RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 PTPN23Q9H3S7 1636 aa12.79□□□□□ -0.36
TM9SF4-207ENST00000495749 CEP170Q5SW79 1584 aa12.78□□□□□ -0.36
TM9SF4-207ENST00000495749 CARMIL2Q6F5E8 1435 aa12.78□□□□□ -0.36
TM9SF4-207ENST00000495749 FKBP8Q14318 412 aa12.78□□□□□ -0.36
TM9SF4-207ENST00000495749 HECW1Q76N89 1606 aa12.78□□□□□ -0.36
TM9SF4-207ENST00000495749 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.78□□□□□ -0.36
TM9SF4-207ENST00000495749 L3MBTL2Q969R5 705 aa12.78□□□□□ -0.36
TM9SF4-207ENST00000495749 UACAQ9BZF9 1416 aa12.77□□□□□ -0.37
TM9SF4-207ENST00000495749 KIAA0556O60303 1618 aa12.77□□□□□ -0.37
TM9SF4-207ENST00000495749 TIMELESSQ9UNS1 1208 aa12.76□□□□□ -0.37
TM9SF4-207ENST00000495749 PTPRGP23470 1445 aa12.75□□□□□ -0.37
TM9SF4-207ENST00000495749 SLC24A1O60721 1099 aa12.75□□□□□ -0.37
TM9SF4-207ENST00000495749 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.75□□□□□ -0.37
TM9SF4-207ENST00000495749 CLASP1Q7Z460 1538 aa12.74□□□□□ -0.37
TM9SF4-207ENST00000495749 KDM6BO15054 1643 aa12.74□□□□□ -0.37
TM9SF4-207ENST00000495749 ANP32CO43423 234 aa12.73□□□□□ -0.37
TM9SF4-207ENST00000495749 ABCC5O15440 1437 aa12.73□□□□□ -0.37
TM9SF4-207ENST00000495749 TSPY4P0CV99 314 aa12.72□□□□□ -0.37
TM9SF4-207ENST00000495749 TSPY10P0CW01 314 aa12.72□□□□□ -0.37
TM9SF4-207ENST00000495749 KDM2AQ9Y2K7 1162 aa12.72□□□□□ -0.37
TM9SF4-207ENST00000495749 HSPA5P11021 654 aaKnown RBP12.71□□□□□ -0.37
TM9SF4-207ENST00000495749 PKD2Q13563 968 aa12.71□□□□□ -0.37
TM9SF4-207ENST00000495749 OSCARQ8IYS5 282 aa12.71□□□□□ -0.37
TM9SF4-207ENST00000495749 DAPK1P53355 1430 aa12.71□□□□□ -0.37
TM9SF4-207ENST00000495749 TROQ12816 1431 aaPredicted RBP12.71□□□□□ -0.37
TM9SF4-207ENST00000495749 NUP160Q12769 1436 aa12.71□□□□□ -0.38
TM9SF4-207ENST00000495749 NEFLP07196 543 aa12.7□□□□□ -0.38
TM9SF4-207ENST00000495749 RAPGEF6Q8TEU7 1601 aa12.69□□□□□ -0.38
TM9SF4-207ENST00000495749 CCER2I3L3R5 266 aa12.69□□□□□ -0.38
TM9SF4-207ENST00000495749 NBPF8Q3BBV2 869 aa12.69□□□□□ -0.38
TM9SF4-207ENST00000495749 MIA2Q96PC5 1412 aa12.69□□□□□ -0.38
TM9SF4-207ENST00000495749 ARHGEF11O15085 1522 aa12.69□□□□□ -0.38
TM9SF4-207ENST00000495749 ATP10BO94823 1461 aa12.69□□□□□ -0.38
TM9SF4-207ENST00000495749 SENP3-EIF4A1A0A087X0R7 540 aa12.68□□□□□ -0.38
TM9SF4-207ENST00000495749 MYT1LQ9UL68 1186 aa12.67□□□□□ -0.38
TM9SF4-207ENST00000495749 GPATCH8Q9UKJ3 1502 aaKnown RBP12.67□□□□□ -0.38
TM9SF4-207ENST00000495749 RGL3Q3MIN7 710 aa12.66□□□□□ -0.38
TM9SF4-207ENST00000495749 DENND4BO75064 1496 aaPredicted RBP12.66□□□□□ -0.38
TM9SF4-207ENST00000495749 KIF14Q15058 1648 aa12.66□□□□□ -0.38
TM9SF4-207ENST00000495749 TCOF1Q13428 1488 aaKnown RBP12.65□□□□□ -0.38
TM9SF4-207ENST00000495749 C11orf95C9JLR9 678 aaPredicted RBP12.65□□□□□ -0.38
TM9SF4-207ENST00000495749 SHROOM2Q13796 1616 aa12.65□□□□□ -0.38
TM9SF4-207ENST00000495749 ANP32EQ9BTT0 268 aa12.65□□□□□ -0.38
TM9SF4-207ENST00000495749 NUP155O75694 1391 aa12.64□□□□□ -0.39
TM9SF4-207ENST00000495749 EIF4G2P78344 907 aaKnown RBP eCLIP12.64□□□□□ -0.39
TM9SF4-207ENST00000495749 CAMSAP2Q08AD1 1489 aa12.64□□□□□ -0.39
TM9SF4-207ENST00000495749 NCOA1Q15788 1441 aa12.62□□□□□ -0.39
TM9SF4-207ENST00000495749 ERCC6L2Q5T890 1561 aa12.62□□□□□ -0.39
TM9SF4-207ENST00000495749 RIMBP3CA6NJZ7 1639 aa12.62□□□□□ -0.39
TM9SF4-207ENST00000495749 RIMBP3BA6NNM3 1639 aa12.62□□□□□ -0.39
TM9SF4-207ENST00000495749 RIMBP3Q9UFD9 1639 aa12.62□□□□□ -0.39
TM9SF4-207ENST00000495749 WASHC2AQ641Q2 1341 aa12.61□□□□□ -0.39
TM9SF4-207ENST00000495749 ANKRD30AQ9BXX3 1397 aa12.6□□□□□ -0.39
TM9SF4-207ENST00000495749 ANKRD30BQ9BXX2 1392 aa12.6□□□□□ -0.39
TM9SF4-207ENST00000495749 AKNAQ7Z591 1439 aa12.6□□□□□ -0.39
TM9SF4-207ENST00000495749 RBM19Q9Y4C8 960 aaKnown RBP12.59□□□□□ -0.39
TM9SF4-207ENST00000495749 ANKRD50Q9ULJ7 1429 aa12.58□□□□□ -0.39
TM9SF4-207ENST00000495749 DCAF11Q8TEB1 546 aa12.58□□□□□ -0.4
TM9SF4-207ENST00000495749 HNRNPUQ00839 825 aaKnown RBP eCLIP12.58□□□□□ -0.4
TM9SF4-207ENST00000495749 CCDC184Q52MB2 194 aa12.57□□□□□ -0.4
TM9SF4-207ENST00000495749 AFAP1Q8N556 730 aa12.57□□□□□ -0.4
TM9SF4-207ENST00000495749 ROCK1Q13464 1354 aa12.56□□□□□ -0.4
TM9SF4-207ENST00000495749 KIF15Q9NS87 1388 aa12.56□□□□□ -0.4
TM9SF4-207ENST00000495749 C9orf84Q5VXU9 1444 aa12.55□□□□□ -0.4
TM9SF4-207ENST00000495749 FAM9BQ8IZU0 186 aa12.55□□□□□ -0.4
TM9SF4-207ENST00000495749 IRX6P78412 446 aaPredicted RBP12.54□□□□□ -0.4
TM9SF4-207ENST00000495749 SENP3Q9H4L4 574 aaPredicted RBP12.52□□□□□ -0.4
TM9SF4-207ENST00000495749 ABCA8O94911 1581 aa12.52□□□□□ -0.4
TM9SF4-207ENST00000495749 DNMT1P26358 1616 aaKnown RBP12.52□□□□□ -0.41
TM9SF4-207ENST00000495749 KDM5BQ9UGL1 1544 aa12.51□□□□□ -0.41
TM9SF4-207ENST00000495749 PZPP20742 1482 aa12.51□□□□□ -0.41
TM9SF4-207ENST00000495749 CARD11Q9BXL7 1154 aa12.51□□□□□ -0.41
TM9SF4-207ENST00000495749 ABCC10Q5T3U5 1492 aa12.5□□□□□ -0.41
TM9SF4-207ENST00000495749 ARHGAP5Q13017 1502 aa12.49□□□□□ -0.41
TM9SF4-207ENST00000495749 EFCAB2Q5VUJ9 269 aa12.48□□□□□ -0.41
TM9SF4-207ENST00000495749 KIF7Q2M1P5 1343 aa12.48□□□□□ -0.41
TM9SF4-207ENST00000495749 RPRD2Q5VT52 1461 aaKnown RBP12.48□□□□□ -0.41
TM9SF4-207ENST00000495749 KIAA1107Q9UPP5 1409 aa12.48□□□□□ -0.41
TM9SF4-207ENST00000495749 ST20-MTHFSA0A0A6YYL1 179 aa12.47□□□□□ -0.41
TM9SF4-207ENST00000495749 NBPF1Q3BBV0 1214 aa12.47□□□□□ -0.41
TM9SF4-207ENST00000495749 GCC2Q8IWJ2 1684 aa12.47□□□□□ -0.41
TM9SF4-207ENST00000495749 MRS2Q9HD23 443 aa12.47□□□□□ -0.41
TM9SF4-207ENST00000495749 MBD5Q9P267 1494 aa12.45□□□□□ -0.42
TM9SF4-207ENST00000495749 CCDC7Q96M83 1385 aa12.44□□□□□ -0.42
TM9SF4-207ENST00000495749 USP47Q96K76 1375 aa12.43□□□□□ -0.42
TM9SF4-207ENST00000495749 SYCP2Q9BX26 1530 aa12.43□□□□□ -0.42
TM9SF4-207ENST00000495749 PLEKHH2Q8IVE3 1493 aa12.43□□□□□ -0.42
TM9SF4-207ENST00000495749 SPAG9O60271 1321 aaKnown RBP12.43□□□□□ -0.42
TM9SF4-207ENST00000495749 PRKRIP1Q9H875 184 aaPredicted RBP12.42□□□□□ -0.42
TM9SF4-207ENST00000495749 CDC42BPAQ5VT25 1732 aa12.42□□□□□ -0.42
TM9SF4-207ENST00000495749 KIF3BO15066 747 aa12.42□□□□□ -0.42
TM9SF4-207ENST00000495749 MSH5O43196 834 aa12.42□□□□□ -0.42
TM9SF4-207ENST00000495749 NPM1P06748 294 aaKnown RBP eCLIP12.42□□□□□ -0.42
TM9SF4-207ENST00000495749 TEX14Q8IWB6 1497 aa12.42□□□□□ -0.42
TM9SF4-207ENST00000495749 CNTLNQ9NXG0 1405 aa12.41□□□□□ -0.42
TM9SF4-207ENST00000495749 SALL2Q9Y467 1007 aaPredicted RBP12.41□□□□□ -0.42
TM9SF4-207ENST00000495749 TRAPPC8Q9Y2L5 1435 aa12.41□□□□□ -0.42
TM9SF4-207ENST00000495749 CCDC141Q6ZP82 1450 aa12.41□□□□□ -0.42
TM9SF4-207ENST00000495749 RSPH4AQ5TD94 716 aa12.4□□□□□ -0.42
TM9SF4-207ENST00000495749 TTC37Q6PGP7 1564 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms