RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	ATP10A	O60312	1499 aa		32.34	■■■□□ 2.77
CDK5RAP2-218	ENST00000491334	SIGLEC1	Q9BZZ2	1709 aa		32.34	■■■□□ 2.77
CDK5RAP2-218	ENST00000491334	EFCAB2	Q5VUJ9	269 aa		32.32	■■■□□ 2.76
CDK5RAP2-218	ENST00000491334	FER1L4	A9Z1Z3	1794 aa		32.32	■■■□□ 2.76
CDK5RAP2-218	ENST00000491334	CEBPA	P49715	358 aa	Predicted RBP	32.31	■■■□□ 2.76
CDK5RAP2-218	ENST00000491334	EEA1	Q15075	1411 aa		32.31	■■■□□ 2.76
CDK5RAP2-218	ENST00000491334	DISP3	Q9P2K9	1392 aa		32.29	■■■□□ 2.76
CDK5RAP2-218	ENST00000491334	C9orf84	Q5VXU9	1444 aa		32.26	■■■□□ 2.76
CDK5RAP2-218	ENST00000491334	ARHGEF12	Q9NZN5	1544 aa		32.26	■■■□□ 2.76
CDK5RAP2-218	ENST00000491334	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.23	■■■□□ 2.75
CDK5RAP2-218	ENST00000491334	SOCS7	O14512	581 aa		32.22	■■■□□ 2.75
CDK5RAP2-218	ENST00000491334	ILDR2	Q71H61	639 aa		32.22	■■■□□ 2.75
CDK5RAP2-218	ENST00000491334	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.22	■■■□□ 2.75
CDK5RAP2-218	ENST00000491334	CDK13	Q14004	1512 aa	Known RBP	32.21	■■■□□ 2.75
CDK5RAP2-218	ENST00000491334	PREX1	Q8TCU6	1659 aa		32.21	■■■□□ 2.75
CDK5RAP2-218	ENST00000491334	MYT1L	Q9UL68	1186 aa		32.18	■■■□□ 2.74
CDK5RAP2-218	ENST00000491334	UHRF1BP1	Q6BDS2	1440 aa		32.17	■■■□□ 2.74
CDK5RAP2-218	ENST00000491334	AFAP1	Q8N556	730 aa		32.15	■■■□□ 2.74
CDK5RAP2-218	ENST00000491334	SETD1B	Q9UPS6	1966 aa	Known RBP	32.15	■■■□□ 2.74
CDK5RAP2-218	ENST00000491334	ZNF518A	Q6AHZ1	1483 aa		32.12	■■■□□ 2.73
CDK5RAP2-218	ENST00000491334	STRC	Q7RTU9	1775 aa		32.09	■■■□□ 2.73
CDK5RAP2-218	ENST00000491334	ESF1	Q9H501	851 aa	Known RBP	32.09	■■■□□ 2.73
CDK5RAP2-218	ENST00000491334	FMN1	Q68DA7	1419 aa		32.07	■■■□□ 2.72
CDK5RAP2-218	ENST00000491334	PTPRT	O14522	1441 aa		32.06	■■■□□ 2.72
CDK5RAP2-218	ENST00000491334	MYO5C	Q9NQX4	1742 aa		32.06	■■■□□ 2.72
CDK5RAP2-218	ENST00000491334	UBTF	P17480	764 aa	Known RBP	32.02	■■■□□ 2.72
CDK5RAP2-218	ENST00000491334	ARHGAP5	Q13017	1502 aa		32.01	■■■□□ 2.72
CDK5RAP2-218	ENST00000491334	KDM5C	P41229	1560 aa		31.98	■■■□□ 2.71
CDK5RAP2-218	ENST00000491334	TRO	Q12816	1431 aa	Predicted RBP	31.98	■■■□□ 2.71
CDK5RAP2-218	ENST00000491334	CLIP1	P30622	1438 aa		31.97	■■■□□ 2.71
CDK5RAP2-218	ENST00000491334	TRAPPC8	Q9Y2L5	1435 aa		31.96	■■■□□ 2.71
CDK5RAP2-218	ENST00000491334	KIF14	Q15058	1648 aa		31.95	■■■□□ 2.71
CDK5RAP2-218	ENST00000491334	MLH3	Q9UHC1	1453 aa		31.94	■■■□□ 2.7
CDK5RAP2-218	ENST00000491334	RERE	Q9P2R6	1566 aa		31.94	■■■□□ 2.7
CDK5RAP2-218	ENST00000491334	DIP2C	Q9Y2E4	1556 aa		31.93	■■■□□ 2.7
CDK5RAP2-218	ENST00000491334	EHMT2	Q96KQ7	1210 aa		31.92	■■■□□ 2.7
CDK5RAP2-218	ENST00000491334	AGL	P35573	1532 aa		31.89	■■■□□ 2.7
CDK5RAP2-218	ENST00000491334	C3	P01024	1663 aa		31.88	■■■□□ 2.69
CDK5RAP2-218	ENST00000491334	SPATA31D1	Q6ZQQ2	1576 aa		31.87	■■■□□ 2.69
CDK5RAP2-218	ENST00000491334	IQSEC2	Q5JU85	1478 aa		31.87	■■■□□ 2.69
CDK5RAP2-218	ENST00000491334	ARHGAP35	Q9NRY4	1499 aa		31.87	■■■□□ 2.69
CDK5RAP2-218	ENST00000491334	LTBP4	Q8N2S1	1624 aa		31.86	■■■□□ 2.69
CDK5RAP2-218	ENST00000491334	CNTLN	Q9NXG0	1405 aa		31.86	■■■□□ 2.69
CDK5RAP2-218	ENST00000491334	NCOA1	Q15788	1441 aa		31.83	■■■□□ 2.69
CDK5RAP2-218	ENST00000491334	ABCA6	Q8N139	1617 aa		31.82	■■■□□ 2.68
CDK5RAP2-218	ENST00000491334	CDC42BPB	Q9Y5S2	1711 aa		31.78	■■■□□ 2.68
CDK5RAP2-218	ENST00000491334	NPAT	Q14207	1427 aa		31.75	■■■□□ 2.67
CDK5RAP2-218	ENST00000491334	ZMYM3	Q14202	1370 aa		31.73	■■■□□ 2.67
CDK5RAP2-218	ENST00000491334	ABCC1	P33527	1531 aa		31.73	■■■□□ 2.67
CDK5RAP2-218	ENST00000491334	UBAP1L	F5GYI3	381 aa		31.72	■■■□□ 2.67
CDK5RAP2-218	ENST00000491334	NCKAP5L	Q9HCH0	1330 aa		31.72	■■■□□ 2.67
CDK5RAP2-218	ENST00000491334	CAMSAP1	Q5T5Y3	1602 aa		31.7	■■■□□ 2.66
CDK5RAP2-218	ENST00000491334	PREX2	Q70Z35	1606 aa		31.68	■■■□□ 2.66
CDK5RAP2-218	ENST00000491334	PKD2	Q13563	968 aa		31.68	■■■□□ 2.66
CDK5RAP2-218	ENST00000491334	ZNF777	Q9ULD5	760 aa	Predicted RBP	31.68	■■■□□ 2.66
CDK5RAP2-218	ENST00000491334	KIDINS220	Q9ULH0	1771 aa		31.68	■■■□□ 2.66
CDK5RAP2-218	ENST00000491334	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	31.67	■■■□□ 2.66
CDK5RAP2-218	ENST00000491334	SPAG9	O60271	1321 aa	Known RBP	31.66	■■■□□ 2.66
CDK5RAP2-218	ENST00000491334	ITSN2	Q9NZM3	1697 aa		31.65	■■■□□ 2.66
CDK5RAP2-218	ENST00000491334	CCDC18	Q5T9S5	1454 aa		31.64	■■■□□ 2.66
CDK5RAP2-218	ENST00000491334	LRRIQ1	Q96JM4	1722 aa		31.63	■■■□□ 2.65
CDK5RAP2-218	ENST00000491334	CASKIN1	Q8WXD9	1431 aa		31.61	■■■□□ 2.65
CDK5RAP2-218	ENST00000491334	MROH2A	A6NES4	1674 aa		31.6	■■■□□ 2.65
CDK5RAP2-218	ENST00000491334	HNRNPM	P52272	730 aa	Known RBP eCLIP	31.6	■■■□□ 2.65
CDK5RAP2-218	ENST00000491334	SAMD9L	Q8IVG5	1584 aa		31.58	■■■□□ 2.65
CDK5RAP2-218	ENST00000491334	PLA2R1	Q13018	1463 aa		31.55	■■■□□ 2.64
CDK5RAP2-218	ENST00000491334	GGT6	Q6P531	493 aa		31.54	■■■□□ 2.64
CDK5RAP2-218	ENST00000491334	PPP6R1	Q9UPN7	881 aa		31.54	■■■□□ 2.64
CDK5RAP2-218	ENST00000491334	CDC42BPA	Q5VT25	1732 aa		31.52	■■■□□ 2.64
CDK5RAP2-218	ENST00000491334	PTPRK	Q15262	1439 aa		31.49	■■■□□ 2.63
CDK5RAP2-218	ENST00000491334	CFDP1	Q9UEE9	299 aa	Predicted RBP	31.49	■■■□□ 2.63
CDK5RAP2-218	ENST00000491334	SUPT6H	Q7KZ85	1726 aa	Known RBP	31.49	■■■□□ 2.63
CDK5RAP2-218	ENST00000491334	TCOF1	Q13428	1488 aa	Known RBP	31.48	■■■□□ 2.63
CDK5RAP2-218	ENST00000491334	GPATCH8	Q9UKJ3	1502 aa	Known RBP	31.48	■■■□□ 2.63
CDK5RAP2-218	ENST00000491334	KIAA1107	Q9UPP5	1409 aa		31.48	■■■□□ 2.63
CDK5RAP2-218	ENST00000491334	A2M	P01023	1474 aa		31.47	■■■□□ 2.63
CDK5RAP2-218	ENST00000491334	SYCP2	Q9BX26	1530 aa		31.47	■■■□□ 2.63
CDK5RAP2-218	ENST00000491334	PLEKHH2	Q8IVE3	1493 aa		31.45	■■■□□ 2.62
CDK5RAP2-218	ENST00000491334	CLTC	Q00610	1675 aa	Known RBP	31.44	■■■□□ 2.62
CDK5RAP2-218	ENST00000491334	ATP7A	Q04656	1500 aa		31.44	■■■□□ 2.62
CDK5RAP2-218	ENST00000491334	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	31.44	■■■□□ 2.62
CDK5RAP2-218	ENST00000491334	SCAF1	Q9H7N4	1312 aa	Known RBP	31.43	■■■□□ 2.62
CDK5RAP2-218	ENST00000491334	ZNF142	P52746	1687 aa	Predicted RBP	31.42	■■■□□ 2.62
CDK5RAP2-218	ENST00000491334	TOM1	O60784	492 aa		31.42	■■■□□ 2.62
CDK5RAP2-218	ENST00000491334	MYO3A	Q8NEV4	1616 aa		31.42	■■■□□ 2.62
CDK5RAP2-218	ENST00000491334	HSPA1L	P34931	641 aa		31.4	■■■□□ 2.62
CDK5RAP2-218	ENST00000491334	FYCO1	Q9BQS8	1478 aa		31.4	■■■□□ 2.62
CDK5RAP2-218	ENST00000491334	PIP4K2B	P78356	416 aa		31.39	■■■□□ 2.62
CDK5RAP2-218	ENST00000491334	PLXNC1	O60486	1568 aa		31.39	■■■□□ 2.61
CDK5RAP2-218	ENST00000491334	CCNB3	Q8WWL7	1395 aa		31.38	■■■□□ 2.61
CDK5RAP2-218	ENST00000491334	A2ML1	A8K2U0	1454 aa		31.35	■■■□□ 2.61
CDK5RAP2-218	ENST00000491334	CHIC1	Q5VXU3	224 aa		31.35	■■■□□ 2.61
CDK5RAP2-218	ENST00000491334	INO80	Q9ULG1	1556 aa	Predicted RBP	31.33	■■■□□ 2.61
CDK5RAP2-218	ENST00000491334	ANKLE2	Q86XL3	938 aa		31.27	■■■□□ 2.6
CDK5RAP2-218	ENST00000491334	CPS1	P31327	1500 aa		31.27	■■■□□ 2.6
CDK5RAP2-218	ENST00000491334	DNMT1	P26358	1616 aa	Known RBP	31.27	■■■□□ 2.6
CDK5RAP2-218	ENST00000491334	FBXO31	Q5XUX0	539 aa	Predicted RBP	31.26	■■■□□ 2.59
CDK5RAP2-218	ENST00000491334	MTUS2	Q5JR59	1369 aa		31.25	■■■□□ 2.59
CDK5RAP2-218	ENST00000491334	SHANK2	Q9UPX8	1470 aa		31.25	■■■□□ 2.59
CDK5RAP2-218	ENST00000491334	ZNF644	Q9H582	1327 aa	Predicted RBP	31.24	■■■□□ 2.59

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms