RNA–Protein interactions for RNA: ENST00000491390.1

NCSTN-214, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-214ENST00000491390 HECW1Q76N89 1606 aa18.92■□□□□ 0.62
NCSTN-214ENST00000491390 PTPRTO14522 1441 aa18.91■□□□□ 0.62
NCSTN-214ENST00000491390 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.9■□□□□ 0.62
NCSTN-214ENST00000491390 FAM9AQ8IZU1 332 aaPredicted RBP18.88■□□□□ 0.61
NCSTN-214ENST00000491390 MLECQ14165 292 aa18.87■□□□□ 0.61
NCSTN-214ENST00000491390 ATP10AO60312 1499 aa18.85■□□□□ 0.61
NCSTN-214ENST00000491390 UHRF1BP1Q6BDS2 1440 aa18.85■□□□□ 0.61
NCSTN-214ENST00000491390 C9orf84Q5VXU9 1444 aa18.83■□□□□ 0.61
NCSTN-214ENST00000491390 CEBPAP49715 358 aaPredicted RBP18.83■□□□□ 0.6
NCSTN-214ENST00000491390 RANGAP1P46060 587 aaPredicted RBP18.82■□□□□ 0.6
NCSTN-214ENST00000491390 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.8■□□□□ 0.6
NCSTN-214ENST00000491390 HNRNPUL2Q1KMD3 747 aaKnown RBP18.8■□□□□ 0.6
NCSTN-214ENST00000491390 SCAPERQ9BY12 1400 aa18.8■□□□□ 0.6
NCSTN-214ENST00000491390 PLEKHD1A6NEE1 506 aa18.78■□□□□ 0.6
NCSTN-214ENST00000491390 SETD1BQ9UPS6 1966 aaKnown RBP18.78■□□□□ 0.6
NCSTN-214ENST00000491390 CSRNP3Q8WYN3 585 aa18.77■□□□□ 0.6
NCSTN-214ENST00000491390 PLCH2O75038 1416 aa18.76■□□□□ 0.59
NCSTN-214ENST00000491390 NCOA1Q15788 1441 aa18.75■□□□□ 0.59
NCSTN-214ENST00000491390 REREQ9P2R6 1566 aa18.73■□□□□ 0.59
NCSTN-214ENST00000491390 C3P01024 1663 aa18.73■□□□□ 0.59
NCSTN-214ENST00000491390 KDM5CP41229 1560 aa18.72■□□□□ 0.59
NCSTN-214ENST00000491390 DIP2CQ9Y2E4 1556 aa18.69■□□□□ 0.58
NCSTN-214ENST00000491390 TRAPPC8Q9Y2L5 1435 aa18.68■□□□□ 0.58
NCSTN-214ENST00000491390 ZNF518AQ6AHZ1 1483 aa18.68■□□□□ 0.58
NCSTN-214ENST00000491390 AGLP35573 1532 aa18.65■□□□□ 0.58
NCSTN-214ENST00000491390 CDK13Q14004 1512 aaKnown RBP18.65■□□□□ 0.58
NCSTN-214ENST00000491390 EHMT2Q96KQ7 1210 aa18.64■□□□□ 0.57
NCSTN-214ENST00000491390 MED1Q15648 1581 aaPredicted RBP18.63■□□□□ 0.57
NCSTN-214ENST00000491390 ABCA6Q8N139 1617 aa18.63■□□□□ 0.57
NCSTN-214ENST00000491390 MYO5CQ9NQX4 1742 aa18.63■□□□□ 0.57
NCSTN-214ENST00000491390 CAMSAP1Q5T5Y3 1602 aa18.61■□□□□ 0.57
NCSTN-214ENST00000491390 EFCAB2Q5VUJ9 269 aa18.61■□□□□ 0.57
NCSTN-214ENST00000491390 MLH3Q9UHC1 1453 aa18.6■□□□□ 0.57
NCSTN-214ENST00000491390 UBAP1LF5GYI3 381 aa18.6■□□□□ 0.57
NCSTN-214ENST00000491390 ZNF335Q9H4Z2 1342 aaPredicted RBP18.59■□□□□ 0.57
NCSTN-214ENST00000491390 NPATQ14207 1427 aa18.58■□□□□ 0.57
NCSTN-214ENST00000491390 AFAP1Q8N556 730 aa18.58■□□□□ 0.56
NCSTN-214ENST00000491390 CNTLNQ9NXG0 1405 aa18.57■□□□□ 0.56
NCSTN-214ENST00000491390 EEA1Q15075 1411 aa18.57■□□□□ 0.56
NCSTN-214ENST00000491390 PLA2R1Q13018 1463 aa18.55■□□□□ 0.56
NCSTN-214ENST00000491390 TCOF1Q13428 1488 aaKnown RBP18.55■□□□□ 0.56
NCSTN-214ENST00000491390 KIF14Q15058 1648 aa18.55■□□□□ 0.56
NCSTN-214ENST00000491390 MROH2AA6NES4 1674 aa18.54■□□□□ 0.56
NCSTN-214ENST00000491390 ZNF142P52746 1687 aaPredicted RBP18.53■□□□□ 0.56
NCSTN-214ENST00000491390 ARHGAP5Q13017 1502 aa18.51■□□□□ 0.55
NCSTN-214ENST00000491390 NCKAP5LQ9HCH0 1330 aa18.5■□□□□ 0.55
NCSTN-214ENST00000491390 HSPA1LP34931 641 aa18.5■□□□□ 0.55
NCSTN-214ENST00000491390 ATP1B4Q9UN42 357 aaPredicted RBP18.48■□□□□ 0.55
NCSTN-214ENST00000491390 MYO3AQ8NEV4 1616 aa18.48■□□□□ 0.55
NCSTN-214ENST00000491390 ABCC1P33527 1531 aa18.48■□□□□ 0.55
NCSTN-214ENST00000491390 KIDINS220Q9ULH0 1771 aa18.47■□□□□ 0.55
NCSTN-214ENST00000491390 PKD2Q13563 968 aa18.47■□□□□ 0.55
NCSTN-214ENST00000491390 ESF1Q9H501 851 aaKnown RBP18.47■□□□□ 0.55
NCSTN-214ENST00000491390 TROQ12816 1431 aaPredicted RBP18.47■□□□□ 0.55
NCSTN-214ENST00000491390 CEP170BQ9Y4F5 1589 aaPredicted RBP18.46■□□□□ 0.55
NCSTN-214ENST00000491390 UBTFP17480 764 aaKnown RBP18.45■□□□□ 0.54
NCSTN-214ENST00000491390 CDC42BPBQ9Y5S2 1711 aa18.45■□□□□ 0.54
NCSTN-214ENST00000491390 ZMYM3Q14202 1370 aa18.44■□□□□ 0.54
NCSTN-214ENST00000491390 ITSN2Q9NZM3 1697 aa18.44■□□□□ 0.54
NCSTN-214ENST00000491390 PREX2Q70Z35 1606 aa18.41■□□□□ 0.54
NCSTN-214ENST00000491390 ALKQ9UM73 1620 aa18.41■□□□□ 0.54
NCSTN-214ENST00000491390 PTPRKQ15262 1439 aa18.41■□□□□ 0.54
NCSTN-214ENST00000491390 CPS1P31327 1500 aa18.4■□□□□ 0.54
NCSTN-214ENST00000491390 MYT1LQ9UL68 1186 aa18.39■□□□□ 0.53
NCSTN-214ENST00000491390 PPP6R1Q9UPN7 881 aa18.39■□□□□ 0.53
NCSTN-214ENST00000491390 CDK11AQ9UQ88 783 aaPredicted RBP18.39■□□□□ 0.53
NCSTN-214ENST00000491390 FMN1Q68DA7 1419 aa18.39■□□□□ 0.53
NCSTN-214ENST00000491390 ARHGAP35Q9NRY4 1499 aa18.39■□□□□ 0.53
NCSTN-214ENST00000491390 CLIP1P30622 1438 aa18.37■□□□□ 0.53
NCSTN-214ENST00000491390 PLXNC1O60486 1568 aa18.37■□□□□ 0.53
NCSTN-214ENST00000491390 SAMD9LQ8IVG5 1584 aa18.36■□□□□ 0.53
NCSTN-214ENST00000491390 NEURL4Q96JN8 1562 aa18.36■□□□□ 0.53
NCSTN-214ENST00000491390 SUPT6HQ7KZ85 1726 aaKnown RBP18.35■□□□□ 0.53
NCSTN-214ENST00000491390 CLTCQ00610 1675 aaKnown RBP18.35■□□□□ 0.53
NCSTN-214ENST00000491390 TOM1O60784 492 aa18.35■□□□□ 0.53
NCSTN-214ENST00000491390 CHIC1Q5VXU3 224 aa18.35■□□□□ 0.53
NCSTN-214ENST00000491390 LRRIQ1Q96JM4 1722 aa18.35■□□□□ 0.53
NCSTN-214ENST00000491390 PIP4K2BP78356 416 aa18.34■□□□□ 0.53
NCSTN-214ENST00000491390 A2ML1A8K2U0 1454 aa18.33■□□□□ 0.53
NCSTN-214ENST00000491390 SHANK2Q9UPX8 1470 aa18.33■□□□□ 0.53
NCSTN-214ENST00000491390 DNMT1P26358 1616 aaKnown RBP18.33■□□□□ 0.52
NCSTN-214ENST00000491390 SCAF1Q9H7N4 1312 aaKnown RBP18.32■□□□□ 0.52
NCSTN-214ENST00000491390 PHF23Q9BUL5 403 aaPredicted RBP18.32■□□□□ 0.52
NCSTN-214ENST00000491390 VWDEQ8N2E2 1590 aa18.31■□□□□ 0.52
NCSTN-214ENST00000491390 POLR1AO95602 1720 aaPredicted RBP18.29■□□□□ 0.52
NCSTN-214ENST00000491390 INO80Q9ULG1 1556 aaPredicted RBP18.28■□□□□ 0.52
NCSTN-214ENST00000491390 CDC42BPAQ5VT25 1732 aa18.27■□□□□ 0.52
NCSTN-214ENST00000491390 ATP7AQ04656 1500 aa18.27■□□□□ 0.51
NCSTN-214ENST00000491390 RGS17Q9UGC6 210 aaPredicted RBP18.26■□□□□ 0.51
NCSTN-214ENST00000491390 SYCP2Q9BX26 1530 aa18.25■□□□□ 0.51
NCSTN-214ENST00000491390 A2MP01023 1474 aa18.25■□□□□ 0.51
NCSTN-214ENST00000491390 SPAG9O60271 1321 aaKnown RBP18.23■□□□□ 0.51
NCSTN-214ENST00000491390 MED14O60244 1454 aa18.21■□□□□ 0.51
NCSTN-214ENST00000491390 KIAA1107Q9UPP5 1409 aa18.2■□□□□ 0.5
NCSTN-214ENST00000491390 DEPDC5O75140 1603 aa18.19■□□□□ 0.5
NCSTN-214ENST00000491390 CCDC18Q5T9S5 1454 aa18.19■□□□□ 0.5
NCSTN-214ENST00000491390 RNF17Q9BXT8 1623 aaKnown RBP18.18■□□□□ 0.5
NCSTN-214ENST00000491390 LRRC7Q96NW7 1537 aa18.17■□□□□ 0.5
NCSTN-214ENST00000491390 GPATCH8Q9UKJ3 1502 aaKnown RBP18.17■□□□□ 0.5
NCSTN-214ENST00000491390 STRCP1A6NGW2 1772 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms