RNA–Protein interactions for RNA: ENST00000493590.1

NECAB3-214, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-214ENST00000493590 PREX1Q8TCU6 1659 aa28.29■■■□□ 2.12
NECAB3-214ENST00000493590 MAGI2Q86UL8 1455 aa28.27■■■□□ 2.12
NECAB3-214ENST00000493590 CEBPAP49715 358 aaPredicted RBP28.23■■■□□ 2.11
NECAB3-214ENST00000493590 SPATA31D1Q6ZQQ2 1576 aa28.2■■■□□ 2.11
NECAB3-214ENST00000493590 SCAPERQ9BY12 1400 aa28.2■■■□□ 2.11
NECAB3-214ENST00000493590 ARHGEF12Q9NZN5 1544 aa28.2■■■□□ 2.1
NECAB3-214ENST00000493590 STRCQ7RTU9 1775 aa28.19■■■□□ 2.1
NECAB3-214ENST00000493590 CSRNP3Q8WYN3 585 aa28.18■■■□□ 2.1
NECAB3-214ENST00000493590 ATP10AO60312 1499 aa28.16■■■□□ 2.1
NECAB3-214ENST00000493590 DMRT2Q9Y5R5 561 aa28.16■■■□□ 2.1
NECAB3-214ENST00000493590 C9orf84Q5VXU9 1444 aa28.16■■■□□ 2.1
NECAB3-214ENST00000493590 CDK13Q14004 1512 aaKnown RBP28.13■■■□□ 2.09
NECAB3-214ENST00000493590 UHRF1BP1Q6BDS2 1440 aa28.11■■■□□ 2.09
NECAB3-214ENST00000493590 PLCH2O75038 1416 aa28.1■■■□□ 2.09
NECAB3-214ENST00000493590 MYO5CQ9NQX4 1742 aa28.05■■■□□ 2.08
NECAB3-214ENST00000493590 MYT1LQ9UL68 1186 aa28.05■■■□□ 2.08
NECAB3-214ENST00000493590 EFCAB2Q5VUJ9 269 aa28.01■■■□□ 2.07
NECAB3-214ENST00000493590 ATP1B4Q9UN42 357 aaPredicted RBP28.01■■■□□ 2.07
NECAB3-214ENST00000493590 SETD1BQ9UPS6 1966 aaKnown RBP27.99■■■□□ 2.07
NECAB3-214ENST00000493590 PTPRTO14522 1441 aa27.98■■■□□ 2.07
NECAB3-214ENST00000493590 C3P01024 1663 aa27.97■■■□□ 2.07
NECAB3-214ENST00000493590 ZNF518AQ6AHZ1 1483 aa27.97■■■□□ 2.07
NECAB3-214ENST00000493590 AFAP1Q8N556 730 aa27.95■■■□□ 2.06
NECAB3-214ENST00000493590 DIP2CQ9Y2E4 1556 aa27.94■■■□□ 2.06
NECAB3-214ENST00000493590 ARHGAP5Q13017 1502 aa27.93■■■□□ 2.06
NECAB3-214ENST00000493590 KIF14Q15058 1648 aa27.93■■■□□ 2.06
NECAB3-214ENST00000493590 LTBP4Q8N2S1 1624 aa27.93■■■□□ 2.06
NECAB3-214ENST00000493590 KDM5CP41229 1560 aa27.92■■■□□ 2.06
NECAB3-214ENST00000493590 ESF1Q9H501 851 aaKnown RBP27.92■■■□□ 2.06
NECAB3-214ENST00000493590 ABCA6Q8N139 1617 aa27.89■■■□□ 2.05
NECAB3-214ENST00000493590 EEA1Q15075 1411 aa27.87■■■□□ 2.05
NECAB3-214ENST00000493590 IQSEC2Q5JU85 1478 aa27.85■■■□□ 2.05
NECAB3-214ENST00000493590 CDK11AQ9UQ88 783 aaPredicted RBP27.84■■■□□ 2.05
NECAB3-214ENST00000493590 REREQ9P2R6 1566 aa27.84■■■□□ 2.05
NECAB3-214ENST00000493590 NCOA1Q15788 1441 aa27.84■■■□□ 2.05
NECAB3-214ENST00000493590 TRAPPC8Q9Y2L5 1435 aa27.84■■■□□ 2.05
NECAB3-214ENST00000493590 EHMT2Q96KQ7 1210 aa27.81■■■□□ 2.04
NECAB3-214ENST00000493590 CAMSAP1Q5T5Y3 1602 aa27.78■■■□□ 2.04
NECAB3-214ENST00000493590 FMN1Q68DA7 1419 aa27.78■■■□□ 2.04
NECAB3-214ENST00000493590 CLIP1P30622 1438 aa27.77■■■□□ 2.04
NECAB3-214ENST00000493590 TROQ12816 1431 aaPredicted RBP27.77■■■□□ 2.04
NECAB3-214ENST00000493590 AGLP35573 1532 aa27.77■■■□□ 2.04
NECAB3-214ENST00000493590 MLH3Q9UHC1 1453 aa27.76■■■□□ 2.04
NECAB3-214ENST00000493590 CDC42BPBQ9Y5S2 1711 aa27.76■■■□□ 2.03
NECAB3-214ENST00000493590 UBAP1LF5GYI3 381 aa27.75■■■□□ 2.03
NECAB3-214ENST00000493590 ZNF335Q9H4Z2 1342 aaPredicted RBP27.72■■■□□ 2.03
NECAB3-214ENST00000493590 NCKAP5LQ9HCH0 1330 aa27.72■■■□□ 2.03
NECAB3-214ENST00000493590 CNTLNQ9NXG0 1405 aa27.72■■■□□ 2.03
NECAB3-214ENST00000493590 ITSN2Q9NZM3 1697 aa27.72■■■□□ 2.03
NECAB3-214ENST00000493590 ABCC1P33527 1531 aa27.71■■■□□ 2.03
NECAB3-214ENST00000493590 LRRIQ1Q96JM4 1722 aa27.7■■■□□ 2.02
NECAB3-214ENST00000493590 PREX2Q70Z35 1606 aa27.68■■■□□ 2.02
NECAB3-214ENST00000493590 UBTFP17480 764 aaKnown RBP27.68■■■□□ 2.02
NECAB3-214ENST00000493590 KIDINS220Q9ULH0 1771 aa27.68■■■□□ 2.02
NECAB3-214ENST00000493590 ARHGAP35Q9NRY4 1499 aa27.67■■■□□ 2.02
NECAB3-214ENST00000493590 MROH2AA6NES4 1674 aa27.65■■■□□ 2.02
NECAB3-214ENST00000493590 NPATQ14207 1427 aa27.64■■■□□ 2.02
NECAB3-214ENST00000493590 SUPT6HQ7KZ85 1726 aaKnown RBP27.64■■■□□ 2.01
NECAB3-214ENST00000493590 ZMYM3Q14202 1370 aa27.6■■■□□ 2.01
NECAB3-214ENST00000493590 SCAF1Q9H7N4 1312 aaKnown RBP27.6■■■□□ 2.01
NECAB3-214ENST00000493590 MYO3AQ8NEV4 1616 aa27.59■■■□□ 2.01
NECAB3-214ENST00000493590 CLTCQ00610 1675 aaKnown RBP27.59■■■□□ 2.01
NECAB3-214ENST00000493590 ZNF142P52746 1687 aaPredicted RBP27.56■■■□□ 2
NECAB3-214ENST00000493590 ZNF777Q9ULD5 760 aaPredicted RBP27.55■■■□□ 2
NECAB3-214ENST00000493590 SAMD9LQ8IVG5 1584 aa27.55■■■□□ 2
NECAB3-214ENST00000493590 CDC42BPAQ5VT25 1732 aa27.55■■■□□ 2
NECAB3-214ENST00000493590 PKD2Q13563 968 aa27.54■■■□□ 2
NECAB3-214ENST00000493590 CEP170BQ9Y4F5 1589 aaPredicted RBP27.54■■■□□ 2
NECAB3-214ENST00000493590 MED1Q15648 1581 aaPredicted RBP27.53■■■□□ 2
NECAB3-214ENST00000493590 PLA2R1Q13018 1463 aa27.53■■■□□ 2
NECAB3-214ENST00000493590 PIP4K2BP78356 416 aa27.51■■□□□ 1.99
NECAB3-214ENST00000493590 HSPA1LP34931 641 aa27.5■■□□□ 1.99
NECAB3-214ENST00000493590 PPP6R1Q9UPN7 881 aa27.5■■□□□ 1.99
NECAB3-214ENST00000493590 SYCP2Q9BX26 1530 aa27.5■■□□□ 1.99
NECAB3-214ENST00000493590 TCOF1Q13428 1488 aaKnown RBP27.5■■□□□ 1.99
NECAB3-214ENST00000493590 SPAG9O60271 1321 aaKnown RBP27.49■■□□□ 1.99
NECAB3-214ENST00000493590 CCDC18Q5T9S5 1454 aa27.46■■□□□ 1.99
NECAB3-214ENST00000493590 PTPRKQ15262 1439 aa27.46■■□□□ 1.99
NECAB3-214ENST00000493590 HNRNPMP52272 730 aaKnown RBP eCLIP27.44■■□□□ 1.985e-11■■■□□ 16.7
NECAB3-214ENST00000493590 GGT6Q6P531 493 aa27.44■■□□□ 1.98
NECAB3-214ENST00000493590 ATP7AQ04656 1500 aa27.44■■□□□ 1.98
NECAB3-214ENST00000493590 A2MP01023 1474 aa27.41■■□□□ 1.98
NECAB3-214ENST00000493590 PLXNC1O60486 1568 aa27.4■■□□□ 1.98
NECAB3-214ENST00000493590 PHF23Q9BUL5 403 aaPredicted RBP27.39■■□□□ 1.98
NECAB3-214ENST00000493590 CASKIN1Q8WXD9 1431 aa27.39■■□□□ 1.97
NECAB3-214ENST00000493590 TOM1O60784 492 aa27.38■■□□□ 1.97
NECAB3-214ENST00000493590 INO80Q9ULG1 1556 aaPredicted RBP27.38■■□□□ 1.97
NECAB3-214ENST00000493590 DNMT1P26358 1616 aaKnown RBP27.36■■□□□ 1.97
NECAB3-214ENST00000493590 A2ML1A8K2U0 1454 aa27.35■■□□□ 1.97
NECAB3-214ENST00000493590 POLR1AO95602 1720 aaPredicted RBP27.35■■□□□ 1.97
NECAB3-214ENST00000493590 CPS1P31327 1500 aa27.34■■□□□ 1.97
NECAB3-214ENST00000493590 GPATCH8Q9UKJ3 1502 aaKnown RBP27.33■■□□□ 1.97
NECAB3-214ENST00000493590 SENP3Q9H4L4 574 aaPredicted RBP27.31■■□□□ 1.96
NECAB3-214ENST00000493590 SHANK2Q9UPX8 1470 aa27.3■■□□□ 1.96
NECAB3-214ENST00000493590 NEURL4Q96JN8 1562 aa27.3■■□□□ 1.96
NECAB3-214ENST00000493590 ADGBQ8N7X0 1667 aa27.29■■□□□ 1.96
NECAB3-214ENST00000493590 CFDP1Q9UEE9 299 aaPredicted RBP27.28■■□□□ 1.96
NECAB3-214ENST00000493590 PLEKHH2Q8IVE3 1493 aa27.27■■□□□ 1.96
NECAB3-214ENST00000493590 KIAA1107Q9UPP5 1409 aa27.26■■□□□ 1.95
NECAB3-214ENST00000493590 FYCO1Q9BQS8 1478 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms