RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 SIN3AQ96ST3 1273 aa21.44■■□□□ 1.02
COL9A1-208ENST00000489611 PPP1R15AO75807 674 aaPredicted RBP21.43■■□□□ 1.02
COL9A1-208ENST00000489611 TONSLQ96HA7 1378 aa21.43■■□□□ 1.02
COL9A1-208ENST00000489611 UHRF1BP1LA0JNW5 1464 aa21.41■■□□□ 1.02
COL9A1-208ENST00000489611 DAPK1P53355 1430 aa21.39■■□□□ 1.02
COL9A1-208ENST00000489611 KIF14Q15058 1648 aa21.37■■□□□ 1.01
COL9A1-208ENST00000489611 KDM5BQ9UGL1 1544 aa21.35■■□□□ 1.01
COL9A1-208ENST00000489611 ABCC5O15440 1437 aa21.33■■□□□ 1
COL9A1-208ENST00000489611 RRP7BPQ9NSQ0 103 aa21.33■■□□□ 1
COL9A1-208ENST00000489611 ZCCHC11Q5TAX3 1644 aaKnown RBP21.32■■□□□ 1
COL9A1-208ENST00000489611 ADGBQ8N7X0 1667 aa21.31■■□□□ 1
COL9A1-208ENST00000489611 CHIC2Q9UKJ5 165 aa21.29■■□□□ 1
COL9A1-208ENST00000489611 GPATCH8Q9UKJ3 1502 aaKnown RBP21.29■■□□□ 1
COL9A1-208ENST00000489611 CAMSAP2Q08AD1 1489 aa21.29■■□□□ 1
COL9A1-208ENST00000489611 ABCC10Q5T3U5 1492 aa21.28■■□□□ 1
COL9A1-208ENST00000489611 KCNH8Q96L42 1107 aa21.28■■□□□ 1
COL9A1-208ENST00000489611 YTHDC1Q96MU7 727 aaKnown RBP21.28■■□□□ 1
COL9A1-208ENST00000489611 GTF3C3Q9Y5Q9 886 aa21.28■■□□□ 1
COL9A1-208ENST00000489611 CROCC2H7BZ55 1655 aa21.27■■□□□ 1
COL9A1-208ENST00000489611 ZNF644Q9H582 1327 aaPredicted RBP21.27■■□□□ 1
COL9A1-208ENST00000489611 CFDP1Q9UEE9 299 aaPredicted RBP21.27■■□□□ 1
COL9A1-208ENST00000489611 KDM6BO15054 1643 aa21.27■□□□□ 0.99
COL9A1-208ENST00000489611 ADGRL2O95490 1459 aa21.26■□□□□ 0.99
COL9A1-208ENST00000489611 TRIM52Q96A61 297 aa21.25■□□□□ 0.99
COL9A1-208ENST00000489611 MPHOSPH9Q99550 1183 aa21.24■□□□□ 0.99
COL9A1-208ENST00000489611 DENND4BO75064 1496 aaPredicted RBP21.24■□□□□ 0.99
COL9A1-208ENST00000489611 CYB5RLQ6IPT4 315 aa21.23■□□□□ 0.99
COL9A1-208ENST00000489611 ZNF777Q9ULD5 760 aaPredicted RBP21.23■□□□□ 0.99
COL9A1-208ENST00000489611 RIMBP3CA6NJZ7 1639 aa21.21■□□□□ 0.99
COL9A1-208ENST00000489611 RIMBP3BA6NNM3 1639 aa21.21■□□□□ 0.99
COL9A1-208ENST00000489611 RIMBP3Q9UFD9 1639 aa21.21■□□□□ 0.99
COL9A1-208ENST00000489611 CDC42BPAQ5VT25 1732 aa21.21■□□□□ 0.99
COL9A1-208ENST00000489611 SHANK2Q9UPX8 1470 aa21.21■□□□□ 0.99
COL9A1-208ENST00000489611 NCOA1Q15788 1441 aa21.2■□□□□ 0.98
COL9A1-208ENST00000489611 NPM1P06748 294 aaKnown RBP eCLIP21.19■□□□□ 0.98
COL9A1-208ENST00000489611 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.19■□□□□ 0.98
COL9A1-208ENST00000489611 ANKRD30AQ9BXX3 1397 aa21.17■□□□□ 0.98
COL9A1-208ENST00000489611 TTC37Q6PGP7 1564 aa21.17■□□□□ 0.98
COL9A1-208ENST00000489611 WDR7Q9Y4E6 1490 aa21.17■□□□□ 0.98
COL9A1-208ENST00000489611 ASXL2Q76L83 1435 aa21.16■□□□□ 0.98
COL9A1-208ENST00000489611 RPRD2Q5VT52 1461 aaKnown RBP21.16■□□□□ 0.98
COL9A1-208ENST00000489611 ANKRD30BQ9BXX2 1392 aa21.15■□□□□ 0.98
COL9A1-208ENST00000489611 ARHGEF5Q12774 1597 aa21.13■□□□□ 0.97
COL9A1-208ENST00000489611 DDX10Q13206 875 aaKnown RBP21.12■□□□□ 0.97
COL9A1-208ENST00000489611 PELP1Q8IZL8 1130 aaKnown RBP21.1■□□□□ 0.97
COL9A1-208ENST00000489611 PREX2Q70Z35 1606 aa21.09■□□□□ 0.97
COL9A1-208ENST00000489611 CDC42BPBQ9Y5S2 1711 aa21.09■□□□□ 0.97
COL9A1-208ENST00000489611 CCER2I3L3R5 266 aa21.08■□□□□ 0.97
COL9A1-208ENST00000489611 RSPH4AQ5TD94 716 aa21.08■□□□□ 0.97
COL9A1-208ENST00000489611 SLC4A1APQ9BWU0 796 aaKnown RBP21.08■□□□□ 0.97
COL9A1-208ENST00000489611 ARHGAP5Q13017 1502 aa21.08■□□□□ 0.96
COL9A1-208ENST00000489611 PZPP20742 1482 aa21.06■□□□□ 0.96
COL9A1-208ENST00000489611 HNRNPMP52272 730 aaKnown RBP eCLIP21.06■□□□□ 0.96
COL9A1-208ENST00000489611 PLCH2O75038 1416 aa21.06■□□□□ 0.96
COL9A1-208ENST00000489611 C9orf84Q5VXU9 1444 aa21.05■□□□□ 0.96
COL9A1-208ENST00000489611 ANKRD50Q9ULJ7 1429 aa21.05■□□□□ 0.96
COL9A1-208ENST00000489611 ANP32CO43423 234 aa21.05■□□□□ 0.96
COL9A1-208ENST00000489611 MYO5CQ9NQX4 1742 aa21.04■□□□□ 0.96
COL9A1-208ENST00000489611 SAMD9LQ8IVG5 1584 aa21.04■□□□□ 0.96
COL9A1-208ENST00000489611 TEX14Q8IWB6 1497 aa21.03■□□□□ 0.96
COL9A1-208ENST00000489611 KIAA1107Q9UPP5 1409 aa21.03■□□□□ 0.96
COL9A1-208ENST00000489611 KDM5DQ9BY66 1539 aa21.03■□□□□ 0.96
COL9A1-208ENST00000489611 TSPY4P0CV99 314 aa21.03■□□□□ 0.96
COL9A1-208ENST00000489611 TSPY10P0CW01 314 aa21.03■□□□□ 0.96
COL9A1-208ENST00000489611 EIF4G2P78344 907 aaKnown RBP eCLIP21.02■□□□□ 0.96
COL9A1-208ENST00000489611 L3MBTL2Q969R5 705 aa21.01■□□□□ 0.95
COL9A1-208ENST00000489611 EFCAB2Q5VUJ9 269 aa21■□□□□ 0.95
COL9A1-208ENST00000489611 MBD5Q9P267 1494 aa21■□□□□ 0.95
COL9A1-208ENST00000489611 CCDC141Q6ZP82 1450 aa20.99■□□□□ 0.95
COL9A1-208ENST00000489611 ABCA9Q8IUA7 1624 aa20.99■□□□□ 0.95
COL9A1-208ENST00000489611 PLEKHH2Q8IVE3 1493 aa20.98■□□□□ 0.95
COL9A1-208ENST00000489611 SYCP2Q9BX26 1530 aa20.97■□□□□ 0.95
COL9A1-208ENST00000489611 MAST1Q9Y2H9 1570 aa20.96■□□□□ 0.95
COL9A1-208ENST00000489611 POLR1AO95602 1720 aaPredicted RBP20.94■□□□□ 0.94
COL9A1-208ENST00000489611 HSPA5P11021 654 aaKnown RBP20.94■□□□□ 0.94
COL9A1-208ENST00000489611 HIRIP3Q9BW71 556 aaPredicted RBP20.94■□□□□ 0.94
COL9A1-208ENST00000489611 ARHGEF12Q9NZN5 1544 aa20.94■□□□□ 0.94
COL9A1-208ENST00000489611 FOXD1Q16676 465 aa20.94■□□□□ 0.94
COL9A1-208ENST00000489611 DNAJC5Q9H3Z4 198 aa20.94■□□□□ 0.94
COL9A1-208ENST00000489611 ARAP3Q8WWN8 1544 aa20.93■□□□□ 0.94
COL9A1-208ENST00000489611 FANCAO15360 1455 aa20.92■□□□□ 0.94
COL9A1-208ENST00000489611 KIF15Q9NS87 1388 aa20.92■□□□□ 0.94
COL9A1-208ENST00000489611 CD109Q6YHK3 1445 aa20.91■□□□□ 0.94
COL9A1-208ENST00000489611 PKD2Q13563 968 aa20.89■□□□□ 0.93
COL9A1-208ENST00000489611 NUP155O75694 1391 aa20.89■□□□□ 0.93
COL9A1-208ENST00000489611 ABCC1P33527 1531 aa20.89■□□□□ 0.93
COL9A1-208ENST00000489611 PLXNC1O60486 1568 aa20.88■□□□□ 0.93
COL9A1-208ENST00000489611 TRAPPC8Q9Y2L5 1435 aa20.87■□□□□ 0.93
COL9A1-208ENST00000489611 WASHC2AQ641Q2 1341 aa20.87■□□□□ 0.93
COL9A1-208ENST00000489611 SPATA31E1Q6ZUB1 1445 aa20.86■□□□□ 0.93
COL9A1-208ENST00000489611 AFAP1Q8N556 730 aa20.85■□□□□ 0.93
COL9A1-208ENST00000489611 CNTLNQ9NXG0 1405 aa20.85■□□□□ 0.93
COL9A1-208ENST00000489611 UHRF1BP1Q6BDS2 1440 aa20.84■□□□□ 0.93
COL9A1-208ENST00000489611 FAM69CQ0P6D2 419 aa20.83■□□□□ 0.93
COL9A1-208ENST00000489611 ADGRL1O94910 1474 aa20.83■□□□□ 0.92
COL9A1-208ENST00000489611 UNC13BO14795 1591 aa20.83■□□□□ 0.92
COL9A1-208ENST00000489611 NBPF8Q3BBV2 869 aa20.82■□□□□ 0.92
COL9A1-208ENST00000489611 CCDC7Q96M83 1385 aa20.82■□□□□ 0.92
COL9A1-208ENST00000489611 SCAPERQ9BY12 1400 aa20.82■□□□□ 0.92
COL9A1-208ENST00000489611 ARID4BQ4LE39 1312 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms