RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 TOP2BQ02880 1626 aa17.28■□□□□ 0.36
RAB11FIP3-211ENST00000495663 SYNJ1O43426 1573 aa17.27■□□□□ 0.35
RAB11FIP3-211ENST00000495663 MKRN3Q13064 507 aaKnown RBP17.26■□□□□ 0.35
RAB11FIP3-211ENST00000495663 FGD5Q6ZNL6 1462 aa17.23■□□□□ 0.35
RAB11FIP3-211ENST00000495663 POLA1P09884 1462 aaPredicted RBP17.22■□□□□ 0.35
RAB11FIP3-211ENST00000495663 TRIM41Q8WV44 630 aa17.2■□□□□ 0.34
RAB11FIP3-211ENST00000495663 FAM163AQ96GL9 167 aaPredicted RBP17.2■□□□□ 0.34
RAB11FIP3-211ENST00000495663 CABP2Q9NPB3 220 aa17.2■□□□□ 0.34
RAB11FIP3-211ENST00000495663 PDCD7Q8N8D1 485 aaKnown RBP17.19■□□□□ 0.34
RAB11FIP3-211ENST00000495663 SLAIN1Q8ND83 568 aa17.19■□□□□ 0.34
RAB11FIP3-211ENST00000495663 IFT140Q96RY7 1462 aa17.18■□□□□ 0.34
RAB11FIP3-211ENST00000495663 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.18■□□□□ 0.34
RAB11FIP3-211ENST00000495663 POTEMA6NI47 508 aa17.17■□□□□ 0.34
RAB11FIP3-211ENST00000495663 TARBP1Q13395 1621 aaKnown RBP17.17■□□□□ 0.34
RAB11FIP3-211ENST00000495663 SOGA1O94964 1423 aa17.15■□□□□ 0.34
RAB11FIP3-211ENST00000495663 POTEGQ6S5H5 508 aa17.15■□□□□ 0.34
RAB11FIP3-211ENST00000495663 RAD54L2Q9Y4B4 1467 aa17.13■□□□□ 0.33
RAB11FIP3-211ENST00000495663 LCE2DQ5TA82 110 aaPredicted RBP17.13■□□□□ 0.33
RAB11FIP3-211ENST00000495663 WDR97A6NE52 1622 aa17.12■□□□□ 0.33
RAB11FIP3-211ENST00000495663 RNF25Q96BH1 459 aaPredicted RBP17.11■□□□□ 0.33
RAB11FIP3-211ENST00000495663 ABCA10Q8WWZ4 1543 aa17.07■□□□□ 0.32
RAB11FIP3-211ENST00000495663 RIOK3O14730 519 aaKnown RBP17.06■□□□□ 0.32
RAB11FIP3-211ENST00000495663 DPY19L2Q6NUT2 758 aa17.06■□□□□ 0.32
RAB11FIP3-211ENST00000495663 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.06■□□□□ 0.32
RAB11FIP3-211ENST00000495663 EIF4G3O43432 1585 aaKnown RBP17.06■□□□□ 0.32
RAB11FIP3-211ENST00000495663 ZNF608Q9ULD9 1512 aaPredicted RBP17.06■□□□□ 0.32
RAB11FIP3-211ENST00000495663 DNAJC5Q9H3Z4 198 aa17.05■□□□□ 0.32
RAB11FIP3-211ENST00000495663 ABCA5Q8WWZ7 1642 aa17.01■□□□□ 0.31
RAB11FIP3-211ENST00000495663 C3orf67Q6ZVT6 689 aa17.01■□□□□ 0.31
RAB11FIP3-211ENST00000495663 EFCAB3Q8N7B9 438 aa17.01■□□□□ 0.31
RAB11FIP3-211ENST00000495663 L3MBTL3Q96JM7 780 aaPredicted RBP17.01■□□□□ 0.31
RAB11FIP3-211ENST00000495663 TDRD9Q8NDG6 1382 aaKnown RBP17.01■□□□□ 0.31
RAB11FIP3-211ENST00000495663 ILDR1Q86SU0 546 aaPredicted RBP17■□□□□ 0.31
RAB11FIP3-211ENST00000495663 AQRO60306 1485 aaKnown RBP eCLIP16.99■□□□□ 0.31
RAB11FIP3-211ENST00000495663 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.99■□□□□ 0.31
RAB11FIP3-211ENST00000495663 ZFP91Q96JP5 570 aaPredicted RBP16.99■□□□□ 0.31
RAB11FIP3-211ENST00000495663 PBRM1Q86U86 1689 aa16.99■□□□□ 0.31
RAB11FIP3-211ENST00000495663 GAPVD1Q14C86 1478 aa16.97■□□□□ 0.31
RAB11FIP3-211ENST00000495663 VGFO15240 615 aaPredicted RBP16.95■□□□□ 0.3
RAB11FIP3-211ENST00000495663 PLSCR2Q9NRY7 297 aa16.94■□□□□ 0.3
RAB11FIP3-211ENST00000495663 KIF27Q86VH2 1401 aa16.94■□□□□ 0.3
RAB11FIP3-211ENST00000495663 GRIN2BQ13224 1484 aa16.93■□□□□ 0.3
RAB11FIP3-211ENST00000495663 ST18O60284 1047 aa16.91■□□□□ 0.3
RAB11FIP3-211ENST00000495663 ECM2O94769 699 aaPredicted RBP16.9■□□□□ 0.3
RAB11FIP3-211ENST00000495663 BOLA1Q9Y3E2 137 aa16.89■□□□□ 0.29
RAB11FIP3-211ENST00000495663 ERICH3Q5RHP9 1530 aa16.89■□□□□ 0.29
RAB11FIP3-211ENST00000495663 G3V3G9 751 aa16.88■□□□□ 0.29
RAB11FIP3-211ENST00000495663 SNAPC4Q5SXM2 1469 aa16.87■□□□□ 0.29
RAB11FIP3-211ENST00000495663 MAGI1Q96QZ7 1491 aaPredicted RBP16.86■□□□□ 0.29
RAB11FIP3-211ENST00000495663 PKD2Q13563 968 aa16.85■□□□□ 0.29
RAB11FIP3-211ENST00000495663 RUSC2Q8N2Y8 1516 aa16.84■□□□□ 0.29
RAB11FIP3-211ENST00000495663 CUL7Q14999 1698 aa16.82■□□□□ 0.28
RAB11FIP3-211ENST00000495663 ADAMTS12P58397 1594 aa16.82■□□□□ 0.28
RAB11FIP3-211ENST00000495663 BCL11BQ9C0K0 894 aaPredicted RBP16.82■□□□□ 0.28
RAB11FIP3-211ENST00000495663 CHD1O14646 1710 aa16.82■□□□□ 0.28
RAB11FIP3-211ENST00000495663 EEA1Q15075 1411 aa16.8■□□□□ 0.28
RAB11FIP3-211ENST00000495663 SNPHO15079 494 aa16.8■□□□□ 0.28
RAB11FIP3-211ENST00000495663 PHF8Q9UPP1 1060 aa16.8■□□□□ 0.28
RAB11FIP3-211ENST00000495663 IGF1RP08069 1367 aa16.79■□□□□ 0.28
RAB11FIP3-211ENST00000495663 RGL2O15211 777 aa16.79■□□□□ 0.28
RAB11FIP3-211ENST00000495663 STK24Q9Y6E0 443 aa16.79■□□□□ 0.28
RAB11FIP3-211ENST00000495663 SYNJ2O15056 1496 aa16.79■□□□□ 0.28
RAB11FIP3-211ENST00000495663 FHAD1B1AJZ9 1412 aa16.78■□□□□ 0.28
RAB11FIP3-211ENST00000495663 SOX12O15370 315 aa16.77■□□□□ 0.28
RAB11FIP3-211ENST00000495663 MS4A4AQ96JQ5 239 aa16.77■□□□□ 0.28
RAB11FIP3-211ENST00000495663 CHMP7Q8WUX9 453 aaPredicted RBP16.75■□□□□ 0.27
RAB11FIP3-211ENST00000495663 TAOK2Q9UL54 1235 aa16.75■□□□□ 0.27
RAB11FIP3-211ENST00000495663 STK25O00506 426 aa16.74■□□□□ 0.27
RAB11FIP3-211ENST00000495663 PCDH10Q9P2E7 1040 aa16.73■□□□□ 0.27
RAB11FIP3-211ENST00000495663 CARMIL1Q5VZK9 1371 aa16.73■□□□□ 0.27
RAB11FIP3-211ENST00000495663 MARVELD3Q96A59 401 aa16.72■□□□□ 0.27
RAB11FIP3-211ENST00000495663 GRIN2AQ12879 1464 aa16.72■□□□□ 0.27
RAB11FIP3-211ENST00000495663 MICALL2Q8IY33 904 aa16.71■□□□□ 0.27
RAB11FIP3-211ENST00000495663 FAM9AQ8IZU1 332 aaPredicted RBP16.71■□□□□ 0.27
RAB11FIP3-211ENST00000495663 TMEM121BQ9BXQ6 578 aaPredicted RBP16.71■□□□□ 0.27
RAB11FIP3-211ENST00000495663 CDAN1Q8IWY9 1227 aa16.68■□□□□ 0.26
RAB11FIP3-211ENST00000495663 RAPGEF2Q9Y4G8 1499 aa16.67■□□□□ 0.26
RAB11FIP3-211ENST00000495663 PRXQ9BXM0 1461 aa16.67■□□□□ 0.26
RAB11FIP3-211ENST00000495663 NLRP6P59044 892 aa16.64■□□□□ 0.25
RAB11FIP3-211ENST00000495663 CEP170Q5SW79 1584 aa16.63■□□□□ 0.25
RAB11FIP3-211ENST00000495663 KIF21BO75037 1637 aa16.63■□□□□ 0.25
RAB11FIP3-211ENST00000495663 FBXO22Q8NEZ5 403 aa16.62■□□□□ 0.25
RAB11FIP3-211ENST00000495663 NUP160Q12769 1436 aa16.62■□□□□ 0.25
RAB11FIP3-211ENST00000495663 TMEM92Q6UXU6 159 aa16.61■□□□□ 0.25
RAB11FIP3-211ENST00000495663 MFRPQ9BY79 579 aa16.61■□□□□ 0.25
RAB11FIP3-211ENST00000495663 CLASP1Q7Z460 1538 aa16.6■□□□□ 0.25
RAB11FIP3-211ENST00000495663 HOXB3P14651 431 aaPredicted RBP16.59■□□□□ 0.25
RAB11FIP3-211ENST00000495663 EMP3P54852 163 aa16.58■□□□□ 0.24
RAB11FIP3-211ENST00000495663 CTTNBP2Q8WZ74 1663 aa16.58■□□□□ 0.24
RAB11FIP3-211ENST00000495663 GOLGA3Q08378 1498 aa16.54■□□□□ 0.24
RAB11FIP3-211ENST00000495663 KIAA0586Q9BVV6 1533 aa16.53■□□□□ 0.24
RAB11FIP3-211ENST00000495663 IQGAP2Q13576 1575 aa16.51■□□□□ 0.23
RAB11FIP3-211ENST00000495663 ZNF710Q8N1W2 664 aa16.51■□□□□ 0.23
RAB11FIP3-211ENST00000495663 SHROOM2Q13796 1616 aa16.5■□□□□ 0.23
RAB11FIP3-211ENST00000495663 FAM205CA6NFA0 338 aa16.48■□□□□ 0.23
RAB11FIP3-211ENST00000495663 DOK7Q18PE1 504 aa16.48■□□□□ 0.23
RAB11FIP3-211ENST00000495663 POTEB3A0JP26 581 aa16.45■□□□□ 0.22
RAB11FIP3-211ENST00000495663 POTEBQ6S5H4 581 aa16.45■□□□□ 0.22
RAB11FIP3-211ENST00000495663 UBTFP17480 764 aaKnown RBP16.44■□□□□ 0.22
RAB11FIP3-211ENST00000495663 JPH4Q96JJ6 628 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms