16
SCNM1-206ENST00000497147 CAMSAP1Q5T5Y3 1602 aa16.05■□□□□ 0.16
SCNM1-206ENST00000497147 ABCA6Q8N139 1617 aa16.05■□□□□ 0.16
SCNM1-206ENST00000497147 ESF1Q9H501 851 aaKnown RBP16.03■□□□□ 0.16
SCNM1-206ENST00000497147 KIF14Q15058 1648 aa16.03■□□□□ 0.16
SCNM1-206ENST00000497147 AGLP35573 1532 aa16.03■□□□□ 0.16
SCNM1-206ENST00000497147 MLH3Q9UHC1 1453 aa16.03■□□□□ 0.16
SCNM1-206ENST00000497147 ARHGAP5Q13017 1502 aa16.02■□□□□ 0.15
SCNM1-206ENST00000497147 HSPA1LP34931 641 aa15.99■□□□□ 0.15
SCNM1-206ENST00000497147 ATP1B4Q9UN42 357 aaPredicted RBP15.99■□□□□ 0.15
SCNM1-206ENST00000497147 NPATQ14207 1427 aa15.99■□□□□ 0.15
SCNM1-206ENST00000497147 CNTLNQ9NXG0 1405 aa15.99■□□□□ 0.15
SCNM1-206ENST00000497147 MED1Q15648 1581 aaPredicted RBP15.99■□□□□ 0.15
SCNM1-206ENST00000497147 TROQ12816 1431 aaPredicted RBP15.96■□□□□ 0.15
SCNM1-206ENST00000497147 CDK11AQ9UQ88 783 aaPredicted RBP15.96■□□□□ 0.15
SCNM1-206ENST00000497147 ZMYM3Q14202 1370 aa15.96■□□□□ 0.15
SCNM1-206ENST00000497147 PKD2Q13563 968 aa15.94■□□□□ 0.14
SCNM1-206ENST00000497147 TCOF1Q13428 1488 aaKnown RBP15.94■□□□□ 0.14
SCNM1-206ENST00000497147 PLA2R1Q13018 1463 aa15.93■□□□□ 0.14
SCNM1-206ENST00000497147 PIP4K2BP78356 416 aa15.93■□□□□ 0.14
SCNM1-206ENST00000497147 KIDINS220Q9ULH0 1771 aa15.92■□□□□ 0.14
SCNM1-206ENST00000497147 CDC42BPBQ9Y5S2 1711 aa15.92■□□□□ 0.14
SCNM1-206ENST00000497147 EHMT2Q96KQ7 1210 aa15.92■□□□□ 0.14
SCNM1-206ENST00000497147 ABCC1P33527 1531 aa15.92■□□□□ 0.14
SCNM1-206ENST00000497147 SCAF1Q9H7N4 1312 aaKnown RBP15.92■□□□□ 0.14
SCNM1-206ENST00000497147 MROH2AA6NES4 1674 aa15.91■□□□□ 0.14
SCNM1-206ENST00000497147 FMN1Q68DA7 1419 aa15.91■□□□□ 0.14
SCNM1-206ENST00000497147 PPP6R1Q9UPN7 881 aa15.9■□□□□ 0.14
SCNM1-206ENST00000497147 CLIP1P30622 1438 aa15.89■□□□□ 0.13
SCNM1-206ENST00000497147 MYO3AQ8NEV4 1616 aa15.89■□□□□ 0.13
SCNM1-206ENST00000497147 ZNF142P52746 1687 aaPredicted RBP15.89■□□□□ 0.13
SCNM1-206ENST00000497147 PTPRKQ15262 1439 aa15.88■□□□□ 0.13
SCNM1-206ENST00000497147 UBTFP17480 764 aaKnown RBP15.88■□□□□ 0.13
SCNM1-206ENST00000497147 ITSN2Q9NZM3 1697 aa15.88■□□□□ 0.13
SCNM1-206ENST00000497147 CEP170BQ9Y4F5 1589 aaPredicted RBP15.87■□□□□ 0.13
SCNM1-206ENST00000497147 ARHGAP35Q9NRY4 1499 aa15.87■□□□□ 0.13
SCNM1-206ENST00000497147 PREX2Q70Z35 1606 aa15.86■□□□□ 0.13
SCNM1-206ENST00000497147 TOM1O60784 492 aa15.86■□□□□ 0.13
SCNM1-206ENST00000497147 SAMD9LQ8IVG5 1584 aa15.85■□□□□ 0.13
SCNM1-206ENST00000497147 LRRIQ1Q96JM4 1722 aa15.85■□□□□ 0.13
SCNM1-206ENST00000497147 CLTCQ00610 1675 aaKnown RBP15.84■□□□□ 0.13
SCNM1-206ENST00000497147 PHF23Q9BUL5 403 aaPredicted RBP15.84■□□□□ 0.13
SCNM1-206ENST00000497147 ALKQ9UM73 1620 aa15.82■□□□□ 0.12
SCNM1-206ENST00000497147 SUPT6HQ7KZ85 1726 aaKnown RBP15.82■□□□□ 0.12
SCNM1-206ENST00000497147 CPS1P31327 1500 aa15.81■□□□□ 0.12
SCNM1-206ENST00000497147 SHANK2Q9UPX8 1470 aa15.81■□□□□ 0.12
SCNM1-206ENST00000497147 SPAG9O60271 1321 aaKnown RBP15.8■□□□□ 0.12
SCNM1-206ENST00000497147 PLXNC1O60486 1568 aa15.79■□□□□ 0.12
SCNM1-206ENST00000497147 A2ML1A8K2U0 1454 aa15.79■□□□□ 0.12
SCNM1-206ENST00000497147 HNRNPMP52272 730 aaKnown RBP eCLIP15.79■□□□□ 0.12
SCNM1-206ENST00000497147 GGT6Q6P531 493 aa15.79■□□□□ 0.12
SCNM1-206ENST00000497147 ZNF777Q9ULD5 760 aaPredicted RBP15.79■□□□□ 0.12
SCNM1-206ENST00000497147 DNMT1P26358 1616 aaKnown RBP15.79■□□□□ 0.12
SCNM1-206ENST00000497147 NEURL4Q96JN8 1562 aa15.79■□□□□ 0.12
SCNM1-206ENST00000497147 SYCP2Q9BX26 1530 aa15.78■□□□□ 0.12
SCNM1-206ENST00000497147 CDC42BPAQ5VT25 1732 aa15.77■□□□□ 0.12
SCNM1-206ENST00000497147 RGS17Q9UGC6 210 aaPredicted RBP15.77■□□□□ 0.12
SCNM1-206ENST00000497147 A2MP01023 1474 aa15.77■□□□□ 0.11
SCNM1-206ENST00000497147 ATP7AQ04656 1500 aa15.76■□□□□ 0.11
SCNM1-206ENST00000497147 SENP3Q9H4L4 574 aaPredicted RBP15.75■□□□□ 0.11
SCNM1-206ENST00000497147 VWDEQ8N2E2 1590 aa15.75■□□□□ 0.11
SCNM1-206ENST00000497147 FBXO31Q5XUX0 539 aaPredicted RBP15.73■□□□□ 0.11
SCNM1-206ENST00000497147 INO80Q9ULG1 1556 aaPredicted RBP15.73■□□□□ 0.11
SCNM1-206ENST00000497147 GPATCH8Q9UKJ3 1502 aaKnown RBP15.73■□□□□ 0.11
SCNM1-206ENST00000497147 POLR1AO95602 1720 aaPredicted RBP15.71■□□□□ 0.11
SCNM1-206ENST00000497147 LOC105371045A0A1W2PR82 267 aa15.71■□□□□ 0.11
SCNM1-206ENST00000497147 CASKIN1Q8WXD9 1431 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms