RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 TRIM35Q9UPQ4 493 aa14.42□□□□□ -0.1
RIF1-211ENST00000494333 PAXIP1Q6ZW49 1069 aaPredicted RBP14.41□□□□□ -0.1
RIF1-211ENST00000494333 IFT140Q96RY7 1462 aa14.41□□□□□ -0.1
RIF1-211ENST00000494333 PLCB2Q00722 1185 aa14.4□□□□□ -0.1
RIF1-211ENST00000494333 CFAP44Q96MT7 982 aa14.39□□□□□ -0.11
RIF1-211ENST00000494333 ZNF608Q9ULD9 1512 aaPredicted RBP14.38□□□□□ -0.11
RIF1-211ENST00000494333 SPRYD3Q8NCJ5 442 aa14.38□□□□□ -0.11
RIF1-211ENST00000494333 DNMBPQ6XZF7 1577 aa14.37□□□□□ -0.11
RIF1-211ENST00000494333 SOX12O15370 315 aa14.36□□□□□ -0.11
RIF1-211ENST00000494333 GTPBP6O43824 516 aaPredicted RBP14.36□□□□□ -0.11
RIF1-211ENST00000494333 MKRN3Q13064 507 aaKnown RBP14.36□□□□□ -0.11
RIF1-211ENST00000494333 MFRPQ9BY79 579 aa14.36□□□□□ -0.11
RIF1-211ENST00000494333 POTEIP0CG38 1075 aa14.35□□□□□ -0.11
RIF1-211ENST00000494333 PELP1Q8IZL8 1130 aaKnown RBP14.34□□□□□ -0.11
RIF1-211ENST00000494333 PHF8Q9UPP1 1060 aa14.33□□□□□ -0.12
RIF1-211ENST00000494333 POLA1P09884 1462 aaPredicted RBP14.31□□□□□ -0.12
RIF1-211ENST00000494333 SOGA1O94964 1423 aa14.31□□□□□ -0.12
RIF1-211ENST00000494333 AQRO60306 1485 aaKnown RBP eCLIP14.31□□□□□ -0.122e-9■■■■■ 54.3
RIF1-211ENST00000494333 NLRP6P59044 892 aa14.3□□□□□ -0.12
RIF1-211ENST00000494333 FBXO22Q8NEZ5 403 aa14.3□□□□□ -0.12
RIF1-211ENST00000494333 RYDENQ9NUL5 291 aaKnown RBP14.3□□□□□ -0.12
RIF1-211ENST00000494333 RAD54L2Q9Y4B4 1467 aa14.29□□□□□ -0.12
RIF1-211ENST00000494333 TDRD9Q8NDG6 1382 aaKnown RBP14.27□□□□□ -0.12
RIF1-211ENST00000494333 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.26□□□□□ -0.133e-8■■■□□ 18.3
RIF1-211ENST00000494333 TARBP1Q13395 1621 aaKnown RBP14.26□□□□□ -0.13
RIF1-211ENST00000494333 CUX1P39880 1505 aa14.25□□□□□ -0.13
RIF1-211ENST00000494333 FGD5Q6ZNL6 1462 aa14.25□□□□□ -0.13
RIF1-211ENST00000494333 IER5LQ5T953 404 aa14.25□□□□□ -0.13
RIF1-211ENST00000494333 MS4A4AQ96JQ5 239 aa14.24□□□□□ -0.13
RIF1-211ENST00000494333 EIF4G3O43432 1585 aaKnown RBP14.23□□□□□ -0.13
RIF1-211ENST00000494333 ILDR1Q86SU0 546 aaPredicted RBP14.23□□□□□ -0.13
RIF1-211ENST00000494333 IRX5P78411 483 aaPredicted RBP14.22□□□□□ -0.13
RIF1-211ENST00000494333 SLC39A7Q92504 469 aa14.21□□□□□ -0.13
RIF1-211ENST00000494333 HAP1P54257 671 aaPredicted RBP14.2□□□□□ -0.14
RIF1-211ENST00000494333 PPP1R37O75864 691 aa14.19□□□□□ -0.14
RIF1-211ENST00000494333 SLC24A1O60721 1099 aa14.18□□□□□ -0.14
RIF1-211ENST00000494333 C7P10643 843 aa14.18□□□□□ -0.14
RIF1-211ENST00000494333 PDCD7Q8N8D1 485 aaKnown RBP14.18□□□□□ -0.14
RIF1-211ENST00000494333 OCEL1Q9H607 264 aa14.18□□□□□ -0.14
RIF1-211ENST00000494333 METRNQ9UJH8 293 aa14.17□□□□□ -0.14
RIF1-211ENST00000494333 COLQQ9Y215 455 aaPredicted RBP14.16□□□□□ -0.14
RIF1-211ENST00000494333 SEC24BO95487 1268 aa14.15□□□□□ -0.14
RIF1-211ENST00000494333 CHMP7Q8WUX9 453 aaPredicted RBP14.15□□□□□ -0.14
RIF1-211ENST00000494333 POTEFA5A3E0 1075 aa14.14□□□□□ -0.15
RIF1-211ENST00000494333 PLCG2P16885 1265 aa14.14□□□□□ -0.15
RIF1-211ENST00000494333 DPY19L2Q6NUT2 758 aa14.14□□□□□ -0.15
RIF1-211ENST00000494333 TSHZ2Q9NRE2 1034 aa14.14□□□□□ -0.15
RIF1-211ENST00000494333 WRNQ14191 1432 aaPredicted RBP eCLIP14.12□□□□□ -0.15
RIF1-211ENST00000494333 GRIN2BQ13224 1484 aa14.12□□□□□ -0.15
RIF1-211ENST00000494333 SNAPC4Q5SXM2 1469 aa14.12□□□□□ -0.15
RIF1-211ENST00000494333 GAPVD1Q14C86 1478 aa14.1□□□□□ -0.15
RIF1-211ENST00000494333 WDR97A6NE52 1622 aa14.09□□□□□ -0.15
RIF1-211ENST00000494333 ABCA10Q8WWZ4 1543 aa14.09□□□□□ -0.15
RIF1-211ENST00000494333 MAGI1Q96QZ7 1491 aaPredicted RBP14.08□□□□□ -0.16
RIF1-211ENST00000494333 CYB5RLQ6IPT4 315 aa14.08□□□□□ -0.16
RIF1-211ENST00000494333 ARHGEF11O15085 1522 aa14.07□□□□□ -0.16
RIF1-211ENST00000494333 CHD1O14646 1710 aa14.07□□□□□ -0.16
RIF1-211ENST00000494333 RIMBP3CA6NJZ7 1639 aa14.06□□□□□ -0.16
RIF1-211ENST00000494333 RIMBP3BA6NNM3 1639 aa14.06□□□□□ -0.16
RIF1-211ENST00000494333 RIMBP3Q9UFD9 1639 aa14.06□□□□□ -0.16
RIF1-211ENST00000494333 TOP2BQ02880 1626 aa14.04□□□□□ -0.16
RIF1-211ENST00000494333 SYNJ2O15056 1496 aa14.04□□□□□ -0.16
RIF1-211ENST00000494333 SYNJ1O43426 1573 aa14.04□□□□□ -0.16
RIF1-211ENST00000494333 BIVM-ERCC5R4GMW8 1640 aa14.01□□□□□ -0.17
RIF1-211ENST00000494333 CADPS2Q86UW7 1296 aa14.01□□□□□ -0.17
RIF1-211ENST00000494333 MICALL2Q8IY33 904 aa14□□□□□ -0.17
RIF1-211ENST00000494333 L3MBTL3Q96JM7 780 aaPredicted RBP14□□□□□ -0.17
RIF1-211ENST00000494333 BOLA1Q9Y3E2 137 aa14□□□□□ -0.17
RIF1-211ENST00000494333 ABCA5Q8WWZ7 1642 aa14□□□□□ -0.17
RIF1-211ENST00000494333 TMEM121BQ9BXQ6 578 aaPredicted RBP13.98□□□□□ -0.17
RIF1-211ENST00000494333 VSIG10Q8N0Z9 540 aa13.97□□□□□ -0.17
RIF1-211ENST00000494333 PBRM1Q86U86 1689 aa13.97□□□□□ -0.17
RIF1-211ENST00000494333 G3V3G9 751 aa13.96□□□□□ -0.17
RIF1-211ENST00000494333 KDM2AQ9Y2K7 1162 aa13.96□□□□□ -0.17
RIF1-211ENST00000494333 CLASP1Q7Z460 1538 aa13.95□□□□□ -0.18
RIF1-211ENST00000494333 ARAP1Q96P48 1450 aa13.94□□□□□ -0.18
RIF1-211ENST00000494333 FHAD1B1AJZ9 1412 aa13.93□□□□□ -0.18
RIF1-211ENST00000494333 GRIN2AQ12879 1464 aa13.93□□□□□ -0.18
RIF1-211ENST00000494333 POTEB2H3BUK9 544 aa13.91□□□□□ -0.18
RIF1-211ENST00000494333 ERICH3Q5RHP9 1530 aa13.9□□□□□ -0.18
RIF1-211ENST00000494333 ADAMTS12P58397 1594 aa13.88□□□□□ -0.19
RIF1-211ENST00000494333 POTEJP0CG39 1038 aa13.88□□□□□ -0.19
RIF1-211ENST00000494333 NCKAP5LQ9HCH0 1330 aa13.88□□□□□ -0.19
RIF1-211ENST00000494333 NUP160Q12769 1436 aa13.87□□□□□ -0.19
RIF1-211ENST00000494333 IGF1RP08069 1367 aa13.85□□□□□ -0.19
RIF1-211ENST00000494333 KIF27Q86VH2 1401 aa13.85□□□□□ -0.19
RIF1-211ENST00000494333 CRISPLD2Q9H0B8 497 aa13.84□□□□□ -0.19
RIF1-211ENST00000494333 CEP170Q5SW79 1584 aa13.83□□□□□ -0.19
RIF1-211ENST00000494333 PDE4AP27815 886 aa13.83□□□□□ -0.2
RIF1-211ENST00000494333 C3orf67Q6ZVT6 689 aa13.83□□□□□ -0.2
RIF1-211ENST00000494333 JPH4Q96JJ6 628 aa13.82□□□□□ -0.2
RIF1-211ENST00000494333 LARP6Q9BRS8 491 aaKnown RBP13.82□□□□□ -0.2
RIF1-211ENST00000494333 TMEM92Q6UXU6 159 aa13.81□□□□□ -0.2
RIF1-211ENST00000494333 GPHNQ9NQX3 736 aaPredicted RBP13.8□□□□□ -0.2
RIF1-211ENST00000494333 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.79□□□□□ -0.2
RIF1-211ENST00000494333 TMC2Q8TDI7 906 aa13.78□□□□□ -0.2
RIF1-211ENST00000494333 ERCC6L2Q5T890 1561 aa13.78□□□□□ -0.2
RIF1-211ENST00000494333 C2orf72A6NCS6 295 aa13.77□□□□□ -0.21
RIF1-211ENST00000494333 PRG4Q92954 1404 aaPredicted RBP13.77□□□□□ -0.21
RIF1-211ENST00000494333 WDR70Q9NW82 654 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 187.7 ms