RNA–Protein interactions for RNA: ENST00000489941.6

LMO7-212, Transcript of LIM domain 7, humanhuman

TSL 2

Gene LMO7, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-212ENST00000489941 ABCA5Q8WWZ7 1642 aa9.33□□□□□ -0.92
LMO7-212ENST00000489941 ABCA10Q8WWZ4 1543 aa9.32□□□□□ -0.92
LMO7-212ENST00000489941 STK24Q9Y6E0 443 aa9.32□□□□□ -0.92
LMO7-212ENST00000489941 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.31□□□□□ -0.92
LMO7-212ENST00000489941 IFNL1Q8IU54 200 aa9.31□□□□□ -0.92
LMO7-212ENST00000489941 BBXQ8WY36 941 aaPredicted RBP9.31□□□□□ -0.92
LMO7-212ENST00000489941 ZFP91Q96JP5 570 aaPredicted RBP9.31□□□□□ -0.92
LMO7-212ENST00000489941 SGIP1Q9BQI5 828 aa9.31□□□□□ -0.92
LMO7-212ENST00000489941 PBRM1Q86U86 1689 aa9.31□□□□□ -0.92
LMO7-212ENST00000489941 SOGA1O94964 1423 aa9.31□□□□□ -0.92
LMO7-212ENST00000489941 KIF27Q86VH2 1401 aa9.31□□□□□ -0.92
LMO7-212ENST00000489941 PDAP1Q13442 181 aaKnown RBP9.3□□□□□ -0.92
LMO7-212ENST00000489941 EEA1Q15075 1411 aa9.3□□□□□ -0.92
LMO7-212ENST00000489941 HS6ST3Q8IZP7 471 aa9.29□□□□□ -0.92
LMO7-212ENST00000489941 BCL11BQ9C0K0 894 aaPredicted RBP9.29□□□□□ -0.92
LMO7-212ENST00000489941 PSEN1P49768 467 aa9.28□□□□□ -0.92
LMO7-212ENST00000489941 FAM9AQ8IZU1 332 aaPredicted RBP9.27□□□□□ -0.93
LMO7-212ENST00000489941 CFAP44Q96MT7 982 aa9.27□□□□□ -0.93
LMO7-212ENST00000489941 CUL7Q14999 1698 aa9.26□□□□□ -0.93
LMO7-212ENST00000489941 ZNF608Q9ULD9 1512 aaPredicted RBP9.26□□□□□ -0.93
LMO7-212ENST00000489941 ADAMTS12P58397 1594 aa9.26□□□□□ -0.93
LMO7-212ENST00000489941 FAM163AQ96GL9 167 aaPredicted RBP9.26□□□□□ -0.93
LMO7-212ENST00000489941 MS4A3Q96HJ5 214 aa9.26□□□□□ -0.93
LMO7-212ENST00000489941 PAXIP1Q6ZW49 1069 aaPredicted RBP9.25□□□□□ -0.93
LMO7-212ENST00000489941 GAPVD1Q14C86 1478 aa9.25□□□□□ -0.93
LMO7-212ENST00000489941 RUSC2Q8N2Y8 1516 aa9.25□□□□□ -0.93
LMO7-212ENST00000489941 KIF21BO75037 1637 aa9.23□□□□□ -0.93
LMO7-212ENST00000489941 SNAPC4Q5SXM2 1469 aa9.23□□□□□ -0.93
LMO7-212ENST00000489941 ERICH3Q5RHP9 1530 aa9.23□□□□□ -0.93
LMO7-212ENST00000489941 PLCB2Q00722 1185 aa9.23□□□□□ -0.93
LMO7-212ENST00000489941 METRNQ9UJH8 293 aa9.23□□□□□ -0.93
LMO7-212ENST00000489941 TDRD9Q8NDG6 1382 aaKnown RBP9.23□□□□□ -0.93
LMO7-212ENST00000489941 GRIN2BQ13224 1484 aa9.22□□□□□ -0.93
LMO7-212ENST00000489941 SLC24A1O60721 1099 aa9.22□□□□□ -0.93
LMO7-212ENST00000489941 SPRYD3Q8NCJ5 442 aa9.22□□□□□ -0.93
LMO7-212ENST00000489941 AQRO60306 1485 aaKnown RBP eCLIP9.21□□□□□ -0.93
LMO7-212ENST00000489941 GOLGA2Q08379 1002 aa9.21□□□□□ -0.94
LMO7-212ENST00000489941 GOLGA3Q08378 1498 aa9.21□□□□□ -0.94
LMO7-212ENST00000489941 ASTLQ6HA08 431 aaPredicted RBP9.2□□□□□ -0.94
LMO7-212ENST00000489941 TMEM106CQ9BVX2 250 aa9.2□□□□□ -0.94
LMO7-212ENST00000489941 HAP1P54257 671 aaPredicted RBP9.19□□□□□ -0.94
LMO7-212ENST00000489941 CABP2Q9NPB3 220 aa9.19□□□□□ -0.94
LMO7-212ENST00000489941 MAGI1Q96QZ7 1491 aaPredicted RBP9.19□□□□□ -0.94
LMO7-212ENST00000489941 ATMINO43313 823 aaPredicted RBP9.17□□□□□ -0.94
LMO7-212ENST00000489941 CDAN1Q8IWY9 1227 aa9.16□□□□□ -0.94
LMO7-212ENST00000489941 TRPC6Q9Y210 931 aa9.16□□□□□ -0.94
LMO7-212ENST00000489941 RAPGEF2Q9Y4G8 1499 aa9.15□□□□□ -0.94
LMO7-212ENST00000489941 PRXQ9BXM0 1461 aa9.15□□□□□ -0.95
LMO7-212ENST00000489941 FHAD1B1AJZ9 1412 aa9.14□□□□□ -0.95
LMO7-212ENST00000489941 CHD1O14646 1710 aa9.14□□□□□ -0.95
LMO7-212ENST00000489941 CTTNBP2Q8WZ74 1663 aa9.14□□□□□ -0.95
LMO7-212ENST00000489941 POTEFA5A3E0 1075 aa9.14□□□□□ -0.95
LMO7-212ENST00000489941 C7P10643 843 aa9.14□□□□□ -0.95
LMO7-212ENST00000489941 RYDENQ9NUL5 291 aaKnown RBP9.14□□□□□ -0.95
LMO7-212ENST00000489941 SYNJ2O15056 1496 aa9.14□□□□□ -0.95
LMO7-212ENST00000489941 TIE1P35590 1138 aa9.13□□□□□ -0.95
LMO7-212ENST00000489941 MKRN3Q13064 507 aaKnown RBP9.13□□□□□ -0.95
LMO7-212ENST00000489941 NKX1-1Q15270 411 aaPredicted RBP9.13□□□□□ -0.95
LMO7-212ENST00000489941 MAMSTRQ6ZN01 415 aa9.13□□□□□ -0.95
LMO7-212ENST00000489941 DNAJC5Q9H3Z4 198 aa9.13□□□□□ -0.95
LMO7-212ENST00000489941 GRIN2AQ12879 1464 aa9.13□□□□□ -0.95
LMO7-212ENST00000489941 CARMIL1Q5VZK9 1371 aa9.12□□□□□ -0.95
LMO7-212ENST00000489941 EFCAB3Q8N7B9 438 aa9.12□□□□□ -0.95
LMO7-212ENST00000489941 SLC39A7Q92504 469 aa9.12□□□□□ -0.95
LMO7-212ENST00000489941 IGF1RP08069 1367 aa9.12□□□□□ -0.95
LMO7-212ENST00000489941 TTLL13PA6NNM8 815 aa9.11□□□□□ -0.95
LMO7-212ENST00000489941 BMP2KQ9NSY1 1161 aaPredicted RBP9.11□□□□□ -0.95
LMO7-212ENST00000489941 CEP170Q5SW79 1584 aa9.08□□□□□ -0.96
LMO7-212ENST00000489941 SOX12O15370 315 aa9.08□□□□□ -0.96
LMO7-212ENST00000489941 GTPBP6O43824 516 aaPredicted RBP9.08□□□□□ -0.96
LMO7-212ENST00000489941 TRIM35Q9UPQ4 493 aa9.08□□□□□ -0.96
LMO7-212ENST00000489941 IQGAP2Q13576 1575 aa9.07□□□□□ -0.96
LMO7-212ENST00000489941 UBTFP17480 764 aaKnown RBP9.07□□□□□ -0.96
LMO7-212ENST00000489941 NLRP6P59044 892 aa9.07□□□□□ -0.96
LMO7-212ENST00000489941 PHF8Q9UPP1 1060 aa9.06□□□□□ -0.96
LMO7-212ENST00000489941 CEP162Q5TB80 1403 aa9.05□□□□□ -0.96
LMO7-212ENST00000489941 MMRN1Q13201 1228 aa9.05□□□□□ -0.96
LMO7-212ENST00000489941 CHMP7Q8WUX9 453 aaPredicted RBP9.05□□□□□ -0.96
LMO7-212ENST00000489941 ATN1P54259 1190 aaPredicted RBP9.04□□□□□ -0.96
LMO7-212ENST00000489941 MFRPQ9BY79 579 aa9.04□□□□□ -0.96
LMO7-212ENST00000489941 EFCAB5A4FU69 1503 aa9.04□□□□□ -0.96
LMO7-212ENST00000489941 RANGAP1P46060 587 aaPredicted RBP9.03□□□□□ -0.96
LMO7-212ENST00000489941 SCUBE2Q9NQ36 999 aa9.03□□□□□ -0.96
LMO7-212ENST00000489941 TSHZ2Q9NRE2 1034 aa9.03□□□□□ -0.96
LMO7-212ENST00000489941 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.03□□□□□ -0.962e-9■■■□□ 17.4
LMO7-212ENST00000489941 NUP160Q12769 1436 aa9.03□□□□□ -0.96
LMO7-212ENST00000489941 TNIKQ9UKE5 1360 aa9.02□□□□□ -0.97
LMO7-212ENST00000489941 CLIP1P30622 1438 aa9.02□□□□□ -0.97
LMO7-212ENST00000489941 LOC105371045A0A1W2PR82 267 aa9.01□□□□□ -0.97
LMO7-212ENST00000489941 CLASP1Q7Z460 1538 aa9□□□□□ -0.97
LMO7-212ENST00000489941 SPNS2Q8IVW8 549 aa9□□□□□ -0.97
LMO7-212ENST00000489941 KIAA0556O60303 1618 aa9□□□□□ -0.97
LMO7-212ENST00000489941 SAMD9Q5K651 1589 aa8.99□□□□□ -0.97
LMO7-212ENST00000489941 KIAA0586Q9BVV6 1533 aa8.99□□□□□ -0.97
LMO7-212ENST00000489941 SEC24BO95487 1268 aa8.98□□□□□ -0.97
LMO7-212ENST00000489941 UGGT2Q9NYU1 1516 aa8.97□□□□□ -0.97
LMO7-212ENST00000489941 FBXO22Q8NEZ5 403 aa8.97□□□□□ -0.97
LMO7-212ENST00000489941 FHOD3Q2V2M9 1422 aa8.97□□□□□ -0.97
LMO7-212ENST00000489941 PCF11O94913 1555 aaKnown RBP8.96□□□□□ -0.97
LMO7-212ENST00000489941 SHROOM2Q13796 1616 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms