RNA–Protein interactions for RNA: ENST00000491574.2

SMARCA2-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-217ENST00000491574 MAGI2Q86UL8 1455 aa16.76■□□□□ 0.27
SMARCA2-217ENST00000491574 ATP1B4Q9UN42 357 aaPredicted RBP16.76■□□□□ 0.27
SMARCA2-217ENST00000491574 CFAP74Q9C0B2 1584 aa16.76■□□□□ 0.27
SMARCA2-217ENST00000491574 CDK13Q14004 1512 aaKnown RBP16.75■□□□□ 0.27
SMARCA2-217ENST00000491574 FER1L4A9Z1Z3 1794 aa16.75■□□□□ 0.27
SMARCA2-217ENST00000491574 SOCS7O14512 581 aa16.74■□□□□ 0.27
SMARCA2-217ENST00000491574 ATP10AO60312 1499 aa16.73■□□□□ 0.27
SMARCA2-217ENST00000491574 PLCH2O75038 1416 aa16.73■□□□□ 0.27
SMARCA2-217ENST00000491574 EHMT2Q96KQ7 1210 aa16.73■□□□□ 0.27
SMARCA2-217ENST00000491574 ARHGEF12Q9NZN5 1544 aa16.72■□□□□ 0.27
SMARCA2-217ENST00000491574 AFAP1Q8N556 730 aa16.71■□□□□ 0.27
SMARCA2-217ENST00000491574 EFCAB2Q5VUJ9 269 aa16.7■□□□□ 0.26
SMARCA2-217ENST00000491574 MYT1LQ9UL68 1186 aa16.7■□□□□ 0.26
SMARCA2-217ENST00000491574 C9orf84Q5VXU9 1444 aa16.7■□□□□ 0.26
SMARCA2-217ENST00000491574 DMRT2Q9Y5R5 561 aa16.69■□□□□ 0.26
SMARCA2-217ENST00000491574 STRCQ7RTU9 1775 aa16.68■□□□□ 0.26
SMARCA2-217ENST00000491574 PREX1Q8TCU6 1659 aa16.67■□□□□ 0.26
SMARCA2-217ENST00000491574 UHRF1BP1Q6BDS2 1440 aa16.65■□□□□ 0.26
SMARCA2-217ENST00000491574 EEA1Q15075 1411 aa16.61■□□□□ 0.25
SMARCA2-217ENST00000491574 ZNF518AQ6AHZ1 1483 aa16.6■□□□□ 0.25
SMARCA2-217ENST00000491574 KIF14Q15058 1648 aa16.59■□□□□ 0.25
SMARCA2-217ENST00000491574 CDK11AQ9UQ88 783 aaPredicted RBP16.59■□□□□ 0.25
SMARCA2-217ENST00000491574 ARHGAP5Q13017 1502 aa16.59■□□□□ 0.25
SMARCA2-217ENST00000491574 UBTFP17480 764 aaKnown RBP16.58■□□□□ 0.24
SMARCA2-217ENST00000491574 ESF1Q9H501 851 aaKnown RBP16.58■□□□□ 0.24
SMARCA2-217ENST00000491574 PTPRTO14522 1441 aa16.58■□□□□ 0.24
SMARCA2-217ENST00000491574 MYO5CQ9NQX4 1742 aa16.58■□□□□ 0.24
SMARCA2-217ENST00000491574 SPATA31D1Q6ZQQ2 1576 aa16.57■□□□□ 0.24
SMARCA2-217ENST00000491574 DIP2CQ9Y2E4 1556 aa16.56■□□□□ 0.24
SMARCA2-217ENST00000491574 LTBP4Q8N2S1 1624 aa16.56■□□□□ 0.24
SMARCA2-217ENST00000491574 SETD1BQ9UPS6 1966 aaKnown RBP16.55■□□□□ 0.24
SMARCA2-217ENST00000491574 KDM5CP41229 1560 aa16.55■□□□□ 0.24
SMARCA2-217ENST00000491574 TRAPPC8Q9Y2L5 1435 aa16.54■□□□□ 0.24
SMARCA2-217ENST00000491574 C3P01024 1663 aa16.54■□□□□ 0.24
SMARCA2-217ENST00000491574 TROQ12816 1431 aaPredicted RBP16.53■□□□□ 0.24
SMARCA2-217ENST00000491574 FMN1Q68DA7 1419 aa16.53■□□□□ 0.24
SMARCA2-217ENST00000491574 ABCA6Q8N139 1617 aa16.52■□□□□ 0.24
SMARCA2-217ENST00000491574 NCKAP5LQ9HCH0 1330 aa16.52■□□□□ 0.24
SMARCA2-217ENST00000491574 ARHGAP35Q9NRY4 1499 aa16.52■□□□□ 0.23
SMARCA2-217ENST00000491574 NCOA1Q15788 1441 aa16.51■□□□□ 0.23
SMARCA2-217ENST00000491574 MLH3Q9UHC1 1453 aa16.5■□□□□ 0.23
SMARCA2-217ENST00000491574 ZNF335Q9H4Z2 1342 aaPredicted RBP16.49■□□□□ 0.23
SMARCA2-217ENST00000491574 CLIP1P30622 1438 aa16.49■□□□□ 0.23
SMARCA2-217ENST00000491574 UBAP1LF5GYI3 381 aa16.48■□□□□ 0.23
SMARCA2-217ENST00000491574 REREQ9P2R6 1566 aa16.47■□□□□ 0.23
SMARCA2-217ENST00000491574 AGLP35573 1532 aa16.47■□□□□ 0.23
SMARCA2-217ENST00000491574 ZNF777Q9ULD5 760 aaPredicted RBP16.47■□□□□ 0.23
SMARCA2-217ENST00000491574 CDC42BPBQ9Y5S2 1711 aa16.47■□□□□ 0.23
SMARCA2-217ENST00000491574 CAMSAP1Q5T5Y3 1602 aa16.46■□□□□ 0.23
SMARCA2-217ENST00000491574 ZMYM3Q14202 1370 aa16.45■□□□□ 0.22
SMARCA2-217ENST00000491574 LRRIQ1Q96JM4 1722 aa16.45■□□□□ 0.22
SMARCA2-217ENST00000491574 ABCC1P33527 1531 aa16.44■□□□□ 0.22
SMARCA2-217ENST00000491574 CNTLNQ9NXG0 1405 aa16.43■□□□□ 0.22
SMARCA2-217ENST00000491574 IQSEC2Q5JU85 1478 aa16.42■□□□□ 0.22
SMARCA2-217ENST00000491574 KIDINS220Q9ULH0 1771 aa16.42■□□□□ 0.22
SMARCA2-217ENST00000491574 HNRNPMP52272 730 aaKnown RBP eCLIP16.42■□□□□ 0.22
SMARCA2-217ENST00000491574 ITSN2Q9NZM3 1697 aa16.4■□□□□ 0.22
SMARCA2-217ENST00000491574 NPATQ14207 1427 aa16.39■□□□□ 0.21
SMARCA2-217ENST00000491574 PREX2Q70Z35 1606 aa16.39■□□□□ 0.21
SMARCA2-217ENST00000491574 SPAG9O60271 1321 aaKnown RBP16.39■□□□□ 0.21
SMARCA2-217ENST00000491574 GGT6Q6P531 493 aa16.38■□□□□ 0.21
SMARCA2-217ENST00000491574 SAMD9LQ8IVG5 1584 aa16.37■□□□□ 0.21
SMARCA2-217ENST00000491574 SCAF1Q9H7N4 1312 aaKnown RBP16.37■□□□□ 0.21
SMARCA2-217ENST00000491574 PIP4K2BP78356 416 aa16.36■□□□□ 0.21
SMARCA2-217ENST00000491574 PKD2Q13563 968 aa16.36■□□□□ 0.21
SMARCA2-217ENST00000491574 HSPA1LP34931 641 aa16.35■□□□□ 0.21
SMARCA2-217ENST00000491574 SUPT6HQ7KZ85 1726 aaKnown RBP16.35■□□□□ 0.21
SMARCA2-217ENST00000491574 PTPRKQ15262 1439 aa16.34■□□□□ 0.21
SMARCA2-217ENST00000491574 CASKIN1Q8WXD9 1431 aa16.34■□□□□ 0.21
SMARCA2-217ENST00000491574 SYCP2Q9BX26 1530 aa16.34■□□□□ 0.21
SMARCA2-217ENST00000491574 PPP6R1Q9UPN7 881 aa16.33■□□□□ 0.2
SMARCA2-217ENST00000491574 CLTCQ00610 1675 aaKnown RBP16.33■□□□□ 0.2
SMARCA2-217ENST00000491574 CDC42BPAQ5VT25 1732 aa16.33■□□□□ 0.2
SMARCA2-217ENST00000491574 MROH2AA6NES4 1674 aa16.32■□□□□ 0.2
SMARCA2-217ENST00000491574 GPATCH8Q9UKJ3 1502 aaKnown RBP16.31■□□□□ 0.2
SMARCA2-217ENST00000491574 TCOF1Q13428 1488 aaKnown RBP16.31■□□□□ 0.2
SMARCA2-217ENST00000491574 PLA2R1Q13018 1463 aa16.3■□□□□ 0.2
SMARCA2-217ENST00000491574 CCDC18Q5T9S5 1454 aa16.3■□□□□ 0.2
SMARCA2-217ENST00000491574 MYO3AQ8NEV4 1616 aa16.3■□□□□ 0.2
SMARCA2-217ENST00000491574 CEP170BQ9Y4F5 1589 aaPredicted RBP16.3■□□□□ 0.2
SMARCA2-217ENST00000491574 A2MP01023 1474 aa16.29■□□□□ 0.2
SMARCA2-217ENST00000491574 CFDP1Q9UEE9 299 aaPredicted RBP16.29■□□□□ 0.2
SMARCA2-217ENST00000491574 ATP7AQ04656 1500 aa16.28■□□□□ 0.2
SMARCA2-217ENST00000491574 ZNF644Q9H582 1327 aaPredicted RBP16.27■□□□□ 0.2
SMARCA2-217ENST00000491574 FBXO31Q5XUX0 539 aaPredicted RBP16.27■□□□□ 0.2
SMARCA2-217ENST00000491574 SENP3Q9H4L4 574 aaPredicted RBP16.27■□□□□ 0.2
SMARCA2-217ENST00000491574 CHIC1Q5VXU3 224 aa16.26■□□□□ 0.19
SMARCA2-217ENST00000491574 ZNF142P52746 1687 aaPredicted RBP16.25■□□□□ 0.19
SMARCA2-217ENST00000491574 TOM1O60784 492 aa16.25■□□□□ 0.19
SMARCA2-217ENST00000491574 PLXNC1O60486 1568 aa16.25■□□□□ 0.19
SMARCA2-217ENST00000491574 KIAA1107Q9UPP5 1409 aa16.24■□□□□ 0.19
SMARCA2-217ENST00000491574 MED1Q15648 1581 aaPredicted RBP16.24■□□□□ 0.19
SMARCA2-217ENST00000491574 CCNB3Q8WWL7 1395 aa16.24■□□□□ 0.19
SMARCA2-217ENST00000491574 A2ML1A8K2U0 1454 aa16.22■□□□□ 0.19
SMARCA2-217ENST00000491574 INO80Q9ULG1 1556 aaPredicted RBP16.22■□□□□ 0.19
SMARCA2-217ENST00000491574 DNMT1P26358 1616 aaKnown RBP16.22■□□□□ 0.19
SMARCA2-217ENST00000491574 FYCO1Q9BQS8 1478 aa16.21■□□□□ 0.19
SMARCA2-217ENST00000491574 SHANK2Q9UPX8 1470 aa16.2■□□□□ 0.18
SMARCA2-217ENST00000491574 PLEKHH2Q8IVE3 1493 aa16.19■□□□□ 0.18
SMARCA2-217ENST00000491574 TNRQ92752 1358 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms