RNA–Protein interactions for RNA: ENST00000489941.6

LMO7-212, Transcript of LIM domain 7, humanhuman

TSL 2

Gene LMO7, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-212ENST00000489941 AEBP2Q6ZN18 517 aaPredicted RBP19.34■□□□□ 0.69
LMO7-212ENST00000489941 CHIC1Q5VXU3 224 aa17.89■□□□□ 0.45
LMO7-212ENST00000489941 SENP3Q9H4L4 574 aaPredicted RBP16.38■□□□□ 0.21
LMO7-212ENST00000489941 PHF23Q9BUL5 403 aaPredicted RBP16.15■□□□□ 0.18
LMO7-212ENST00000489941 POTEDQ86YR6 584 aa15.76■□□□□ 0.11
LMO7-212ENST00000489941 FOXD1Q16676 465 aa15.51■□□□□ 0.07
LMO7-212ENST00000489941 PLPPR3Q6T4P5 718 aa14.64□□□□□ -0.07
LMO7-212ENST00000489941 MSH5O43196 834 aa14.63□□□□□ -0.07
LMO7-212ENST00000489941 PIAS4Q8N2W9 510 aaPredicted RBP14.18□□□□□ -0.14
LMO7-212ENST00000489941 PPP6R1Q9UPN7 881 aa14□□□□□ -0.17
LMO7-212ENST00000489941 ADRA2BP18089 450 aa13.9□□□□□ -0.18
LMO7-212ENST00000489941 NISCHQ9Y2I1 1504 aa13.09□□□□□ -0.31
LMO7-212ENST00000489941 CACNB1Q02641 598 aaPredicted RBP13.04□□□□□ -0.32
LMO7-212ENST00000489941 MAPK8IP2Q13387 824 aaPredicted RBP12.99□□□□□ -0.33
LMO7-212ENST00000489941 DMRT2Q9Y5R5 561 aa12.94□□□□□ -0.34
LMO7-212ENST00000489941 PPP4R3CPQ6ZMV5 832 aa12.92□□□□□ -0.34
LMO7-212ENST00000489941 SCAF1Q9H7N4 1312 aaKnown RBP12.78□□□□□ -0.36
LMO7-212ENST00000489941 KCNA4P22459 653 aa12.76□□□□□ -0.37
LMO7-212ENST00000489941 NCBP3Q53F19 620 aaKnown RBP12.68□□□□□ -0.38
LMO7-212ENST00000489941 RNF39Q9H2S5 420 aa12.54□□□□□ -0.4
LMO7-212ENST00000489941 CNKSR2Q8WXI2 1034 aa12.52□□□□□ -0.41
LMO7-212ENST00000489941 NPM3O75607 178 aaKnown RBP12.4□□□□□ -0.42
LMO7-212ENST00000489941 DCAF8L1A6NGE4 600 aa12.32□□□□□ -0.44
LMO7-212ENST00000489941 SLC4A1APQ9BWU0 796 aaKnown RBP12.22□□□□□ -0.45
LMO7-212ENST00000489941 RNF216Q9NWF9 866 aaPredicted RBP12.22□□□□□ -0.45
LMO7-212ENST00000489941 C1QBPQ07021 282 aaKnown RBP12.21□□□□□ -0.45
LMO7-212ENST00000489941 HOXD11P31277 338 aaPredicted RBP12.18□□□□□ -0.46
LMO7-212ENST00000489941 POTEHQ6S545 545 aa12.13□□□□□ -0.47
LMO7-212ENST00000489941 EHMT2Q96KQ7 1210 aa12.08□□□□□ -0.48
LMO7-212ENST00000489941 DNAJC5BQ9UF47 199 aa11.88□□□□□ -0.51
LMO7-212ENST00000489941 CSRNP3Q8WYN3 585 aa11.76□□□□□ -0.53
LMO7-212ENST00000489941 FOXD4L1Q9NU39 408 aa11.71□□□□□ -0.53
LMO7-212ENST00000489941 ZBTB22O15209 634 aa11.68□□□□□ -0.54
LMO7-212ENST00000489941 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.68□□□□□ -0.541e-9■□□□□ 11
LMO7-212ENST00000489941 SLC4A2P04920 1241 aa11.64□□□□□ -0.55
LMO7-212ENST00000489941 CCDC180Q9P1Z9 1646 aa11.61□□□□□ -0.55
LMO7-212ENST00000489941 MYCNP04198 464 aaPredicted RBP11.49□□□□□ -0.57
LMO7-212ENST00000489941 DSG3P32926 999 aa11.49□□□□□ -0.57
LMO7-212ENST00000489941 U3KPZ7 1027 aaPredicted RBP11.39□□□□□ -0.59
LMO7-212ENST00000489941 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.38□□□□□ -0.59
LMO7-212ENST00000489941 HNRNPUL2Q1KMD3 747 aaKnown RBP11.38□□□□□ -0.59
LMO7-212ENST00000489941 SPINK5Q9NQ38 1064 aaPredicted RBP11.38□□□□□ -0.59
LMO7-212ENST00000489941 SAMD1Q6SPF0 538 aaPredicted RBP11.32□□□□□ -0.6
LMO7-212ENST00000489941 ATXN8OSP0DMR3 200 aa11.26□□□□□ -0.61
LMO7-212ENST00000489941 CAPN15O75808 1086 aa11.25□□□□□ -0.61
LMO7-212ENST00000489941 APLP2Q06481 763 aa11.25□□□□□ -0.61
LMO7-212ENST00000489941 ATF5Q9Y2D1 282 aaPredicted RBP11.13□□□□□ -0.63
LMO7-212ENST00000489941 ABCC9O60706 1549 aa11.09□□□□□ -0.63
LMO7-212ENST00000489941 TRHP20396 242 aaPredicted RBP11.09□□□□□ -0.63
LMO7-212ENST00000489941 ZNF219Q9P2Y4 722 aaPredicted RBP11.03□□□□□ -0.64
LMO7-212ENST00000489941 ZCCHC6Q5VYS8 1495 aaKnown RBP11.02□□□□□ -0.65
LMO7-212ENST00000489941 ABCB7O75027 752 aa11□□□□□ -0.65
LMO7-212ENST00000489941 SP7Q8TDD2 431 aaPredicted RBP11□□□□□ -0.65
LMO7-212ENST00000489941 CHRDL2Q6WN34 429 aa10.98□□□□□ -0.65
LMO7-212ENST00000489941 POLA2Q14181 598 aa10.89□□□□□ -0.67
LMO7-212ENST00000489941 DCAF1Q9Y4B6 1507 aa10.83□□□□□ -0.68
LMO7-212ENST00000489941 DCAF8L2P0C7V8 631 aa10.81□□□□□ -0.68
LMO7-212ENST00000489941 NACADO15069 1562 aa10.79□□□□□ -0.68
LMO7-212ENST00000489941 RB1CC1Q8TDY2 1594 aa10.78□□□□□ -0.68
LMO7-212ENST00000489941 RBM42Q9BTD8 480 aaKnown RBP10.78□□□□□ -0.68
LMO7-212ENST00000489941 FBLN2P98095 1184 aa10.77□□□□□ -0.69
LMO7-212ENST00000489941 MYO15BQ96JP2 1530 aa10.75□□□□□ -0.69
LMO7-212ENST00000489941 ZBTB12Q9Y330 459 aaPredicted RBP10.72□□□□□ -0.69
LMO7-212ENST00000489941 FKBP8Q14318 412 aa10.71□□□□□ -0.69
LMO7-212ENST00000489941 SCRIBQ14160 1630 aa10.68□□□□□ -0.7
LMO7-212ENST00000489941 MKRN4PQ13434 485 aaPredicted RBP10.63□□□□□ -0.71
LMO7-212ENST00000489941 PIP4P2Q8N4L2 257 aa10.61□□□□□ -0.71
LMO7-212ENST00000489941 SHROOM4Q9ULL8 1493 aa10.59□□□□□ -0.71
LMO7-212ENST00000489941 SPDYE4A6NLX3 237 aa10.56□□□□□ -0.72
LMO7-212ENST00000489941 EVX2Q03828 476 aa10.56□□□□□ -0.72
LMO7-212ENST00000489941 HAX1O00165 279 aa10.52□□□□□ -0.73
LMO7-212ENST00000489941 UNC13AQ9UPW8 1703 aa10.52□□□□□ -0.73
LMO7-212ENST00000489941 OSCARQ8IYS5 282 aa10.5□□□□□ -0.73
LMO7-212ENST00000489941 AKT1S1Q96B36 256 aa10.46□□□□□ -0.73
LMO7-212ENST00000489941 ZNF692Q9BU19 519 aaPredicted RBP10.44□□□□□ -0.74
LMO7-212ENST00000489941 FXR2P51116 673 aaKnown RBP eCLIP10.43□□□□□ -0.744e-7■■□□□ 11.7
LMO7-212ENST00000489941 REM2Q8IYK8 340 aaPredicted RBP10.43□□□□□ -0.74
LMO7-212ENST00000489941 SPDYE2BA6NHP3 402 aa10.41□□□□□ -0.74
LMO7-212ENST00000489941 SPDYE6P0CI01 402 aa10.41□□□□□ -0.74
LMO7-212ENST00000489941 SPDYE2Q495Y8 402 aa10.41□□□□□ -0.74
LMO7-212ENST00000489941 BICRAQ9NZM4 1560 aa10.39□□□□□ -0.75
LMO7-212ENST00000489941 PITPNM1O00562 1244 aa10.34□□□□□ -0.75
LMO7-212ENST00000489941 PABPN1Q86U42 306 aaKnown RBP eCLIP10.32□□□□□ -0.76
LMO7-212ENST00000489941 LHX8Q68G74 356 aa10.3□□□□□ -0.76
LMO7-212ENST00000489941 FBXO3Q9UK99 471 aa10.3□□□□□ -0.76
LMO7-212ENST00000489941 SSUH2Q9Y2M2 353 aa10.28□□□□□ -0.76
LMO7-212ENST00000489941 PROM2Q8N271 834 aa10.24□□□□□ -0.77
LMO7-212ENST00000489941 PLSCR2Q9NRY7 297 aa10.22□□□□□ -0.77
LMO7-212ENST00000489941 BAZ1AQ9NRL2 1556 aaPredicted RBP10.18□□□□□ -0.78
LMO7-212ENST00000489941 SMARCA4P51532 1647 aa10.17□□□□□ -0.78
LMO7-212ENST00000489941 CECR2Q9BXF3 1484 aa10.16□□□□□ -0.78
LMO7-212ENST00000489941 EIF4G1Q04637 1599 aaKnown RBP10.15□□□□□ -0.78
LMO7-212ENST00000489941 GABBR2O75899 941 aa10.15□□□□□ -0.78
LMO7-212ENST00000489941 STAG3Q9UJ98 1225 aa10.15□□□□□ -0.78
LMO7-212ENST00000489941 CLEC11AQ9Y240 323 aa10.12□□□□□ -0.79
LMO7-212ENST00000489941 MROH2BQ7Z745 1585 aa10.11□□□□□ -0.79
LMO7-212ENST00000489941 C19orf67A6NJJ6 358 aa10.11□□□□□ -0.79
LMO7-212ENST00000489941 VASPP50552 380 aaPredicted RBP10.11□□□□□ -0.79
LMO7-212ENST00000489941 SPDYE1Q8NFV5 336 aaPredicted RBP10.11□□□□□ -0.79
LMO7-212ENST00000489941 PLCD3Q8N3E9 789 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms