RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 IRX5P78411 483 aaPredicted RBP8.48□□□□□ -1.05
EPCAM-206ENST00000490733 PLCG2P16885 1265 aa8.46□□□□□ -1.06
EPCAM-206ENST00000490733 GOLGA2Q08379 1002 aa8.46□□□□□ -1.06
EPCAM-206ENST00000490733 CABP2Q9NPB3 220 aa8.46□□□□□ -1.06
EPCAM-206ENST00000490733 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.45□□□□□ -1.06
EPCAM-206ENST00000490733 POTEB3A0JP26 581 aa8.45□□□□□ -1.06
EPCAM-206ENST00000490733 RGL2O15211 777 aa8.45□□□□□ -1.06
EPCAM-206ENST00000490733 VGFO15240 615 aaPredicted RBP8.45□□□□□ -1.06
EPCAM-206ENST00000490733 MKRN3Q13064 507 aaKnown RBP8.45□□□□□ -1.06
EPCAM-206ENST00000490733 POTEBQ6S5H4 581 aa8.45□□□□□ -1.06
EPCAM-206ENST00000490733 ZFP91Q96JP5 570 aaPredicted RBP8.45□□□□□ -1.06
EPCAM-206ENST00000490733 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.45□□□□□ -1.06
EPCAM-206ENST00000490733 OCEL1Q9H607 264 aa8.44□□□□□ -1.06
EPCAM-206ENST00000490733 MYT1LQ9UL68 1186 aa8.43□□□□□ -1.06
EPCAM-206ENST00000490733 PDCD7Q8N8D1 485 aaKnown RBP8.41□□□□□ -1.06
EPCAM-206ENST00000490733 EFCAB3Q8N7B9 438 aa8.4□□□□□ -1.06
EPCAM-206ENST00000490733 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.4□□□□□ -1.061e-7■■□□□ 12.1
EPCAM-206ENST00000490733 ILDR1Q86SU0 546 aaPredicted RBP8.39□□□□□ -1.07
EPCAM-206ENST00000490733 CFTRP13569 1480 aa8.38□□□□□ -1.07
EPCAM-206ENST00000490733 PRDM2Q13029 1718 aa8.38□□□□□ -1.07
EPCAM-206ENST00000490733 NESP48681 1621 aa8.37□□□□□ -1.07
EPCAM-206ENST00000490733 BCL11BQ9C0K0 894 aaPredicted RBP8.37□□□□□ -1.07
EPCAM-206ENST00000490733 TAOK2Q9UL54 1235 aa8.37□□□□□ -1.07
EPCAM-206ENST00000490733 CADPSQ9ULU8 1353 aa8.36□□□□□ -1.07
EPCAM-206ENST00000490733 STK25O00506 426 aa8.35□□□□□ -1.07
EPCAM-206ENST00000490733 DPY19L2Q6NUT2 758 aa8.35□□□□□ -1.07
EPCAM-206ENST00000490733 STK24Q9Y6E0 443 aa8.35□□□□□ -1.07
EPCAM-206ENST00000490733 LAMC3Q9Y6N6 1575 aa8.34□□□□□ -1.07
EPCAM-206ENST00000490733 ABCC8Q09428 1581 aa8.31□□□□□ -1.08
EPCAM-206ENST00000490733 SOX12O15370 315 aa8.31□□□□□ -1.08
EPCAM-206ENST00000490733 PHF8Q9UPP1 1060 aa8.31□□□□□ -1.08
EPCAM-206ENST00000490733 L3MBTL3Q96JM7 780 aaPredicted RBP8.3□□□□□ -1.08
EPCAM-206ENST00000490733 MS4A4AQ96JQ5 239 aa8.29□□□□□ -1.08
EPCAM-206ENST00000490733 KIF21AQ7Z4S6 1674 aa8.29□□□□□ -1.08
EPCAM-206ENST00000490733 FANCD2Q9BXW9 1451 aa8.27□□□□□ -1.09
EPCAM-206ENST00000490733 PTGER2P43116 358 aa8.27□□□□□ -1.09
EPCAM-206ENST00000490733 MFRPQ9BY79 579 aa8.27□□□□□ -1.09
EPCAM-206ENST00000490733 SYNJ1O43426 1573 aa8.27□□□□□ -1.09
EPCAM-206ENST00000490733 FBXO22Q8NEZ5 403 aa8.26□□□□□ -1.09
EPCAM-206ENST00000490733 BOLA1Q9Y3E2 137 aa8.26□□□□□ -1.09
EPCAM-206ENST00000490733 C3orf67Q6ZVT6 689 aa8.25□□□□□ -1.09
EPCAM-206ENST00000490733 HS6ST3Q8IZP7 471 aa8.25□□□□□ -1.09
EPCAM-206ENST00000490733 CUX1P39880 1505 aa8.24□□□□□ -1.09
EPCAM-206ENST00000490733 WRNQ14191 1432 aaPredicted RBP eCLIP8.24□□□□□ -1.09
EPCAM-206ENST00000490733 PDS5BQ9NTI5 1447 aa8.24□□□□□ -1.09
EPCAM-206ENST00000490733 CHGAP10645 457 aaKnown RBP8.24□□□□□ -1.09
EPCAM-206ENST00000490733 NLRP6P59044 892 aa8.24□□□□□ -1.09
EPCAM-206ENST00000490733 PLA2G2EQ9NZK7 142 aa8.24□□□□□ -1.09
EPCAM-206ENST00000490733 BIVM-ERCC5R4GMW8 1640 aa8.23□□□□□ -1.09
EPCAM-206ENST00000490733 G3V3G9 751 aa8.23□□□□□ -1.09
EPCAM-206ENST00000490733 CEP164Q9UPV0 1460 aa8.23□□□□□ -1.09
EPCAM-206ENST00000490733 TOP2BQ02880 1626 aa8.22□□□□□ -1.09
EPCAM-206ENST00000490733 URB2Q14146 1524 aaKnown RBP8.21□□□□□ -1.1
EPCAM-206ENST00000490733 MICALL2Q8IY33 904 aa8.21□□□□□ -1.1
EPCAM-206ENST00000490733 ERBB3P21860 1342 aa8.2□□□□□ -1.1
EPCAM-206ENST00000490733 DNMBPQ6XZF7 1577 aa8.19□□□□□ -1.1
EPCAM-206ENST00000490733 AMER1Q5JTC6 1135 aaPredicted RBP8.19□□□□□ -1.1
EPCAM-206ENST00000490733 RTN4Q9NQC3 1192 aaKnown RBP8.19□□□□□ -1.1
EPCAM-206ENST00000490733 TOPBP1Q92547 1522 aa8.19□□□□□ -1.1
EPCAM-206ENST00000490733 THOC2Q8NI27 1593 aaKnown RBP8.18□□□□□ -1.1
EPCAM-206ENST00000490733 NKX1-1Q15270 411 aaPredicted RBP8.17□□□□□ -1.1
EPCAM-206ENST00000490733 MRC2Q9UBG0 1479 aa8.17□□□□□ -1.1
EPCAM-206ENST00000490733 WDR62O43379 1518 aa8.16□□□□□ -1.1
EPCAM-206ENST00000490733 ERCC6Q03468 1493 aa8.16□□□□□ -1.1
EPCAM-206ENST00000490733 DNAJC5Q9H3Z4 198 aa8.16□□□□□ -1.1
EPCAM-206ENST00000490733 FGD5Q6ZNL6 1462 aa8.15□□□□□ -1.1
EPCAM-206ENST00000490733 PPP1R37O75864 691 aa8.15□□□□□ -1.1
EPCAM-206ENST00000490733 TMEM92Q6UXU6 159 aa8.15□□□□□ -1.1
EPCAM-206ENST00000490733 POLA1P09884 1462 aaPredicted RBP8.14□□□□□ -1.11
EPCAM-206ENST00000490733 RUSC2Q8N2Y8 1516 aa8.12□□□□□ -1.11
EPCAM-206ENST00000490733 SOGA1O94964 1423 aa8.12□□□□□ -1.11
EPCAM-206ENST00000490733 WDR97A6NE52 1622 aa8.11□□□□□ -1.11
EPCAM-206ENST00000490733 HOXB1P14653 301 aaPredicted RBP8.11□□□□□ -1.11
EPCAM-206ENST00000490733 CUX2O14529 1486 aa8.11□□□□□ -1.11
EPCAM-206ENST00000490733 RAD54L2Q9Y4B4 1467 aa8.11□□□□□ -1.11
EPCAM-206ENST00000490733 TARBP1Q13395 1621 aaKnown RBP8.11□□□□□ -1.11
EPCAM-206ENST00000490733 IRX2Q9BZI1 471 aaPredicted RBP8.1□□□□□ -1.11
EPCAM-206ENST00000490733 ZNF710Q8N1W2 664 aa8.09□□□□□ -1.11
EPCAM-206ENST00000490733 ABCA10Q8WWZ4 1543 aa8.08□□□□□ -1.12
EPCAM-206ENST00000490733 HOXB3P14651 431 aaPredicted RBP8.07□□□□□ -1.12
EPCAM-206ENST00000490733 VARS2Q5ST30 1063 aaKnown RBP8.07□□□□□ -1.12
EPCAM-206ENST00000490733 GTPBP6O43824 516 aaPredicted RBP8.06□□□□□ -1.12
EPCAM-206ENST00000490733 ABCA5Q8WWZ7 1642 aa8.05□□□□□ -1.12
EPCAM-206ENST00000490733 KIF3CO14782 793 aa8.05□□□□□ -1.12
EPCAM-206ENST00000490733 FAM9AQ8IZU1 332 aaPredicted RBP8.05□□□□□ -1.12
EPCAM-206ENST00000490733 IFT140Q96RY7 1462 aa8.05□□□□□ -1.12
EPCAM-206ENST00000490733 C2orf72A6NCS6 295 aa8.04□□□□□ -1.12
EPCAM-206ENST00000490733 ZNF687Q8N1G0 1237 aa8.04□□□□□ -1.12
EPCAM-206ENST00000490733 RYDENQ9NUL5 291 aaKnown RBP8.04□□□□□ -1.12
EPCAM-206ENST00000490733 EEA1Q15075 1411 aa8.03□□□□□ -1.12
EPCAM-206ENST00000490733 KIF27Q86VH2 1401 aa8.03□□□□□ -1.12
EPCAM-206ENST00000490733 ZNF608Q9ULD9 1512 aaPredicted RBP8.03□□□□□ -1.12
EPCAM-206ENST00000490733 HCSTQ9UBK5 93 aa8.03□□□□□ -1.12
EPCAM-206ENST00000490733 TDRD9Q8NDG6 1382 aaKnown RBP8.02□□□□□ -1.13
EPCAM-206ENST00000490733 SLC24A1O60721 1099 aa8.02□□□□□ -1.13
EPCAM-206ENST00000490733 DOK7Q18PE1 504 aa8.01□□□□□ -1.13
EPCAM-206ENST00000490733 ANKRD13DQ6ZTN6 518 aa8.01□□□□□ -1.13
EPCAM-206ENST00000490733 PBRM1Q86U86 1689 aa8.01□□□□□ -1.13
EPCAM-206ENST00000490733 EIF4G3O43432 1585 aaKnown RBP8.01□□□□□ -1.13
EPCAM-206ENST00000490733 AQRO60306 1485 aaKnown RBP eCLIP8□□□□□ -1.138e-7■■■□□ 16.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms