RNA–Protein interactions for RNA: ENST00000496870.1

SP140L-209, Transcript of SP140 nuclear body protein like, humanhuman

TSL 5

Gene SP140L, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140L-209ENST00000496870 PREX1Q8TCU6 1659 aa23.13■■□□□ 1.29
SP140L-209ENST00000496870 HECW1Q76N89 1606 aa23.12■■□□□ 1.29
SP140L-209ENST00000496870 DMRT2Q9Y5R5 561 aa23.12■■□□□ 1.29
SP140L-209ENST00000496870 SPATA31D1Q6ZQQ2 1576 aa23.1■■□□□ 1.29
SP140L-209ENST00000496870 ARHGEF12Q9NZN5 1544 aa23.08■■□□□ 1.29
SP140L-209ENST00000496870 SCAPERQ9BY12 1400 aa23.08■■□□□ 1.28
SP140L-209ENST00000496870 CEBPAP49715 358 aaPredicted RBP23.07■■□□□ 1.28
SP140L-209ENST00000496870 C9orf84Q5VXU9 1444 aa23.06■■□□□ 1.28
SP140L-209ENST00000496870 ATP10AO60312 1499 aa23.05■■□□□ 1.28
SP140L-209ENST00000496870 UHRF1BP1Q6BDS2 1440 aa23.05■■□□□ 1.28
SP140L-209ENST00000496870 CSRNP3Q8WYN3 585 aa23.04■■□□□ 1.28
SP140L-209ENST00000496870 STRCQ7RTU9 1775 aa23.02■■□□□ 1.28
SP140L-209ENST00000496870 PLCH2O75038 1416 aa22.99■■□□□ 1.27
SP140L-209ENST00000496870 CHIC1Q5VXU3 224 aa22.98■■□□□ 1.27
SP140L-209ENST00000496870 CDK13Q14004 1512 aaKnown RBP22.98■■□□□ 1.27
SP140L-209ENST00000496870 PTPRTO14522 1441 aa22.94■■□□□ 1.26
SP140L-209ENST00000496870 EFCAB2Q5VUJ9 269 aa22.94■■□□□ 1.26
SP140L-209ENST00000496870 MYT1LQ9UL68 1186 aa22.94■■□□□ 1.26
SP140L-209ENST00000496870 SETD1BQ9UPS6 1966 aaKnown RBP22.92■■□□□ 1.26
SP140L-209ENST00000496870 ZNF518AQ6AHZ1 1483 aa22.92■■□□□ 1.26
SP140L-209ENST00000496870 MYO5CQ9NQX4 1742 aa22.89■■□□□ 1.26
SP140L-209ENST00000496870 ESF1Q9H501 851 aaKnown RBP22.88■■□□□ 1.25
SP140L-209ENST00000496870 ATP1B4Q9UN42 357 aaPredicted RBP22.88■■□□□ 1.25
SP140L-209ENST00000496870 LTBP4Q8N2S1 1624 aa22.86■■□□□ 1.25
SP140L-209ENST00000496870 IQSEC2Q5JU85 1478 aa22.85■■□□□ 1.25
SP140L-209ENST00000496870 AFAP1Q8N556 730 aa22.85■■□□□ 1.25
SP140L-209ENST00000496870 ARHGAP5Q13017 1502 aa22.84■■□□□ 1.25
SP140L-209ENST00000496870 KDM5CP41229 1560 aa22.84■■□□□ 1.25
SP140L-209ENST00000496870 C3P01024 1663 aa22.84■■□□□ 1.25
SP140L-209ENST00000496870 DIP2CQ9Y2E4 1556 aa22.83■■□□□ 1.25
SP140L-209ENST00000496870 EEA1Q15075 1411 aa22.82■■□□□ 1.24
SP140L-209ENST00000496870 CDK11AQ9UQ88 783 aaPredicted RBP22.82■■□□□ 1.24
SP140L-209ENST00000496870 NCOA1Q15788 1441 aa22.81■■□□□ 1.24
SP140L-209ENST00000496870 TRAPPC8Q9Y2L5 1435 aa22.81■■□□□ 1.24
SP140L-209ENST00000496870 KIF14Q15058 1648 aa22.8■■□□□ 1.24
SP140L-209ENST00000496870 REREQ9P2R6 1566 aa22.8■■□□□ 1.24
SP140L-209ENST00000496870 ABCA6Q8N139 1617 aa22.77■■□□□ 1.24
SP140L-209ENST00000496870 CLIP1P30622 1438 aa22.74■■□□□ 1.23
SP140L-209ENST00000496870 FMN1Q68DA7 1419 aa22.74■■□□□ 1.23
SP140L-209ENST00000496870 UBAP1LF5GYI3 381 aa22.74■■□□□ 1.23
SP140L-209ENST00000496870 TROQ12816 1431 aaPredicted RBP22.74■■□□□ 1.23
SP140L-209ENST00000496870 CNTLNQ9NXG0 1405 aa22.74■■□□□ 1.23
SP140L-209ENST00000496870 MLH3Q9UHC1 1453 aa22.73■■□□□ 1.23
SP140L-209ENST00000496870 AGLP35573 1532 aa22.73■■□□□ 1.23
SP140L-209ENST00000496870 CAMSAP1Q5T5Y3 1602 aa22.72■■□□□ 1.23
SP140L-209ENST00000496870 ZNF335Q9H4Z2 1342 aaPredicted RBP22.69■■□□□ 1.22
SP140L-209ENST00000496870 NCKAP5LQ9HCH0 1330 aa22.67■■□□□ 1.22
SP140L-209ENST00000496870 NPATQ14207 1427 aa22.66■■□□□ 1.22
SP140L-209ENST00000496870 ABCC1P33527 1531 aa22.65■■□□□ 1.22
SP140L-209ENST00000496870 EHMT2Q96KQ7 1210 aa22.64■■□□□ 1.21
SP140L-209ENST00000496870 CDC42BPBQ9Y5S2 1711 aa22.63■■□□□ 1.21
SP140L-209ENST00000496870 ITSN2Q9NZM3 1697 aa22.62■■□□□ 1.21
SP140L-209ENST00000496870 UBTFP17480 764 aaKnown RBP22.61■■□□□ 1.21
SP140L-209ENST00000496870 PREX2Q70Z35 1606 aa22.6■■□□□ 1.21
SP140L-209ENST00000496870 ARHGAP35Q9NRY4 1499 aa22.6■■□□□ 1.21
SP140L-209ENST00000496870 MROH2AA6NES4 1674 aa22.6■■□□□ 1.21
SP140L-209ENST00000496870 KIDINS220Q9ULH0 1771 aa22.6■■□□□ 1.21
SP140L-209ENST00000496870 ZMYM3Q14202 1370 aa22.6■■□□□ 1.21
SP140L-209ENST00000496870 SCAF1Q9H7N4 1312 aaKnown RBP22.59■■□□□ 1.21
SP140L-209ENST00000496870 PKD2Q13563 968 aa22.59■■□□□ 1.21
SP140L-209ENST00000496870 PLA2R1Q13018 1463 aa22.56■■□□□ 1.2
SP140L-209ENST00000496870 MYO3AQ8NEV4 1616 aa22.54■■□□□ 1.2
SP140L-209ENST00000496870 PPP6R1Q9UPN7 881 aa22.54■■□□□ 1.2
SP140L-209ENST00000496870 MED1Q15648 1581 aaPredicted RBP22.54■■□□□ 1.2
SP140L-209ENST00000496870 ZNF142P52746 1687 aaPredicted RBP22.53■■□□□ 1.2
SP140L-209ENST00000496870 CEP170BQ9Y4F5 1589 aaPredicted RBP22.53■■□□□ 1.2
SP140L-209ENST00000496870 SUPT6HQ7KZ85 1726 aaKnown RBP22.53■■□□□ 1.2
SP140L-209ENST00000496870 LRRIQ1Q96JM4 1722 aa22.53■■□□□ 1.2
SP140L-209ENST00000496870 HSPA1LP34931 641 aa22.52■■□□□ 1.2
SP140L-209ENST00000496870 PIP4K2BP78356 416 aa22.52■■□□□ 1.2
SP140L-209ENST00000496870 TCOF1Q13428 1488 aaKnown RBP22.52■■□□□ 1.2
SP140L-209ENST00000496870 SAMD9LQ8IVG5 1584 aa22.51■■□□□ 1.19
SP140L-209ENST00000496870 ZNF777Q9ULD5 760 aaPredicted RBP22.51■■□□□ 1.19
SP140L-209ENST00000496870 CLTCQ00610 1675 aaKnown RBP22.5■■□□□ 1.19
SP140L-209ENST00000496870 SPAG9O60271 1321 aaKnown RBP22.5■■□□□ 1.19
SP140L-209ENST00000496870 PTPRKQ15262 1439 aa22.48■■□□□ 1.19
SP140L-209ENST00000496870 CCDC18Q5T9S5 1454 aa22.47■■□□□ 1.19
SP140L-209ENST00000496870 SYCP2Q9BX26 1530 aa22.47■■□□□ 1.19
SP140L-209ENST00000496870 CDC42BPAQ5VT25 1732 aa22.46■■□□□ 1.19
SP140L-209ENST00000496870 TOM1O60784 492 aa22.46■■□□□ 1.19
SP140L-209ENST00000496870 PHF23Q9BUL5 403 aaPredicted RBP22.46■■□□□ 1.19
SP140L-209ENST00000496870 GGT6Q6P531 493 aa22.44■■□□□ 1.18
SP140L-209ENST00000496870 ATP7AQ04656 1500 aa22.43■■□□□ 1.18
SP140L-209ENST00000496870 A2MP01023 1474 aa22.42■■□□□ 1.18
SP140L-209ENST00000496870 HNRNPMP52272 730 aaKnown RBP eCLIP22.42■■□□□ 1.18
SP140L-209ENST00000496870 PLXNC1O60486 1568 aa22.41■■□□□ 1.18
SP140L-209ENST00000496870 CPS1P31327 1500 aa22.4■■□□□ 1.18
SP140L-209ENST00000496870 A2ML1A8K2U0 1454 aa22.4■■□□□ 1.18
SP140L-209ENST00000496870 CASKIN1Q8WXD9 1431 aa22.4■■□□□ 1.18
SP140L-209ENST00000496870 INO80Q9ULG1 1556 aaPredicted RBP22.37■■□□□ 1.17
SP140L-209ENST00000496870 DNMT1P26358 1616 aaKnown RBP22.35■■□□□ 1.17
SP140L-209ENST00000496870 SHANK2Q9UPX8 1470 aa22.35■■□□□ 1.17
SP140L-209ENST00000496870 GPATCH8Q9UKJ3 1502 aaKnown RBP22.35■■□□□ 1.17
SP140L-209ENST00000496870 PLEKHH2Q8IVE3 1493 aa22.34■■□□□ 1.17
SP140L-209ENST00000496870 KIAA1107Q9UPP5 1409 aa22.33■■□□□ 1.17
SP140L-209ENST00000496870 POLR1AO95602 1720 aaPredicted RBP22.33■■□□□ 1.17
SP140L-209ENST00000496870 CFDP1Q9UEE9 299 aaPredicted RBP22.32■■□□□ 1.16
SP140L-209ENST00000496870 NEURL4Q96JN8 1562 aa22.31■■□□□ 1.16
SP140L-209ENST00000496870 SENP3Q9H4L4 574 aaPredicted RBP22.3■■□□□ 1.16
SP140L-209ENST00000496870 FYCO1Q9BQS8 1478 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 1360.3 ms