RNA–Protein interactions for RNA: ENST00000493306.1

KLF4-204, Transcript of Kruppel like factor 4, humanhuman

TSL 1 (best)

Gene KLF4, Length 2,706 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4-204ENST00000493306 GRIN2BQ13224 1484 aa22.22■■□□□ 1.15
KLF4-204ENST00000493306 RAD54L2Q9Y4B4 1467 aa22.2■■□□□ 1.15
KLF4-204ENST00000493306 TCOF1Q13428 1488 aaKnown RBP22.2■■□□□ 1.14
KLF4-204ENST00000493306 SAMD9Q5K651 1589 aa22.2■■□□□ 1.14
KLF4-204ENST00000493306 ANO8Q9HCE9 1232 aaPredicted RBP22.18■■□□□ 1.14
KLF4-204ENST00000493306 ARHGEF11O15085 1522 aa22.18■■□□□ 1.14
KLF4-204ENST00000493306 DNMBPQ6XZF7 1577 aa22.17■■□□□ 1.14
KLF4-204ENST00000493306 KDM6BO15054 1643 aa22.17■■□□□ 1.14
KLF4-204ENST00000493306 SPATA31E1Q6ZUB1 1445 aa22.16■■□□□ 1.14
KLF4-204ENST00000493306 FANCD2Q9BXW9 1451 aa22.16■■□□□ 1.14
KLF4-204ENST00000493306 NBPF8Q3BBV2 869 aa22.15■■□□□ 1.14
KLF4-204ENST00000493306 RPRD2Q5VT52 1461 aaKnown RBP22.15■■□□□ 1.14
KLF4-204ENST00000493306 POLA1P09884 1462 aaPredicted RBP22.14■■□□□ 1.13
KLF4-204ENST00000493306 FOXD1Q16676 465 aa22.14■■□□□ 1.13
KLF4-204ENST00000493306 TEX14Q8IWB6 1497 aa22.12■■□□□ 1.13
KLF4-204ENST00000493306 ANKRD30BQ9BXX2 1392 aa22.11■■□□□ 1.13
KLF4-204ENST00000493306 MAGI3Q5TCQ9 1506 aa22.09■■□□□ 1.13
KLF4-204ENST00000493306 DHX29Q7Z478 1369 aaKnown RBP22.08■■□□□ 1.13
KLF4-204ENST00000493306 MIA2Q96PC5 1412 aa22.08■■□□□ 1.13
KLF4-204ENST00000493306 TOPBP1Q92547 1522 aa22.08■■□□□ 1.13
KLF4-204ENST00000493306 KIF21AQ7Z4S6 1674 aa22.08■■□□□ 1.13
KLF4-204ENST00000493306 CNGB1Q14028 1251 aaPredicted RBP22.07■■□□□ 1.12
KLF4-204ENST00000493306 USP35Q9P2H5 1018 aa22.06■■□□□ 1.12
KLF4-204ENST00000493306 NPM2Q86SE8 214 aaKnown RBP22.05■■□□□ 1.12
KLF4-204ENST00000493306 TCERG1O14776 1098 aaKnown RBP22.04■■□□□ 1.12
KLF4-204ENST00000493306 IL27Q8NEV9 243 aa22.04■■□□□ 1.12
KLF4-204ENST00000493306 POLR3GLQ9BT43 218 aa22.02■■□□□ 1.12
KLF4-204ENST00000493306 SALL2Q9Y467 1007 aaPredicted RBP22.02■■□□□ 1.12
KLF4-204ENST00000493306 NEFMP07197 916 aa22.02■■□□□ 1.12
KLF4-204ENST00000493306 TMC1Q8TDI8 760 aa22.01■■□□□ 1.11
KLF4-204ENST00000493306 UBE2Q2Q8WVN8 375 aa22.01■■□□□ 1.11
KLF4-204ENST00000493306 PNISRQ8TF01 805 aaKnown RBP22■■□□□ 1.11
KLF4-204ENST00000493306 SLC4A1APQ9BWU0 796 aaKnown RBP22■■□□□ 1.11
KLF4-204ENST00000493306 ROCK1Q13464 1354 aa21.98■■□□□ 1.11
KLF4-204ENST00000493306 ARID4BQ4LE39 1312 aaPredicted RBP21.98■■□□□ 1.11
KLF4-204ENST00000493306 LAS1LQ9Y4W2 734 aaKnown RBP21.98■■□□□ 1.11
KLF4-204ENST00000493306 PPM1GO15355 546 aaPredicted RBP21.97■■□□□ 1.11
KLF4-204ENST00000493306 USP47Q96K76 1375 aa21.97■■□□□ 1.11
KLF4-204ENST00000493306 RRP1P56182 461 aaKnown RBP21.97■■□□□ 1.11
KLF4-204ENST00000493306 PDE4AP27815 886 aa21.96■■□□□ 1.11
KLF4-204ENST00000493306 SENP3-EIF4A1A0A087X0R7 540 aa21.95■■□□□ 1.1
KLF4-204ENST00000493306 RTN4Q9NQC3 1192 aaKnown RBP21.95■■□□□ 1.1
KLF4-204ENST00000493306 ROCK2O75116 1388 aaKnown RBP21.94■■□□□ 1.1
KLF4-204ENST00000493306 MS4A1P11836 297 aa21.94■■□□□ 1.1
KLF4-204ENST00000493306 BCORL1Q5H9F3 1711 aa21.94■■□□□ 1.1
KLF4-204ENST00000493306 EPRSP07814 1512 aaKnown RBP21.93■■□□□ 1.1
KLF4-204ENST00000493306 DAPK1P53355 1430 aa21.93■■□□□ 1.1
KLF4-204ENST00000493306 EXOC6Q8TAG9 804 aa21.93■■□□□ 1.1
KLF4-204ENST00000493306 NESP48681 1621 aa21.92■■□□□ 1.1
KLF4-204ENST00000493306 BACH2Q9BYV9 841 aa21.92■■□□□ 1.1
KLF4-204ENST00000493306 LRPPRCP42704 1394 aaKnown RBP21.9■■□□□ 1.1
KLF4-204ENST00000493306 WASHC2CQ9Y4E1 1318 aa21.89■■□□□ 1.1
KLF4-204ENST00000493306 RCAN3Q9UKA8 241 aa21.89■■□□□ 1.1
KLF4-204ENST00000493306 KIF15Q9NS87 1388 aa21.89■■□□□ 1.09
KLF4-204ENST00000493306 GAPVD1Q14C86 1478 aa21.88■■□□□ 1.09
KLF4-204ENST00000493306 MBD5Q9P267 1494 aa21.88■■□□□ 1.09
KLF4-204ENST00000493306 TDRD9Q8NDG6 1382 aaKnown RBP21.88■■□□□ 1.09
KLF4-204ENST00000493306 ZNF326Q5BKZ1 582 aaKnown RBP21.88■■□□□ 1.09
KLF4-204ENST00000493306 BRD4O60885 1362 aaPredicted RBP21.88■■□□□ 1.09
KLF4-204ENST00000493306 DNMT1P26358 1616 aaKnown RBP21.87■■□□□ 1.09
KLF4-204ENST00000493306 KIF14Q15058 1648 aa21.87■■□□□ 1.09
KLF4-204ENST00000493306 KDM5CP41229 1560 aa21.87■■□□□ 1.09
KLF4-204ENST00000493306 CDK13Q14004 1512 aaKnown RBP21.86■■□□□ 1.09
KLF4-204ENST00000493306 DDRGK1Q96HY6 314 aa21.86■■□□□ 1.09
KLF4-204ENST00000493306 ABCC5O15440 1437 aa21.85■■□□□ 1.09
KLF4-204ENST00000493306 KTN1Q86UP2 1357 aaKnown RBP21.85■■□□□ 1.09
KLF4-204ENST00000493306 MYBBP1AQ9BQG0 1328 aaKnown RBP21.85■■□□□ 1.09
KLF4-204ENST00000493306 LAMC3Q9Y6N6 1575 aa21.84■■□□□ 1.09
KLF4-204ENST00000493306 RALBP1Q15311 655 aa21.82■■□□□ 1.08
KLF4-204ENST00000493306 PDE3BQ13370 1112 aa21.82■■□□□ 1.08
KLF4-204ENST00000493306 PZPP20742 1482 aa21.81■■□□□ 1.08
KLF4-204ENST00000493306 KIAA1107Q9UPP5 1409 aa21.79■■□□□ 1.08
KLF4-204ENST00000493306 WDR62O43379 1518 aa21.78■■□□□ 1.08
KLF4-204ENST00000493306 ARID3CA6NKF2 412 aa21.78■■□□□ 1.08
KLF4-204ENST00000493306 GSE1Q14687 1217 aa21.77■■□□□ 1.07
KLF4-204ENST00000493306 URB2Q14146 1524 aaKnown RBP21.77■■□□□ 1.07
KLF4-204ENST00000493306 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.76■■□□□ 1.07
KLF4-204ENST00000493306 RALGAPBQ86X10 1494 aa21.76■■□□□ 1.07
KLF4-204ENST00000493306 CARD11Q9BXL7 1154 aa21.75■■□□□ 1.07
KLF4-204ENST00000493306 ZNF644Q9H582 1327 aaPredicted RBP21.74■■□□□ 1.07
KLF4-204ENST00000493306 IQGAP2Q13576 1575 aa21.74■■□□□ 1.07
KLF4-204ENST00000493306 UHRF1BP1Q6BDS2 1440 aa21.73■■□□□ 1.07
KLF4-204ENST00000493306 DAXXQ9UER7 740 aaPredicted RBP21.72■■□□□ 1.07
KLF4-204ENST00000493306 NLRP13Q86W25 1043 aa21.71■■□□□ 1.07
KLF4-204ENST00000493306 PKD2Q13563 968 aa21.71■■□□□ 1.07
KLF4-204ENST00000493306 BRPF3Q9ULD4 1205 aa21.71■■□□□ 1.07
KLF4-204ENST00000493306 NFKBIBQ15653 356 aa21.7■■□□□ 1.06
KLF4-204ENST00000493306 ADGBQ8N7X0 1667 aa21.67■■□□□ 1.06
KLF4-204ENST00000493306 ST20-MTHFSA0A0A6YYL1 179 aa21.67■■□□□ 1.06
KLF4-204ENST00000493306 E9PCH4 1651 aa21.66■■□□□ 1.06
KLF4-204ENST00000493306 ARHGEF12Q9NZN5 1544 aa21.65■■□□□ 1.06
KLF4-204ENST00000493306 CDCA7LQ96GN5 454 aa21.64■■□□□ 1.06
KLF4-204ENST00000493306 CRBNQ96SW2 442 aa21.64■■□□□ 1.06
KLF4-204ENST00000493306 PLIN1O60240 522 aa21.64■■□□□ 1.05
KLF4-204ENST00000493306 PARD3Q8TEW0 1356 aa21.63■■□□□ 1.05
KLF4-204ENST00000493306 CAMSAP2Q08AD1 1489 aa21.62■■□□□ 1.05
KLF4-204ENST00000493306 FRAT1Q92837 279 aaPredicted RBP21.62■■□□□ 1.05
KLF4-204ENST00000493306 EIF5BO60841 1220 aaKnown RBP21.61■■□□□ 1.05
KLF4-204ENST00000493306 SKAP1Q86WV1 359 aa21.6■■□□□ 1.05
KLF4-204ENST00000493306 ADGRL2O95490 1459 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms