RNA–Protein interactions for RNA: ENST00000494954.1

PNKD-208, Transcript of PNKD, MBL domain containing, humanhuman

TSL 3

Gene PNKD, Length 248 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKD-208ENST00000494954 SPATA31D1Q6ZQQ2 1576 aa10.2□□□□□ -0.78
PNKD-208ENST00000494954 KCNH8Q96L42 1107 aa10.2□□□□□ -0.78
PNKD-208ENST00000494954 DENND4BO75064 1496 aaPredicted RBP10.19□□□□□ -0.78
PNKD-208ENST00000494954 AKNAQ7Z591 1439 aa10.19□□□□□ -0.78
PNKD-208ENST00000494954 HSPA2P54652 639 aa10.18□□□□□ -0.78
PNKD-208ENST00000494954 SPINK5Q9NQ38 1064 aaPredicted RBP10.18□□□□□ -0.78
PNKD-208ENST00000494954 ARHGEF12Q9NZN5 1544 aa10.17□□□□□ -0.78
PNKD-208ENST00000494954 SUPT5HO00267 1087 aaKnown RBP10.17□□□□□ -0.78
PNKD-208ENST00000494954 EFCAB5A4FU69 1503 aa10.16□□□□□ -0.78
PNKD-208ENST00000494954 PRXQ9BXM0 1461 aa10.16□□□□□ -0.78
PNKD-208ENST00000494954 RICTORQ6R327 1708 aa10.16□□□□□ -0.78
PNKD-208ENST00000494954 RIMS1Q86UR5 1692 aaKnown RBP10.15□□□□□ -0.78
PNKD-208ENST00000494954 CAPN15O75808 1086 aa10.15□□□□□ -0.78
PNKD-208ENST00000494954 ARID4BQ4LE39 1312 aaPredicted RBP10.14□□□□□ -0.79
PNKD-208ENST00000494954 LTBP4Q8N2S1 1624 aa10.14□□□□□ -0.79
PNKD-208ENST00000494954 FAM9AQ8IZU1 332 aaPredicted RBP10.13□□□□□ -0.79
PNKD-208ENST00000494954 CFAP74Q9C0B2 1584 aa10.13□□□□□ -0.79
PNKD-208ENST00000494954 ZFYVE16Q7Z3T8 1539 aa10.12□□□□□ -0.79
PNKD-208ENST00000494954 PREX1Q8TCU6 1659 aa10.12□□□□□ -0.79
PNKD-208ENST00000494954 CTTNBP2Q8WZ74 1663 aa10.12□□□□□ -0.79
PNKD-208ENST00000494954 DSG3P32926 999 aa10.12□□□□□ -0.79
PNKD-208ENST00000494954 SLC4A2P04920 1241 aa10.11□□□□□ -0.79
PNKD-208ENST00000494954 STRCQ7RTU9 1775 aa10.11□□□□□ -0.79
PNKD-208ENST00000494954 NUP153P49790 1475 aaKnown RBP10.1□□□□□ -0.79
PNKD-208ENST00000494954 UHRF1BP1Q6BDS2 1440 aa10.09□□□□□ -0.79
PNKD-208ENST00000494954 SIGLEC1Q9BZZ2 1709 aa10.09□□□□□ -0.79
PNKD-208ENST00000494954 ATP10AO60312 1499 aa10.09□□□□□ -0.79
PNKD-208ENST00000494954 SAMD9Q5K651 1589 aa10.09□□□□□ -0.79
PNKD-208ENST00000494954 REREQ9P2R6 1566 aa10.08□□□□□ -0.8
PNKD-208ENST00000494954 C9orf84Q5VXU9 1444 aa10.07□□□□□ -0.8
PNKD-208ENST00000494954 RAPGEF6Q8TEU7 1601 aa10.06□□□□□ -0.8
PNKD-208ENST00000494954 SETD1BQ9UPS6 1966 aaKnown RBP10.06□□□□□ -0.8
PNKD-208ENST00000494954 NCOA1Q15788 1441 aa10.06□□□□□ -0.8
PNKD-208ENST00000494954 HECW1Q76N89 1606 aa10.05□□□□□ -0.8
PNKD-208ENST00000494954 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.05□□□□□ -0.8
PNKD-208ENST00000494954 FER1L4A9Z1Z3 1794 aa10.05□□□□□ -0.8
PNKD-208ENST00000494954 PLCH2O75038 1416 aa10.05□□□□□ -0.8
PNKD-208ENST00000494954 TRAPPC8Q9Y2L5 1435 aa10.04□□□□□ -0.8
PNKD-208ENST00000494954 AGLP35573 1532 aa10.03□□□□□ -0.8
PNKD-208ENST00000494954 KDM5CP41229 1560 aa10.02□□□□□ -0.81
PNKD-208ENST00000494954 NPATQ14207 1427 aa10.02□□□□□ -0.81
PNKD-208ENST00000494954 PLEKHD1A6NEE1 506 aa10.02□□□□□ -0.81
PNKD-208ENST00000494954 SCAPERQ9BY12 1400 aa10.01□□□□□ -0.81
PNKD-208ENST00000494954 ZNF518AQ6AHZ1 1483 aa10.01□□□□□ -0.81
PNKD-208ENST00000494954 CNTLNQ9NXG0 1405 aa10□□□□□ -0.81
PNKD-208ENST00000494954 PLA2R1Q13018 1463 aa9.99□□□□□ -0.81
PNKD-208ENST00000494954 MLH3Q9UHC1 1453 aa9.98□□□□□ -0.81
PNKD-208ENST00000494954 TCOF1Q13428 1488 aaKnown RBP9.97□□□□□ -0.81
PNKD-208ENST00000494954 CEBPAP49715 358 aaPredicted RBP9.96□□□□□ -0.82
PNKD-208ENST00000494954 PKD2Q13563 968 aa9.95□□□□□ -0.82
PNKD-208ENST00000494954 EFCAB2Q5VUJ9 269 aa9.95□□□□□ -0.82
PNKD-208ENST00000494954 MED1Q15648 1581 aaPredicted RBP9.93□□□□□ -0.82
PNKD-208ENST00000494954 DIP2CQ9Y2E4 1556 aa9.93□□□□□ -0.82
PNKD-208ENST00000494954 ARID3CA6NKF2 412 aa9.93□□□□□ -0.82
PNKD-208ENST00000494954 MLECQ14165 292 aa9.93□□□□□ -0.82
PNKD-208ENST00000494954 ABCB7O75027 752 aa9.92□□□□□ -0.82
PNKD-208ENST00000494954 C3P01024 1663 aa9.92□□□□□ -0.82
PNKD-208ENST00000494954 UBAP1LF5GYI3 381 aa9.91□□□□□ -0.82
PNKD-208ENST00000494954 APLP2Q06481 763 aa9.91□□□□□ -0.82
PNKD-208ENST00000494954 MROH2AA6NES4 1674 aa9.9□□□□□ -0.82
PNKD-208ENST00000494954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.9□□□□□ -0.82
PNKD-208ENST00000494954 HNRNPUL2Q1KMD3 747 aaKnown RBP9.9□□□□□ -0.82
PNKD-208ENST00000494954 ZNF219Q9P2Y4 722 aaPredicted RBP9.9□□□□□ -0.82
PNKD-208ENST00000494954 CAMSAP1Q5T5Y3 1602 aa9.89□□□□□ -0.83
PNKD-208ENST00000494954 ZNF335Q9H4Z2 1342 aaPredicted RBP9.89□□□□□ -0.83
PNKD-208ENST00000494954 CPS1P31327 1500 aa9.89□□□□□ -0.83
PNKD-208ENST00000494954 P3H3Q8IVL6 736 aa9.89□□□□□ -0.83
PNKD-208ENST00000494954 ZNF142P52746 1687 aaPredicted RBP9.89□□□□□ -0.83
PNKD-208ENST00000494954 POTEHQ6S545 545 aa9.87□□□□□ -0.83
PNKD-208ENST00000494954 AFAP1Q8N556 730 aa9.87□□□□□ -0.83
PNKD-208ENST00000494954 ABCA6Q8N139 1617 aa9.86□□□□□ -0.83
PNKD-208ENST00000494954 HSPA1LP34931 641 aa9.86□□□□□ -0.83
PNKD-208ENST00000494954 ZMYM3Q14202 1370 aa9.86□□□□□ -0.83
PNKD-208ENST00000494954 TROQ12816 1431 aaPredicted RBP9.85□□□□□ -0.83
PNKD-208ENST00000494954 EEA1Q15075 1411 aa9.85□□□□□ -0.83
PNKD-208ENST00000494954 PTPRKQ15262 1439 aa9.85□□□□□ -0.83
PNKD-208ENST00000494954 TOM1O60784 492 aa9.85□□□□□ -0.83
PNKD-208ENST00000494954 CSRNP3Q8WYN3 585 aa9.85□□□□□ -0.83
PNKD-208ENST00000494954 CDK11AQ9UQ88 783 aaPredicted RBP9.85□□□□□ -0.83
PNKD-208ENST00000494954 SAMD1Q6SPF0 538 aaPredicted RBP9.84□□□□□ -0.83
PNKD-208ENST00000494954 MYO5CQ9NQX4 1742 aa9.84□□□□□ -0.83
PNKD-208ENST00000494954 CEP170BQ9Y4F5 1589 aaPredicted RBP9.84□□□□□ -0.83
PNKD-208ENST00000494954 ABCC1P33527 1531 aa9.83□□□□□ -0.84
PNKD-208ENST00000494954 CDK13Q14004 1512 aaKnown RBP9.83□□□□□ -0.84
PNKD-208ENST00000494954 ESF1Q9H501 851 aaKnown RBP9.83□□□□□ -0.84
PNKD-208ENST00000494954 FMN1Q68DA7 1419 aa9.82□□□□□ -0.84
PNKD-208ENST00000494954 ALKQ9UM73 1620 aa9.82□□□□□ -0.84
PNKD-208ENST00000494954 PLXNC1O60486 1568 aa9.82□□□□□ -0.84
PNKD-208ENST00000494954 KIF14Q15058 1648 aa9.82□□□□□ -0.84
PNKD-208ENST00000494954 A2ML1A8K2U0 1454 aa9.81□□□□□ -0.84
PNKD-208ENST00000494954 MED14O60244 1454 aa9.81□□□□□ -0.84
PNKD-208ENST00000494954 SHANK2Q9UPX8 1470 aa9.81□□□□□ -0.84
PNKD-208ENST00000494954 MYO3AQ8NEV4 1616 aa9.81□□□□□ -0.84
PNKD-208ENST00000494954 ARHGAP5Q13017 1502 aa9.81□□□□□ -0.84
PNKD-208ENST00000494954 FAM135AQ9P2D6 1515 aa9.81□□□□□ -0.84
PNKD-208ENST00000494954 NCKAP5LQ9HCH0 1330 aa9.81□□□□□ -0.84
PNKD-208ENST00000494954 KIDINS220Q9ULH0 1771 aa9.8□□□□□ -0.84
PNKD-208ENST00000494954 CLIP1P30622 1438 aa9.8□□□□□ -0.84
PNKD-208ENST00000494954 KIAA1107Q9UPP5 1409 aa9.79□□□□□ -0.84
PNKD-208ENST00000494954 NEURL4Q96JN8 1562 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms