RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 CCDC144AA2RUR9 1427 aa14.63□□□□□ -0.07
SREBF2-208ENST00000491541 ARID4BQ4LE39 1312 aaPredicted RBP14.63□□□□□ -0.07
SREBF2-208ENST00000491541 PTPRGP23470 1445 aa14.62□□□□□ -0.07
SREBF2-208ENST00000491541 KIAA0556O60303 1618 aa14.62□□□□□ -0.07
SREBF2-208ENST00000491541 KIAA1210Q9ULL0 1709 aa14.61□□□□□ -0.07
SREBF2-208ENST00000491541 SHROOM2Q13796 1616 aa14.6□□□□□ -0.07
SREBF2-208ENST00000491541 MSH5O43196 834 aa14.6□□□□□ -0.07
SREBF2-208ENST00000491541 KTN1Q86UP2 1357 aaKnown RBP14.6□□□□□ -0.07
SREBF2-208ENST00000491541 URB2Q14146 1524 aaKnown RBP14.59□□□□□ -0.07
SREBF2-208ENST00000491541 FANCD2Q9BXW9 1451 aa14.59□□□□□ -0.07
SREBF2-208ENST00000491541 UBTFP17480 764 aaKnown RBP14.58□□□□□ -0.07
SREBF2-208ENST00000491541 EIF4G3O43432 1585 aaKnown RBP14.58□□□□□ -0.08
SREBF2-208ENST00000491541 MAGI2Q86UL8 1455 aa14.58□□□□□ -0.08
SREBF2-208ENST00000491541 MYO5CQ9NQX4 1742 aa14.57□□□□□ -0.08
SREBF2-208ENST00000491541 RBM19Q9Y4C8 960 aaKnown RBP14.57□□□□□ -0.08
SREBF2-208ENST00000491541 RALGAPBQ86X10 1494 aa14.57□□□□□ -0.08
SREBF2-208ENST00000491541 LRPPRCP42704 1394 aaKnown RBP14.57□□□□□ -0.08
SREBF2-208ENST00000491541 RAPGEF6Q8TEU7 1601 aa14.56□□□□□ -0.08
SREBF2-208ENST00000491541 DHX29Q7Z478 1369 aaKnown RBP14.56□□□□□ -0.08
SREBF2-208ENST00000491541 PZPP20742 1482 aa14.56□□□□□ -0.08
SREBF2-208ENST00000491541 IQGAP1P46940 1657 aa14.55□□□□□ -0.08
SREBF2-208ENST00000491541 PLXNC1O60486 1568 aa14.54□□□□□ -0.08
SREBF2-208ENST00000491541 ERICH6Q7L0X2 663 aa14.54□□□□□ -0.08
SREBF2-208ENST00000491541 EPRSP07814 1512 aaKnown RBP14.53□□□□□ -0.08
SREBF2-208ENST00000491541 ZNF608Q9ULD9 1512 aaPredicted RBP14.53□□□□□ -0.08
SREBF2-208ENST00000491541 APLP2Q06481 763 aa14.53□□□□□ -0.08
SREBF2-208ENST00000491541 ANKRD30BQ9BXX2 1392 aa14.51□□□□□ -0.09
SREBF2-208ENST00000491541 ABCC2Q92887 1545 aa14.51□□□□□ -0.09
SREBF2-208ENST00000491541 ATP10AO60312 1499 aa14.51□□□□□ -0.09
SREBF2-208ENST00000491541 ZBED9Q6R2W3 1325 aa14.51□□□□□ -0.09
SREBF2-208ENST00000491541 PRDM15P57071 1507 aaPredicted RBP14.51□□□□□ -0.09
SREBF2-208ENST00000491541 PPRC1Q5VV67 1664 aaKnown RBP14.5□□□□□ -0.09
SREBF2-208ENST00000491541 IQGAP3Q86VI3 1631 aa14.5□□□□□ -0.09
SREBF2-208ENST00000491541 MYO3AQ8NEV4 1616 aa14.5□□□□□ -0.09
SREBF2-208ENST00000491541 IFT172Q9UG01 1749 aa14.48□□□□□ -0.09
SREBF2-208ENST00000491541 EIF2AK4Q9P2K8 1649 aaKnown RBP14.48□□□□□ -0.09
SREBF2-208ENST00000491541 SYNJ2O15056 1496 aa14.47□□□□□ -0.09
SREBF2-208ENST00000491541 WASHC2AQ641Q2 1341 aa14.47□□□□□ -0.09
SREBF2-208ENST00000491541 MYOM1P52179 1685 aa14.47□□□□□ -0.09
SREBF2-208ENST00000491541 PLEKHH2Q8IVE3 1493 aa14.47□□□□□ -0.09
SREBF2-208ENST00000491541 ABCA8O94911 1581 aa14.47□□□□□ -0.09
SREBF2-208ENST00000491541 DEPDC5O75140 1603 aa14.46□□□□□ -0.09
SREBF2-208ENST00000491541 DISP1Q96F81 1524 aa14.45□□□□□ -0.1
SREBF2-208ENST00000491541 NEFLP07196 543 aa14.45□□□□□ -0.1
SREBF2-208ENST00000491541 C11orf95C9JLR9 678 aaPredicted RBP14.44□□□□□ -0.1
SREBF2-208ENST00000491541 PREX2Q70Z35 1606 aa14.44□□□□□ -0.1
SREBF2-208ENST00000491541 USP32Q8NFA0 1604 aa14.44□□□□□ -0.1
SREBF2-208ENST00000491541 DAPK1P53355 1430 aa14.43□□□□□ -0.1
SREBF2-208ENST00000491541 CCDC7Q96M83 1385 aa14.43□□□□□ -0.1
SREBF2-208ENST00000491541 ZC3H13Q5T200 1668 aaKnown RBP14.42□□□□□ -0.1
SREBF2-208ENST00000491541 CEP152O94986 1710 aa14.41□□□□□ -0.1
SREBF2-208ENST00000491541 SPHKAPQ2M3C7 1700 aa14.41□□□□□ -0.1
SREBF2-208ENST00000491541 BLMP54132 1417 aaPredicted RBP14.41□□□□□ -0.1
SREBF2-208ENST00000491541 FHOD3Q2V2M9 1422 aa14.41□□□□□ -0.1
SREBF2-208ENST00000491541 FKBP8Q14318 412 aa14.41□□□□□ -0.1
SREBF2-208ENST00000491541 GPRASP1Q5JY77 1395 aa14.38□□□□□ -0.11
SREBF2-208ENST00000491541 WASHC2CQ9Y4E1 1318 aa14.38□□□□□ -0.11
SREBF2-208ENST00000491541 KCNH8Q96L42 1107 aa14.37□□□□□ -0.11
SREBF2-208ENST00000491541 ZMYM3Q14202 1370 aa14.36□□□□□ -0.11
SREBF2-208ENST00000491541 CDC42BPBQ9Y5S2 1711 aa14.36□□□□□ -0.11
SREBF2-208ENST00000491541 ABCC5O15440 1437 aa14.36□□□□□ -0.11
SREBF2-208ENST00000491541 NUP153P49790 1475 aaKnown RBP14.35□□□□□ -0.11
SREBF2-208ENST00000491541 ITGAEP38570 1179 aa14.35□□□□□ -0.11
SREBF2-208ENST00000491541 INO80Q9ULG1 1556 aaPredicted RBP14.35□□□□□ -0.11
SREBF2-208ENST00000491541 SYNMO15061 1565 aa14.34□□□□□ -0.11
SREBF2-208ENST00000491541 PPP4R2Q9NY27 417 aa14.34□□□□□ -0.11
SREBF2-208ENST00000491541 ROCK2O75116 1388 aaKnown RBP14.34□□□□□ -0.11
SREBF2-208ENST00000491541 ATP1B4Q9UN42 357 aaPredicted RBP14.33□□□□□ -0.11
SREBF2-208ENST00000491541 CAMSAP2Q08AD1 1489 aa14.32□□□□□ -0.12
SREBF2-208ENST00000491541 DUOX2Q9NRD8 1548 aa14.31□□□□□ -0.12
SREBF2-208ENST00000491541 ABCA6Q8N139 1617 aa14.31□□□□□ -0.12
SREBF2-208ENST00000491541 NUP160Q12769 1436 aa14.31□□□□□ -0.12
SREBF2-208ENST00000491541 VWDEQ8N2E2 1590 aa14.31□□□□□ -0.12
SREBF2-208ENST00000491541 RAD54L2Q9Y4B4 1467 aa14.31□□□□□ -0.12
SREBF2-208ENST00000491541 KIAA0586Q9BVV6 1533 aa14.3□□□□□ -0.12
SREBF2-208ENST00000491541 CDK13Q14004 1512 aaKnown RBP14.29□□□□□ -0.12
SREBF2-208ENST00000491541 MADDQ8WXG6 1647 aa14.28□□□□□ -0.12
SREBF2-208ENST00000491541 ARAP3Q8WWN8 1544 aa14.27□□□□□ -0.12
SREBF2-208ENST00000491541 SCAPERQ9BY12 1400 aa14.27□□□□□ -0.12
SREBF2-208ENST00000491541 KIAA1107Q9UPP5 1409 aa14.26□□□□□ -0.13
SREBF2-208ENST00000491541 CCDC141Q6ZP82 1450 aa14.25□□□□□ -0.13
SREBF2-208ENST00000491541 PRKCSHP14314 528 aaPredicted RBP14.25□□□□□ -0.13
SREBF2-208ENST00000491541 COL17A1Q9UMD9 1497 aaPredicted RBP14.24□□□□□ -0.13
SREBF2-208ENST00000491541 SHPRHQ149N8 1683 aa14.24□□□□□ -0.13
SREBF2-208ENST00000491541 USP35Q9P2H5 1018 aa14.24□□□□□ -0.13
SREBF2-208ENST00000491541 PARD3Q8TEW0 1356 aa14.23□□□□□ -0.13
SREBF2-208ENST00000491541 PRKRIP1Q9H875 184 aaPredicted RBP14.23□□□□□ -0.13
SREBF2-208ENST00000491541 BRD4O60885 1362 aaPredicted RBP14.22□□□□□ -0.13
SREBF2-208ENST00000491541 ANP32CO43423 234 aa14.22□□□□□ -0.13
SREBF2-208ENST00000491541 TONSLQ96HA7 1378 aa14.22□□□□□ -0.13
SREBF2-208ENST00000491541 GPATCH8Q9UKJ3 1502 aaKnown RBP14.21□□□□□ -0.14
SREBF2-208ENST00000491541 YEATS2Q9ULM3 1422 aa14.19□□□□□ -0.14
SREBF2-208ENST00000491541 SAMD9LQ8IVG5 1584 aa14.19□□□□□ -0.14
SREBF2-208ENST00000491541 MAGI1Q96QZ7 1491 aaPredicted RBP14.19□□□□□ -0.14
SREBF2-208ENST00000491541 IFT140Q96RY7 1462 aa14.18□□□□□ -0.14
SREBF2-208ENST00000491541 TRIM52Q96A61 297 aa14.18□□□□□ -0.14
SREBF2-208ENST00000491541 TROQ12816 1431 aaPredicted RBP14.17□□□□□ -0.14
SREBF2-208ENST00000491541 WDR7Q9Y4E6 1490 aa14.17□□□□□ -0.14
SREBF2-208ENST00000491541 MS4A1P11836 297 aa14.17□□□□□ -0.14
SREBF2-208ENST00000491541 ANKRD26Q9UPS8 1709 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms