RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 ARHGEF11O15085 1522 aa6.39□□□□□ -1.39
PRKD3-210ENST00000494667 ARID4BQ4LE39 1312 aaPredicted RBP6.38□□□□□ -1.39
PRKD3-210ENST00000494667 KIF27Q86VH2 1401 aa6.38□□□□□ -1.39
PRKD3-210ENST00000494667 KIF21AQ7Z4S6 1674 aa6.38□□□□□ -1.39
PRKD3-210ENST00000494667 CLCN1P35523 988 aa6.38□□□□□ -1.39
PRKD3-210ENST00000494667 DHX29Q7Z478 1369 aaKnown RBP6.38□□□□□ -1.39
PRKD3-210ENST00000494667 TCOF1Q13428 1488 aaKnown RBP6.37□□□□□ -1.39
PRKD3-210ENST00000494667 NAIPQ13075 1403 aa6.37□□□□□ -1.39
PRKD3-210ENST00000494667 CALD1Q05682 793 aaKnown RBP6.36□□□□□ -1.39
PRKD3-210ENST00000494667 TEX14Q8IWB6 1497 aa6.36□□□□□ -1.39
PRKD3-210ENST00000494667 FGD6Q6ZV73 1430 aa6.36□□□□□ -1.39
PRKD3-210ENST00000494667 CASKIN1Q8WXD9 1431 aa6.36□□□□□ -1.39
PRKD3-210ENST00000494667 MBD5Q9P267 1494 aa6.36□□□□□ -1.39
PRKD3-210ENST00000494667 FMN1Q68DA7 1419 aa6.35□□□□□ -1.39
PRKD3-210ENST00000494667 SCAPERQ9BY12 1400 aa6.35□□□□□ -1.39
PRKD3-210ENST00000494667 L1TD1Q5T7N2 865 aaKnown RBP6.35□□□□□ -1.39
PRKD3-210ENST00000494667 FGD5Q6ZNL6 1462 aa6.35□□□□□ -1.39
PRKD3-210ENST00000494667 PLEKHH2Q8IVE3 1493 aa6.35□□□□□ -1.39
PRKD3-210ENST00000494667 DCAF11Q8TEB1 546 aa6.35□□□□□ -1.39
PRKD3-210ENST00000494667 ZMYM3Q14202 1370 aa6.34□□□□□ -1.39
PRKD3-210ENST00000494667 KIF14Q15058 1648 aa6.34□□□□□ -1.39
PRKD3-210ENST00000494667 CCDC184Q52MB2 194 aa6.34□□□□□ -1.39
PRKD3-210ENST00000494667 RRAGDQ9NQL2 400 aaPredicted RBP6.34□□□□□ -1.39
PRKD3-210ENST00000494667 HSPA5P11021 654 aaKnown RBP6.34□□□□□ -1.4
PRKD3-210ENST00000494667 ATAD2BQ9ULI0 1458 aa6.33□□□□□ -1.4
PRKD3-210ENST00000494667 HSP90AA2PQ14568 343 aaPredicted RBP6.33□□□□□ -1.4
PRKD3-210ENST00000494667 VSIG10Q8N0Z9 540 aa6.33□□□□□ -1.4
PRKD3-210ENST00000494667 KDM5CP41229 1560 aa6.33□□□□□ -1.4
PRKD3-210ENST00000494667 ROCK2O75116 1388 aaKnown RBP6.33□□□□□ -1.4
PRKD3-210ENST00000494667 GAPVD1Q14C86 1478 aa6.33□□□□□ -1.4
PRKD3-210ENST00000494667 RPRD2Q5VT52 1461 aaKnown RBP6.33□□□□□ -1.4
PRKD3-210ENST00000494667 FSD2A1L4K1 749 aa6.33□□□□□ -1.4
PRKD3-210ENST00000494667 TERF1P54274 439 aa6.33□□□□□ -1.4
PRKD3-210ENST00000494667 RRP1P56182 461 aaKnown RBP6.33□□□□□ -1.4
PRKD3-210ENST00000494667 PDE3BQ13370 1112 aa6.33□□□□□ -1.4
PRKD3-210ENST00000494667 LAS1LQ9Y4W2 734 aaKnown RBP6.33□□□□□ -1.4
PRKD3-210ENST00000494667 BICRAQ9NZM4 1560 aa6.32□□□□□ -1.4
PRKD3-210ENST00000494667 TPM2P07951 284 aa6.32□□□□□ -1.4
PRKD3-210ENST00000494667 EIF4G2P78344 907 aaKnown RBP eCLIP6.32□□□□□ -1.4
PRKD3-210ENST00000494667 PRDM4Q9UKN5 801 aa6.32□□□□□ -1.4
PRKD3-210ENST00000494667 ISY1Q9ULR0 285 aaKnown RBP6.32□□□□□ -1.4
PRKD3-210ENST00000494667 BCORL1Q5H9F3 1711 aa6.32□□□□□ -1.4
PRKD3-210ENST00000494667 SUPT6HQ7KZ85 1726 aaKnown RBP6.32□□□□□ -1.4
PRKD3-210ENST00000494667 LRRIQ1Q96JM4 1722 aa6.32□□□□□ -1.4
PRKD3-210ENST00000494667 KDM2BQ8NHM5 1336 aa6.32□□□□□ -1.4
PRKD3-210ENST00000494667 SNAPC4Q5SXM2 1469 aa6.32□□□□□ -1.4
PRKD3-210ENST00000494667 PTPRKQ15262 1439 aa6.32□□□□□ -1.4
PRKD3-210ENST00000494667 HSP90AA1P07900 732 aaKnown RBP6.31□□□□□ -1.4
PRKD3-210ENST00000494667 PDCL3Q9H2J4 239 aa6.31□□□□□ -1.4
PRKD3-210ENST00000494667 MRS2Q9HD23 443 aa6.31□□□□□ -1.4
PRKD3-210ENST00000494667 CLASP1Q7Z460 1538 aa6.31□□□□□ -1.4
PRKD3-210ENST00000494667 BRD4O60885 1362 aaPredicted RBP6.31□□□□□ -1.4
PRKD3-210ENST00000494667 EHBP1L1Q8N3D4 1523 aa6.31□□□□□ -1.4
PRKD3-210ENST00000494667 UGGT2Q9NYU1 1516 aa6.31□□□□□ -1.4
PRKD3-210ENST00000494667 HMGXB3Q12766 1538 aa6.3□□□□□ -1.4
PRKD3-210ENST00000494667 SAMD9Q5K651 1589 aa6.3□□□□□ -1.4
PRKD3-210ENST00000494667 AAMPQ13685 434 aa6.3□□□□□ -1.4
PRKD3-210ENST00000494667 PLEKHG5O94827 1062 aa6.3□□□□□ -1.4
PRKD3-210ENST00000494667 BLMP54132 1417 aaPredicted RBP6.3□□□□□ -1.4
PRKD3-210ENST00000494667 NLRP1Q9C000 1473 aa6.29□□□□□ -1.4
PRKD3-210ENST00000494667 CC2D2AQ9P2K1 1620 aa6.29□□□□□ -1.4
PRKD3-210ENST00000494667 PNISRQ8TF01 805 aaKnown RBP6.29□□□□□ -1.4
PRKD3-210ENST00000494667 FGD1P98174 961 aa6.29□□□□□ -1.4
PRKD3-210ENST00000494667 KIF7Q2M1P5 1343 aa6.28□□□□□ -1.4
PRKD3-210ENST00000494667 CUL7Q14999 1698 aa6.28□□□□□ -1.4
PRKD3-210ENST00000494667 UHRF1BP1Q6BDS2 1440 aa6.28□□□□□ -1.4
PRKD3-210ENST00000494667 MAP7D2Q96T17 732 aa6.28□□□□□ -1.4
PRKD3-210ENST00000494667 PNNQ9H307 717 aaKnown RBP6.28□□□□□ -1.4
PRKD3-210ENST00000494667 LAMC1P11047 1609 aa6.27□□□□□ -1.41
PRKD3-210ENST00000494667 HIRIP3Q9BW71 556 aaPredicted RBP6.27□□□□□ -1.41
PRKD3-210ENST00000494667 FAM161AQ3B820 660 aa6.27□□□□□ -1.41
PRKD3-210ENST00000494667 C8orf34Q49A92 452 aa6.27□□□□□ -1.41
PRKD3-210ENST00000494667 PHF23Q9BUL5 403 aaPredicted RBP6.27□□□□□ -1.41
PRKD3-210ENST00000494667 GRIN2BQ13224 1484 aa6.26□□□□□ -1.41
PRKD3-210ENST00000494667 ARHGEF12Q9NZN5 1544 aa6.26□□□□□ -1.41
PRKD3-210ENST00000494667 IGF1RP08069 1367 aa6.26□□□□□ -1.41
PRKD3-210ENST00000494667 ROCK1Q13464 1354 aa6.26□□□□□ -1.41
PRKD3-210ENST00000494667 ANKRD30BQ9BXX2 1392 aa6.26□□□□□ -1.41
PRKD3-210ENST00000494667 SHROOM2Q13796 1616 aa6.26□□□□□ -1.41
PRKD3-210ENST00000494667 ARHGAP31Q2M1Z3 1444 aa6.26□□□□□ -1.41
PRKD3-210ENST00000494667 FRAT2O75474 233 aaPredicted RBP6.26□□□□□ -1.41
PRKD3-210ENST00000494667 FAM9BQ8IZU0 186 aa6.26□□□□□ -1.41
PRKD3-210ENST00000494667 KDM6BO15054 1643 aa6.25□□□□□ -1.41
PRKD3-210ENST00000494667 RALGAPBQ86X10 1494 aa6.25□□□□□ -1.41
PRKD3-210ENST00000494667 CENPQQ7L2Z9 268 aaPredicted RBP6.25□□□□□ -1.41
PRKD3-210ENST00000494667 SMAP1Q8IYB5 467 aaPredicted RBP6.25□□□□□ -1.41
PRKD3-210ENST00000494667 ANTXR1Q9H6X2 564 aa6.25□□□□□ -1.41
PRKD3-210ENST00000494667 UTP14CQ5TAP6 766 aaKnown RBP6.25□□□□□ -1.41
PRKD3-210ENST00000494667 EXOC6Q8TAG9 804 aa6.25□□□□□ -1.41
PRKD3-210ENST00000494667 ZNF608Q9ULD9 1512 aaPredicted RBP6.25□□□□□ -1.41
PRKD3-210ENST00000494667 RBM10P98175 930 aaKnown RBP6.25□□□□□ -1.41
PRKD3-210ENST00000494667 KIF15Q9NS87 1388 aa6.25□□□□□ -1.41
PRKD3-210ENST00000494667 CFTRP13569 1480 aa6.25□□□□□ -1.41
PRKD3-210ENST00000494667 PLXNC1O60486 1568 aa6.25□□□□□ -1.41
PRKD3-210ENST00000494667 RCAN3Q9UKA8 241 aa6.24□□□□□ -1.41
PRKD3-210ENST00000494667 EIF3AQ14152 1382 aaKnown RBP6.24□□□□□ -1.41
PRKD3-210ENST00000494667 USP19O94966 1318 aa6.23□□□□□ -1.41
PRKD3-210ENST00000494667 MTERF4Q7Z6M4 381 aaKnown RBP6.23□□□□□ -1.41
PRKD3-210ENST00000494667 PARD3Q8TEW0 1356 aa6.23□□□□□ -1.41
PRKD3-210ENST00000494667 XRCC6P12956 609 aaKnown RBP eCLIP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms