RNA–Protein interactions for RNA: ENST00000490178.1

CCZ1B-212, Transcript of CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated, humanhuman

TSL 5

Gene CCZ1B, Length 527 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCZ1B-212ENST00000490178 FAM9AQ8IZU1 332 aaPredicted RBP12.33□□□□□ -0.44
CCZ1B-212ENST00000490178 WDR97A6NE52 1622 aa12.32□□□□□ -0.44
CCZ1B-212ENST00000490178 POLA1P09884 1462 aaPredicted RBP12.32□□□□□ -0.44
CCZ1B-212ENST00000490178 URB2Q14146 1524 aaKnown RBP12.32□□□□□ -0.44
CCZ1B-212ENST00000490178 IGF1RP08069 1367 aa12.3□□□□□ -0.44
CCZ1B-212ENST00000490178 CEP162Q5TB80 1403 aa12.3□□□□□ -0.44
CCZ1B-212ENST00000490178 ST18O60284 1047 aa12.29□□□□□ -0.44
CCZ1B-212ENST00000490178 RAPGEF2Q9Y4G8 1499 aa12.28□□□□□ -0.44
CCZ1B-212ENST00000490178 SLAIN1Q8ND83 568 aa12.28□□□□□ -0.44
CCZ1B-212ENST00000490178 PYGBP11216 843 aa12.27□□□□□ -0.45
CCZ1B-212ENST00000490178 KIF21AQ7Z4S6 1674 aa12.26□□□□□ -0.45
CCZ1B-212ENST00000490178 CDAN1Q8IWY9 1227 aa12.26□□□□□ -0.45
CCZ1B-212ENST00000490178 KLHL34Q8N239 644 aa12.26□□□□□ -0.45
CCZ1B-212ENST00000490178 CUX2O14529 1486 aa12.26□□□□□ -0.45
CCZ1B-212ENST00000490178 PLCG2P16885 1265 aa12.24□□□□□ -0.45
CCZ1B-212ENST00000490178 TARBP1Q13395 1621 aaKnown RBP12.24□□□□□ -0.45
CCZ1B-212ENST00000490178 CUL7Q14999 1698 aa12.24□□□□□ -0.45
CCZ1B-212ENST00000490178 ABCA5Q8WWZ7 1642 aa12.24□□□□□ -0.45
CCZ1B-212ENST00000490178 MRC2Q9UBG0 1479 aa12.24□□□□□ -0.45
CCZ1B-212ENST00000490178 PCDHB8Q9UN66 801 aa12.24□□□□□ -0.45
CCZ1B-212ENST00000490178 WDR62O43379 1518 aa12.23□□□□□ -0.45
CCZ1B-212ENST00000490178 SPOCK2Q92563 424 aa12.23□□□□□ -0.45
CCZ1B-212ENST00000490178 TRIM26Q12899 539 aaPredicted RBP12.2□□□□□ -0.46
CCZ1B-212ENST00000490178 CARMIL1Q5VZK9 1371 aa12.19□□□□□ -0.46
CCZ1B-212ENST00000490178 CLIP1P30622 1438 aa12.19□□□□□ -0.46
CCZ1B-212ENST00000490178 DCAF8Q5TAQ9 597 aa12.18□□□□□ -0.46
CCZ1B-212ENST00000490178 PDCD7Q8N8D1 485 aaKnown RBP12.18□□□□□ -0.46
CCZ1B-212ENST00000490178 OCEL1Q9H607 264 aa12.18□□□□□ -0.46
CCZ1B-212ENST00000490178 RAD54L2Q9Y4B4 1467 aa12.17□□□□□ -0.46
CCZ1B-212ENST00000490178 VPS8Q8N3P4 1428 aa12.17□□□□□ -0.46
CCZ1B-212ENST00000490178 UBTFP17480 764 aaKnown RBP12.16□□□□□ -0.46
CCZ1B-212ENST00000490178 IFT140Q96RY7 1462 aa12.14□□□□□ -0.47
CCZ1B-212ENST00000490178 GAPVD1Q14C86 1478 aa12.13□□□□□ -0.47
CCZ1B-212ENST00000490178 THOC2Q8NI27 1593 aaKnown RBP12.13□□□□□ -0.47
CCZ1B-212ENST00000490178 MAP3K1Q13233 1512 aa12.11□□□□□ -0.47
CCZ1B-212ENST00000490178 AMER1Q5JTC6 1135 aaPredicted RBP12.11□□□□□ -0.47
CCZ1B-212ENST00000490178 ARAP1Q96P48 1450 aa12.09□□□□□ -0.47
CCZ1B-212ENST00000490178 ARHGAP35Q9NRY4 1499 aa12.08□□□□□ -0.47
CCZ1B-212ENST00000490178 EFCAB5A4FU69 1503 aa12.08□□□□□ -0.48
CCZ1B-212ENST00000490178 FHAD1B1AJZ9 1412 aa12.06□□□□□ -0.48
CCZ1B-212ENST00000490178 GRIN2BQ13224 1484 aa12.06□□□□□ -0.48
CCZ1B-212ENST00000490178 GSE1Q14687 1217 aa12.05□□□□□ -0.48
CCZ1B-212ENST00000490178 TMEM121BQ9BXQ6 578 aaPredicted RBP12.05□□□□□ -0.48
CCZ1B-212ENST00000490178 AQRO60306 1485 aaKnown RBP eCLIP12.05□□□□□ -0.48
CCZ1B-212ENST00000490178 CTTNBP2Q8WZ74 1663 aa12.05□□□□□ -0.48
CCZ1B-212ENST00000490178 PBRM1Q86U86 1689 aa12.04□□□□□ -0.48
CCZ1B-212ENST00000490178 ILDR1Q86SU0 546 aaPredicted RBP12.04□□□□□ -0.48
CCZ1B-212ENST00000490178 MARVELD3Q96A59 401 aa12.04□□□□□ -0.48
CCZ1B-212ENST00000490178 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.04□□□□□ -0.48
CCZ1B-212ENST00000490178 CHRM1P11229 460 aaPredicted RBP12.03□□□□□ -0.48
CCZ1B-212ENST00000490178 ADAMTS12P58397 1594 aa12.02□□□□□ -0.49
CCZ1B-212ENST00000490178 PCGF6Q9BYE7 350 aa12.02□□□□□ -0.49
CCZ1B-212ENST00000490178 TDRD9Q8NDG6 1382 aaKnown RBP12.02□□□□□ -0.49
CCZ1B-212ENST00000490178 SAMD9Q5K651 1589 aa12.01□□□□□ -0.49
CCZ1B-212ENST00000490178 SPNS2Q8IVW8 549 aa12.01□□□□□ -0.49
CCZ1B-212ENST00000490178 POTEB3A0JP26 581 aa12□□□□□ -0.49
CCZ1B-212ENST00000490178 POTEBQ6S5H4 581 aa12□□□□□ -0.49
CCZ1B-212ENST00000490178 ZNF467Q7Z7K2 595 aaPredicted RBP12□□□□□ -0.49
CCZ1B-212ENST00000490178 RTN4Q9NQC3 1192 aaKnown RBP12□□□□□ -0.49
CCZ1B-212ENST00000490178 MMRN1Q13201 1228 aa11.99□□□□□ -0.49
CCZ1B-212ENST00000490178 MAGI1Q96QZ7 1491 aaPredicted RBP11.99□□□□□ -0.49
CCZ1B-212ENST00000490178 ERCC6Q03468 1493 aa11.98□□□□□ -0.49
CCZ1B-212ENST00000490178 PKD2Q13563 968 aa11.97□□□□□ -0.49
CCZ1B-212ENST00000490178 CIZ1Q9ULV3 898 aaPredicted RBP11.97□□□□□ -0.49
CCZ1B-212ENST00000490178 PSEN1P49768 467 aa11.96□□□□□ -0.49
CCZ1B-212ENST00000490178 SNPHO15079 494 aa11.95□□□□□ -0.5
CCZ1B-212ENST00000490178 DPY19L2Q6NUT2 758 aa11.95□□□□□ -0.5
CCZ1B-212ENST00000490178 EIF4G3O43432 1585 aaKnown RBP11.95□□□□□ -0.5
CCZ1B-212ENST00000490178 UGGT2Q9NYU1 1516 aa11.95□□□□□ -0.5
CCZ1B-212ENST00000490178 HRCP23327 699 aa11.94□□□□□ -0.5
CCZ1B-212ENST00000490178 ZNF608Q9ULD9 1512 aaPredicted RBP11.94□□□□□ -0.5
CCZ1B-212ENST00000490178 KIAA0586Q9BVV6 1533 aa11.93□□□□□ -0.5
CCZ1B-212ENST00000490178 FYCO1Q9BQS8 1478 aa11.93□□□□□ -0.5
CCZ1B-212ENST00000490178 FMN1Q68DA7 1419 aa11.93□□□□□ -0.5
CCZ1B-212ENST00000490178 CASKIN1Q8WXD9 1431 aa11.93□□□□□ -0.5
CCZ1B-212ENST00000490178 MKRN3Q13064 507 aaKnown RBP11.92□□□□□ -0.5
CCZ1B-212ENST00000490178 KRTAP3-3Q9BYR6 98 aa11.92□□□□□ -0.5
CCZ1B-212ENST00000490178 KRTAP3-2Q9BYR7 98 aa11.92□□□□□ -0.5
CCZ1B-212ENST00000490178 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.92□□□□□ -0.5
CCZ1B-212ENST00000490178 SYNJ2O15056 1496 aa11.9□□□□□ -0.5
CCZ1B-212ENST00000490178 TIAM1Q13009 1591 aa11.9□□□□□ -0.5
CCZ1B-212ENST00000490178 IQGAP2Q13576 1575 aa11.9□□□□□ -0.5
CCZ1B-212ENST00000490178 C3orf67Q6ZVT6 689 aa11.9□□□□□ -0.5
CCZ1B-212ENST00000490178 GRIN2AQ12879 1464 aa11.89□□□□□ -0.51
CCZ1B-212ENST00000490178 SNAPC4Q5SXM2 1469 aa11.89□□□□□ -0.51
CCZ1B-212ENST00000490178 NUP160Q12769 1436 aa11.89□□□□□ -0.51
CCZ1B-212ENST00000490178 RRBP1Q9P2E9 1410 aaKnown RBP11.89□□□□□ -0.51
CCZ1B-212ENST00000490178 L3MBTL3Q96JM7 780 aaPredicted RBP11.89□□□□□ -0.51
CCZ1B-212ENST00000490178 CFAP43Q8NDM7 1665 aa11.89□□□□□ -0.51
CCZ1B-212ENST00000490178 ECM2O94769 699 aaPredicted RBP11.86□□□□□ -0.51
CCZ1B-212ENST00000490178 HOXB3P14651 431 aaPredicted RBP11.86□□□□□ -0.51
CCZ1B-212ENST00000490178 EMP3P54852 163 aa11.86□□□□□ -0.51
CCZ1B-212ENST00000490178 GOLGA2Q08379 1002 aa11.86□□□□□ -0.51
CCZ1B-212ENST00000490178 PDAP1Q13442 181 aaKnown RBP11.86□□□□□ -0.51
CCZ1B-212ENST00000490178 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.86□□□□□ -0.51
CCZ1B-212ENST00000490178 ZEB1P37275 1124 aaPredicted RBP11.85□□□□□ -0.51
CCZ1B-212ENST00000490178 HS3ST6Q96QI5 342 aa11.85□□□□□ -0.51
CCZ1B-212ENST00000490178 LRRC9Q6ZRR7 1453 aa11.84□□□□□ -0.51
CCZ1B-212ENST00000490178 PCF11O94913 1555 aaKnown RBP11.84□□□□□ -0.51
CCZ1B-212ENST00000490178 CABP2Q9NPB3 220 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms