RNA–Protein interactions for RNA: ENST00000493259.5

CPA4-210, Transcript of carboxypeptidase A4, humanhuman

TSL 2 BASIC

Gene CPA4, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-210ENST00000493259 CDK13Q14004 1512 aaKnown RBP18.37■□□□□ 0.53
CPA4-210ENST00000493259 PLCH2O75038 1416 aa18.35■□□□□ 0.53
CPA4-210ENST00000493259 ARHGEF12Q9NZN5 1544 aa18.35■□□□□ 0.53
CPA4-210ENST00000493259 ATP10AO60312 1499 aa18.33■□□□□ 0.52
CPA4-210ENST00000493259 EEA1Q15075 1411 aa18.33■□□□□ 0.52
CPA4-210ENST00000493259 PREX1Q8TCU6 1659 aa18.32■□□□□ 0.52
CPA4-210ENST00000493259 C9orf84Q5VXU9 1444 aa18.32■□□□□ 0.52
CPA4-210ENST00000493259 CEBPAP49715 358 aaPredicted RBP18.32■□□□□ 0.52
CPA4-210ENST00000493259 DISP3Q9P2K9 1392 aa18.28■□□□□ 0.52
CPA4-210ENST00000493259 EFCAB2Q5VUJ9 269 aa18.27■□□□□ 0.51
CPA4-210ENST00000493259 ILDR2Q71H61 639 aa18.27■□□□□ 0.51
CPA4-210ENST00000493259 STRCQ7RTU9 1775 aa18.26■□□□□ 0.51
CPA4-210ENST00000493259 MYO5CQ9NQX4 1742 aa18.26■□□□□ 0.51
CPA4-210ENST00000493259 ATP1B4Q9UN42 357 aaPredicted RBP18.26■□□□□ 0.51
CPA4-210ENST00000493259 DMRT2Q9Y5R5 561 aa18.25■□□□□ 0.51
CPA4-210ENST00000493259 UHRF1BP1Q6BDS2 1440 aa18.24■□□□□ 0.51
CPA4-210ENST00000493259 ZNF518AQ6AHZ1 1483 aa18.23■□□□□ 0.51
CPA4-210ENST00000493259 AFAP1Q8N556 730 aa18.23■□□□□ 0.51
CPA4-210ENST00000493259 KIF14Q15058 1648 aa18.22■□□□□ 0.51
CPA4-210ENST00000493259 MYT1LQ9UL68 1186 aa18.21■□□□□ 0.51
CPA4-210ENST00000493259 KDM5CP41229 1560 aa18.21■□□□□ 0.51
CPA4-210ENST00000493259 ARHGAP5Q13017 1502 aa18.2■□□□□ 0.5
CPA4-210ENST00000493259 SOCS7O14512 581 aa18.2■□□□□ 0.5
CPA4-210ENST00000493259 CDK11AQ9UQ88 783 aaPredicted RBP18.2■□□□□ 0.5
CPA4-210ENST00000493259 FMN1Q68DA7 1419 aa18.19■□□□□ 0.5
CPA4-210ENST00000493259 DIP2CQ9Y2E4 1556 aa18.19■□□□□ 0.5
CPA4-210ENST00000493259 EHMT2Q96KQ7 1210 aa18.18■□□□□ 0.5
CPA4-210ENST00000493259 TROQ12816 1431 aaPredicted RBP18.16■□□□□ 0.5
CPA4-210ENST00000493259 C3P01024 1663 aa18.16■□□□□ 0.5
CPA4-210ENST00000493259 REREQ9P2R6 1566 aa18.15■□□□□ 0.5
CPA4-210ENST00000493259 ABCA6Q8N139 1617 aa18.15■□□□□ 0.5
CPA4-210ENST00000493259 PTPRTO14522 1441 aa18.15■□□□□ 0.5
CPA4-210ENST00000493259 ARHGAP35Q9NRY4 1499 aa18.15■□□□□ 0.5
CPA4-210ENST00000493259 UBTFP17480 764 aaKnown RBP18.14■□□□□ 0.49
CPA4-210ENST00000493259 CLIP1P30622 1438 aa18.14■□□□□ 0.49
CPA4-210ENST00000493259 SPATA31D1Q6ZQQ2 1576 aa18.14■□□□□ 0.49
CPA4-210ENST00000493259 SETD1BQ9UPS6 1966 aaKnown RBP18.14■□□□□ 0.49
CPA4-210ENST00000493259 MLH3Q9UHC1 1453 aa18.13■□□□□ 0.49
CPA4-210ENST00000493259 ESF1Q9H501 851 aaKnown RBP18.12■□□□□ 0.49
CPA4-210ENST00000493259 CDC42BPBQ9Y5S2 1711 aa18.11■□□□□ 0.49
CPA4-210ENST00000493259 LTBP4Q8N2S1 1624 aa18.11■□□□□ 0.49
CPA4-210ENST00000493259 TRAPPC8Q9Y2L5 1435 aa18.1■□□□□ 0.49
CPA4-210ENST00000493259 AGLP35573 1532 aa18.1■□□□□ 0.49
CPA4-210ENST00000493259 LRRIQ1Q96JM4 1722 aa18.09■□□□□ 0.49
CPA4-210ENST00000493259 ABCC1P33527 1531 aa18.08■□□□□ 0.49
CPA4-210ENST00000493259 NCOA1Q15788 1441 aa18.07■□□□□ 0.48
CPA4-210ENST00000493259 PREX2Q70Z35 1606 aa18.07■□□□□ 0.48
CPA4-210ENST00000493259 ITSN2Q9NZM3 1697 aa18.05■□□□□ 0.48
CPA4-210ENST00000493259 IQSEC2Q5JU85 1478 aa18.05■□□□□ 0.48
CPA4-210ENST00000493259 CNTLNQ9NXG0 1405 aa18.04■□□□□ 0.48
CPA4-210ENST00000493259 KIDINS220Q9ULH0 1771 aa18.04■□□□□ 0.48
CPA4-210ENST00000493259 CAMSAP1Q5T5Y3 1602 aa18.02■□□□□ 0.48
CPA4-210ENST00000493259 NPATQ14207 1427 aa17.99■□□□□ 0.47
CPA4-210ENST00000493259 NCKAP5LQ9HCH0 1330 aa17.98■□□□□ 0.47
CPA4-210ENST00000493259 CCDC18Q5T9S5 1454 aa17.98■□□□□ 0.47
CPA4-210ENST00000493259 MROH2AA6NES4 1674 aa17.98■□□□□ 0.47
CPA4-210ENST00000493259 ZMYM3Q14202 1370 aa17.98■□□□□ 0.47
CPA4-210ENST00000493259 CDC42BPAQ5VT25 1732 aa17.98■□□□□ 0.47
CPA4-210ENST00000493259 SAMD9LQ8IVG5 1584 aa17.97■□□□□ 0.47
CPA4-210ENST00000493259 ZNF777Q9ULD5 760 aaPredicted RBP17.97■□□□□ 0.47
CPA4-210ENST00000493259 ZNF335Q9H4Z2 1342 aaPredicted RBP17.96■□□□□ 0.47
CPA4-210ENST00000493259 CASKIN1Q8WXD9 1431 aa17.96■□□□□ 0.47
CPA4-210ENST00000493259 UBAP1LF5GYI3 381 aa17.94■□□□□ 0.46
CPA4-210ENST00000493259 SUPT6HQ7KZ85 1726 aaKnown RBP17.94■□□□□ 0.46
CPA4-210ENST00000493259 SYCP2Q9BX26 1530 aa17.94■□□□□ 0.46
CPA4-210ENST00000493259 SPAG9O60271 1321 aaKnown RBP17.93■□□□□ 0.46
CPA4-210ENST00000493259 MYO3AQ8NEV4 1616 aa17.92■□□□□ 0.46
CPA4-210ENST00000493259 CLTCQ00610 1675 aaKnown RBP17.92■□□□□ 0.46
CPA4-210ENST00000493259 HNRNPMP52272 730 aaKnown RBP eCLIP17.92■□□□□ 0.46
CPA4-210ENST00000493259 ZNF142P52746 1687 aaPredicted RBP17.9■□□□□ 0.46
CPA4-210ENST00000493259 PLA2R1Q13018 1463 aa17.9■□□□□ 0.46
CPA4-210ENST00000493259 GPATCH8Q9UKJ3 1502 aaKnown RBP17.89■□□□□ 0.46
CPA4-210ENST00000493259 PKD2Q13563 968 aa17.89■□□□□ 0.45
CPA4-210ENST00000493259 PLXNC1O60486 1568 aa17.89■□□□□ 0.45
CPA4-210ENST00000493259 CEP170BQ9Y4F5 1589 aaPredicted RBP17.89■□□□□ 0.45
CPA4-210ENST00000493259 ATP7AQ04656 1500 aa17.89■□□□□ 0.45
CPA4-210ENST00000493259 PTPRKQ15262 1439 aa17.89■□□□□ 0.45
CPA4-210ENST00000493259 TCOF1Q13428 1488 aaKnown RBP17.88■□□□□ 0.45
CPA4-210ENST00000493259 A2MP01023 1474 aa17.87■□□□□ 0.45
CPA4-210ENST00000493259 GGT6Q6P531 493 aa17.87■□□□□ 0.45
CPA4-210ENST00000493259 FYCO1Q9BQS8 1478 aa17.87■□□□□ 0.45
CPA4-210ENST00000493259 INO80Q9ULG1 1556 aaPredicted RBP17.86■□□□□ 0.45
CPA4-210ENST00000493259 PPP6R1Q9UPN7 881 aa17.85■□□□□ 0.45
CPA4-210ENST00000493259 KIAA1107Q9UPP5 1409 aa17.84■□□□□ 0.45
CPA4-210ENST00000493259 CFDP1Q9UEE9 299 aaPredicted RBP17.83■□□□□ 0.45
CPA4-210ENST00000493259 PLEKHH2Q8IVE3 1493 aa17.82■□□□□ 0.44
CPA4-210ENST00000493259 CHIC1Q5VXU3 224 aa17.81■□□□□ 0.44
CPA4-210ENST00000493259 SCAF1Q9H7N4 1312 aaKnown RBP17.8■□□□□ 0.44
CPA4-210ENST00000493259 CCNB3Q8WWL7 1395 aa17.79■□□□□ 0.44
CPA4-210ENST00000493259 DNMT1P26358 1616 aaKnown RBP17.79■□□□□ 0.44
CPA4-210ENST00000493259 A2ML1A8K2U0 1454 aa17.79■□□□□ 0.44
CPA4-210ENST00000493259 HSPA1LP34931 641 aa17.78■□□□□ 0.44
CPA4-210ENST00000493259 PIP4K2BP78356 416 aa17.78■□□□□ 0.44
CPA4-210ENST00000493259 ADGBQ8N7X0 1667 aa17.77■□□□□ 0.44
CPA4-210ENST00000493259 MED1Q15648 1581 aaPredicted RBP17.77■□□□□ 0.43
CPA4-210ENST00000493259 ZNF644Q9H582 1327 aaPredicted RBP17.75■□□□□ 0.43
CPA4-210ENST00000493259 NEURL4Q96JN8 1562 aa17.74■□□□□ 0.43
CPA4-210ENST00000493259 POLR1AO95602 1720 aaPredicted RBP17.74■□□□□ 0.43
CPA4-210ENST00000493259 CPS1P31327 1500 aa17.73■□□□□ 0.43
CPA4-210ENST00000493259 TOM1O60784 492 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms