RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 CFAP74Q9C0B2 1584 aa25.82■■□□□ 1.72
CHMP2B-205ENST00000494980 UBAP1LF5GYI3 381 aa25.78■■□□□ 1.72
CHMP2B-205ENST00000494980 MAGI2Q86UL8 1455 aa25.78■■□□□ 1.72
CHMP2B-205ENST00000494980 HECW1Q76N89 1606 aa25.77■■□□□ 1.72
CHMP2B-205ENST00000494980 RAPGEF6Q8TEU7 1601 aa25.69■■□□□ 1.7
CHMP2B-205ENST00000494980 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.68■■□□□ 1.7
CHMP2B-205ENST00000494980 HNRNPUL2Q1KMD3 747 aaKnown RBP25.68■■□□□ 1.7
CHMP2B-205ENST00000494980 NCOA1Q15788 1441 aa25.67■■□□□ 1.7
CHMP2B-205ENST00000494980 C9orf84Q5VXU9 1444 aa25.67■■□□□ 1.7
CHMP2B-205ENST00000494980 FAM9AQ8IZU1 332 aaPredicted RBP25.67■■□□□ 1.7
CHMP2B-205ENST00000494980 C3P01024 1663 aa25.66■■□□□ 1.7
CHMP2B-205ENST00000494980 ATP10AO60312 1499 aa25.66■■□□□ 1.7
CHMP2B-205ENST00000494980 P3H3Q8IVL6 736 aa25.64■■□□□ 1.7
CHMP2B-205ENST00000494980 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.61■■□□□ 1.69
CHMP2B-205ENST00000494980 ZNF335Q9H4Z2 1342 aaPredicted RBP25.6■■□□□ 1.69
CHMP2B-205ENST00000494980 HSPA1LP34931 641 aa25.59■■□□□ 1.69
CHMP2B-205ENST00000494980 PHF23Q9BUL5 403 aaPredicted RBP25.59■■□□□ 1.69
CHMP2B-205ENST00000494980 NUP153P49790 1475 aaKnown RBP25.56■■□□□ 1.68
CHMP2B-205ENST00000494980 CAMSAP1Q5T5Y3 1602 aa25.55■■□□□ 1.68
CHMP2B-205ENST00000494980 SCAPERQ9BY12 1400 aa25.54■■□□□ 1.68
CHMP2B-205ENST00000494980 SCAF1Q9H7N4 1312 aaKnown RBP25.53■■□□□ 1.68
CHMP2B-205ENST00000494980 TRAPPC8Q9Y2L5 1435 aa25.5■■□□□ 1.67
CHMP2B-205ENST00000494980 SAMD9Q5K651 1589 aa25.49■■□□□ 1.67
CHMP2B-205ENST00000494980 PLEKHD1A6NEE1 506 aa25.46■■□□□ 1.67
CHMP2B-205ENST00000494980 PIP4K2BP78356 416 aa25.46■■□□□ 1.67
CHMP2B-205ENST00000494980 NCKAP5LQ9HCH0 1330 aa25.43■■□□□ 1.66
CHMP2B-205ENST00000494980 DIP2CQ9Y2E4 1556 aa25.4■■□□□ 1.66
CHMP2B-205ENST00000494980 PRXQ9BXM0 1461 aa25.38■■□□□ 1.65
CHMP2B-205ENST00000494980 REREQ9P2R6 1566 aa25.38■■□□□ 1.65
CHMP2B-205ENST00000494980 SUPT6HQ7KZ85 1726 aaKnown RBP25.37■■□□□ 1.65
CHMP2B-205ENST00000494980 ESF1Q9H501 851 aaKnown RBP25.36■■□□□ 1.65
CHMP2B-205ENST00000494980 PLCH2O75038 1416 aa25.36■■□□□ 1.65
CHMP2B-205ENST00000494980 KDM5CP41229 1560 aa25.35■■□□□ 1.65
CHMP2B-205ENST00000494980 ZNF518AQ6AHZ1 1483 aa25.34■■□□□ 1.65
CHMP2B-205ENST00000494980 ABCA6Q8N139 1617 aa25.34■■□□□ 1.65
CHMP2B-205ENST00000494980 MYO5CQ9NQX4 1742 aa25.33■■□□□ 1.65
CHMP2B-205ENST00000494980 TOM1O60784 492 aa25.32■■□□□ 1.64
CHMP2B-205ENST00000494980 AGLP35573 1532 aa25.32■■□□□ 1.64
CHMP2B-205ENST00000494980 ZNF142P52746 1687 aaPredicted RBP25.31■■□□□ 1.64
CHMP2B-205ENST00000494980 PLA2R1Q13018 1463 aa25.3■■□□□ 1.64
CHMP2B-205ENST00000494980 NPATQ14207 1427 aa25.29■■□□□ 1.64
CHMP2B-205ENST00000494980 CNTLNQ9NXG0 1405 aa25.29■■□□□ 1.64
CHMP2B-205ENST00000494980 TCOF1Q13428 1488 aaKnown RBP25.28■■□□□ 1.64
CHMP2B-205ENST00000494980 PKD2Q13563 968 aa25.28■■□□□ 1.64
CHMP2B-205ENST00000494980 MYT1LQ9UL68 1186 aa25.28■■□□□ 1.64
CHMP2B-205ENST00000494980 MYO3AQ8NEV4 1616 aa25.27■■□□□ 1.64
CHMP2B-205ENST00000494980 MROH2AA6NES4 1674 aa25.26■■□□□ 1.63
CHMP2B-205ENST00000494980 PPP6R1Q9UPN7 881 aa25.25■■□□□ 1.63
CHMP2B-205ENST00000494980 AFAP1Q8N556 730 aa25.24■■□□□ 1.63
CHMP2B-205ENST00000494980 EFCAB2Q5VUJ9 269 aa25.23■■□□□ 1.63
CHMP2B-205ENST00000494980 CEP170BQ9Y4F5 1589 aaPredicted RBP25.22■■□□□ 1.63
CHMP2B-205ENST00000494980 CPS1P31327 1500 aa25.22■■□□□ 1.63
CHMP2B-205ENST00000494980 CDK13Q14004 1512 aaKnown RBP25.22■■□□□ 1.63
CHMP2B-205ENST00000494980 ALKQ9UM73 1620 aa25.21■■□□□ 1.63
CHMP2B-205ENST00000494980 RGS17Q9UGC6 210 aaPredicted RBP25.2■■□□□ 1.62
CHMP2B-205ENST00000494980 SENP3Q9H4L4 574 aaPredicted RBP25.18■■□□□ 1.62
CHMP2B-205ENST00000494980 MLH3Q9UHC1 1453 aa25.15■■□□□ 1.62
CHMP2B-205ENST00000494980 PTPRKQ15262 1439 aa25.15■■□□□ 1.62
CHMP2B-205ENST00000494980 ARHGAP5Q13017 1502 aa25.14■■□□□ 1.62
CHMP2B-205ENST00000494980 POLR1AO95602 1720 aaPredicted RBP25.13■■□□□ 1.61
CHMP2B-205ENST00000494980 SHANK2Q9UPX8 1470 aa25.13■■□□□ 1.61
CHMP2B-205ENST00000494980 ZMYM3Q14202 1370 aa25.12■■□□□ 1.61
CHMP2B-205ENST00000494980 RANGAP1P46060 587 aaPredicted RBP25.11■■□□□ 1.61
CHMP2B-205ENST00000494980 KIF14Q15058 1648 aa25.11■■□□□ 1.61
CHMP2B-205ENST00000494980 CLTCQ00610 1675 aaKnown RBP25.1■■□□□ 1.61
CHMP2B-205ENST00000494980 SETD1AO15047 1707 aaKnown RBP25.1■■□□□ 1.61
CHMP2B-205ENST00000494980 SRCAPQ6ZRS2 3230 aa25.08■■□□□ 1.61
CHMP2B-205ENST00000494980 KIDINS220Q9ULH0 1771 aa25.08■■□□□ 1.6
CHMP2B-205ENST00000494980 NEURL4Q96JN8 1562 aa25.06■■□□□ 1.6
CHMP2B-205ENST00000494980 VWDEQ8N2E2 1590 aa25.02■■□□□ 1.6
CHMP2B-205ENST00000494980 DNMT1P26358 1616 aaKnown RBP25.02■■□□□ 1.6
CHMP2B-205ENST00000494980 ITSN2Q9NZM3 1697 aa25.02■■□□□ 1.6
CHMP2B-205ENST00000494980 POTEAQ6S8J7 498 aa25.01■■□□□ 1.59
CHMP2B-205ENST00000494980 CDC42BPBQ9Y5S2 1711 aa25■■□□□ 1.59
CHMP2B-205ENST00000494980 ABCC1P33527 1531 aa24.99■■□□□ 1.59
CHMP2B-205ENST00000494980 A2ML1A8K2U0 1454 aa24.97■■□□□ 1.59
CHMP2B-205ENST00000494980 RNF17Q9BXT8 1623 aaKnown RBP24.97■■□□□ 1.59
CHMP2B-205ENST00000494980 PREX2Q70Z35 1606 aa24.9■■□□□ 1.58
CHMP2B-205ENST00000494980 STRCP1A6NGW2 1772 aa24.9■■□□□ 1.58
CHMP2B-205ENST00000494980 TROQ12816 1431 aaPredicted RBP24.86■■□□□ 1.57
CHMP2B-205ENST00000494980 LRRC7Q96NW7 1537 aa24.86■■□□□ 1.57
CHMP2B-205ENST00000494980 SYNMO15061 1565 aa24.85■■□□□ 1.57
CHMP2B-205ENST00000494980 SAMD9LQ8IVG5 1584 aa24.85■■□□□ 1.57
CHMP2B-205ENST00000494980 CDK11AQ9UQ88 783 aaPredicted RBP24.84■■□□□ 1.57
CHMP2B-205ENST00000494980 ATP1B4Q9UN42 357 aaPredicted RBP24.83■■□□□ 1.57
CHMP2B-205ENST00000494980 CLIP1P30622 1438 aa24.83■■□□□ 1.57
CHMP2B-205ENST00000494980 PLXNC1O60486 1568 aa24.83■■□□□ 1.57
CHMP2B-205ENST00000494980 NPHP4O75161 1426 aaPredicted RBP24.79■■□□□ 1.56
CHMP2B-205ENST00000494980 IQGAP1P46940 1657 aa24.79■■□□□ 1.56
CHMP2B-205ENST00000494980 DEPDC5O75140 1603 aa24.78■■□□□ 1.56
CHMP2B-205ENST00000494980 GGT6Q6P531 493 aa24.76■■□□□ 1.55
CHMP2B-205ENST00000494980 ANKLE2Q86XL3 938 aa24.76■■□□□ 1.55
CHMP2B-205ENST00000494980 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.76■■□□□ 1.55
CHMP2B-205ENST00000494980 MED14O60244 1454 aa24.76■■□□□ 1.55
CHMP2B-205ENST00000494980 CSRNP3Q8WYN3 585 aa24.75■■□□□ 1.55
CHMP2B-205ENST00000494980 UPF1Q92900 1129 aaKnown RBP eCLIP24.74■■□□□ 1.55
CHMP2B-205ENST00000494980 ATP7AQ04656 1500 aa24.74■■□□□ 1.55
CHMP2B-205ENST00000494980 CDC42BPAQ5VT25 1732 aa24.74■■□□□ 1.55
CHMP2B-205ENST00000494980 LRRIQ1Q96JM4 1722 aa24.74■■□□□ 1.55
CHMP2B-205ENST00000494980 A2MP01023 1474 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms