RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 ABCA8O94911 1581 aa12.65□□□□□ -0.38
CSMD2-209ENST00000489419 DNMT1P26358 1616 aaKnown RBP12.65□□□□□ -0.38
CSMD2-209ENST00000489419 TONSLQ96HA7 1378 aa12.64□□□□□ -0.39
CSMD2-209ENST00000489419 RRP7BPQ9NSQ0 103 aa12.64□□□□□ -0.39
CSMD2-209ENST00000489419 ABCC5O15440 1437 aa12.64□□□□□ -0.39
CSMD2-209ENST00000489419 ITSN2Q9NZM3 1697 aa12.63□□□□□ -0.39
CSMD2-209ENST00000489419 ARID3CA6NKF2 412 aa12.63□□□□□ -0.39
CSMD2-209ENST00000489419 PRG4Q92954 1404 aaPredicted RBP12.63□□□□□ -0.39
CSMD2-209ENST00000489419 CHIC2Q9UKJ5 165 aa12.63□□□□□ -0.39
CSMD2-209ENST00000489419 EIF5BO60841 1220 aaKnown RBP12.62□□□□□ -0.39
CSMD2-209ENST00000489419 GPATCH8Q9UKJ3 1502 aaKnown RBP12.62□□□□□ -0.39
CSMD2-209ENST00000489419 PLEKHD1A6NEE1 506 aa12.6□□□□□ -0.39
CSMD2-209ENST00000489419 CFDP1Q9UEE9 299 aaPredicted RBP12.6□□□□□ -0.39
CSMD2-209ENST00000489419 ATP10BO94823 1461 aa12.59□□□□□ -0.39
CSMD2-209ENST00000489419 TRIM52Q96A61 297 aa12.58□□□□□ -0.4
CSMD2-209ENST00000489419 MPHOSPH9Q99550 1183 aa12.58□□□□□ -0.4
CSMD2-209ENST00000489419 CAMSAP2Q08AD1 1489 aa12.58□□□□□ -0.4
CSMD2-209ENST00000489419 PTPRGP23470 1445 aa12.58□□□□□ -0.4
CSMD2-209ENST00000489419 DENND4BO75064 1496 aaPredicted RBP12.57□□□□□ -0.4
CSMD2-209ENST00000489419 ADGRL2O95490 1459 aa12.57□□□□□ -0.4
CSMD2-209ENST00000489419 KDM6BO15054 1643 aa12.57□□□□□ -0.4
CSMD2-209ENST00000489419 ZNF644Q9H582 1327 aaPredicted RBP12.57□□□□□ -0.4
CSMD2-209ENST00000489419 ABCC10Q5T3U5 1492 aa12.56□□□□□ -0.4
CSMD2-209ENST00000489419 KIF14Q15058 1648 aa12.56□□□□□ -0.4
CSMD2-209ENST00000489419 NCOA1Q15788 1441 aa12.55□□□□□ -0.4
CSMD2-209ENST00000489419 SHROOM2Q13796 1616 aa12.55□□□□□ -0.4
CSMD2-209ENST00000489419 ADGBQ8N7X0 1667 aa12.54□□□□□ -0.4
CSMD2-209ENST00000489419 KDM5BQ9UGL1 1544 aa12.54□□□□□ -0.4
CSMD2-209ENST00000489419 CHD1O14646 1710 aa12.53□□□□□ -0.4
CSMD2-209ENST00000489419 YTHDC1Q96MU7 727 aaKnown RBP12.53□□□□□ -0.4
CSMD2-209ENST00000489419 SHANK2Q9UPX8 1470 aa12.53□□□□□ -0.4
CSMD2-209ENST00000489419 ANKRD30AQ9BXX3 1397 aa12.52□□□□□ -0.4
CSMD2-209ENST00000489419 CROCC2H7BZ55 1655 aa12.52□□□□□ -0.4
CSMD2-209ENST00000489419 ANKRD30BQ9BXX2 1392 aa12.52□□□□□ -0.41
CSMD2-209ENST00000489419 GTF3C3Q9Y5Q9 886 aa12.52□□□□□ -0.41
CSMD2-209ENST00000489419 CDC42BPAQ5VT25 1732 aa12.51□□□□□ -0.41
CSMD2-209ENST00000489419 RPRD2Q5VT52 1461 aaKnown RBP12.49□□□□□ -0.41
CSMD2-209ENST00000489419 RSPH4AQ5TD94 716 aa12.49□□□□□ -0.41
CSMD2-209ENST00000489419 ARHGEF5Q12774 1597 aa12.48□□□□□ -0.41
CSMD2-209ENST00000489419 DDX10Q13206 875 aaKnown RBP12.48□□□□□ -0.41
CSMD2-209ENST00000489419 SLC4A1APQ9BWU0 796 aaKnown RBP12.48□□□□□ -0.41
CSMD2-209ENST00000489419 ZNF777Q9ULD5 760 aaPredicted RBP12.48□□□□□ -0.41
CSMD2-209ENST00000489419 PZPP20742 1482 aa12.47□□□□□ -0.41
CSMD2-209ENST00000489419 TSPY4P0CV99 314 aa12.46□□□□□ -0.41
CSMD2-209ENST00000489419 TSPY10P0CW01 314 aa12.46□□□□□ -0.41
CSMD2-209ENST00000489419 ANKRD50Q9ULJ7 1429 aa12.46□□□□□ -0.42
CSMD2-209ENST00000489419 C9orf84Q5VXU9 1444 aa12.45□□□□□ -0.42
CSMD2-209ENST00000489419 L3MBTL2Q969R5 705 aa12.45□□□□□ -0.42
CSMD2-209ENST00000489419 ANP32EQ9BTT0 268 aa12.45□□□□□ -0.42
CSMD2-209ENST00000489419 ABCC2Q92887 1545 aa12.45□□□□□ -0.42
CSMD2-209ENST00000489419 CCER2I3L3R5 266 aa12.45□□□□□ -0.42
CSMD2-209ENST00000489419 KIAA1107Q9UPP5 1409 aa12.44□□□□□ -0.42
CSMD2-209ENST00000489419 MBD5Q9P267 1494 aa12.43□□□□□ -0.42
CSMD2-209ENST00000489419 PREX2Q70Z35 1606 aa12.43□□□□□ -0.42
CSMD2-209ENST00000489419 CLASP1Q7Z460 1538 aa12.43□□□□□ -0.42
CSMD2-209ENST00000489419 UHRF1BP1LA0JNW5 1464 aa12.43□□□□□ -0.42
CSMD2-209ENST00000489419 TEX14Q8IWB6 1497 aa12.42□□□□□ -0.42
CSMD2-209ENST00000489419 EIF4G2P78344 907 aaKnown RBP eCLIP12.42□□□□□ -0.42
CSMD2-209ENST00000489419 KDM5DQ9BY66 1539 aa12.42□□□□□ -0.42
CSMD2-209ENST00000489419 ANP32CO43423 234 aa12.41□□□□□ -0.42
CSMD2-209ENST00000489419 CCDC141Q6ZP82 1450 aa12.41□□□□□ -0.42
CSMD2-209ENST00000489419 FOXD1Q16676 465 aa12.41□□□□□ -0.42
CSMD2-209ENST00000489419 CDC42BPBQ9Y5S2 1711 aa12.4□□□□□ -0.42
CSMD2-209ENST00000489419 PLEKHH2Q8IVE3 1493 aa12.4□□□□□ -0.42
CSMD2-209ENST00000489419 HIRIP3Q9BW71 556 aaPredicted RBP12.4□□□□□ -0.42
CSMD2-209ENST00000489419 SAMD9LQ8IVG5 1584 aa12.39□□□□□ -0.43
CSMD2-209ENST00000489419 HSPA5P11021 654 aaKnown RBP12.39□□□□□ -0.43
CSMD2-209ENST00000489419 MAST1Q9Y2H9 1570 aa12.39□□□□□ -0.43
CSMD2-209ENST00000489419 KIF15Q9NS87 1388 aa12.38□□□□□ -0.43
CSMD2-209ENST00000489419 HNRNPMP52272 730 aaKnown RBP eCLIP12.38□□□□□ -0.43
CSMD2-209ENST00000489419 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.38□□□□□ -0.43
CSMD2-209ENST00000489419 ERCC6L2Q5T890 1561 aa12.38□□□□□ -0.43
CSMD2-209ENST00000489419 PKD2Q13563 968 aa12.38□□□□□ -0.43
CSMD2-209ENST00000489419 NUP155O75694 1391 aa12.37□□□□□ -0.43
CSMD2-209ENST00000489419 PLEKHG5O94827 1062 aa12.35□□□□□ -0.43
CSMD2-209ENST00000489419 NBPF8Q3BBV2 869 aa12.35□□□□□ -0.43
CSMD2-209ENST00000489419 ARHGAP5Q13017 1502 aa12.35□□□□□ -0.43
CSMD2-209ENST00000489419 TTC37Q6PGP7 1564 aa12.35□□□□□ -0.43
CSMD2-209ENST00000489419 MYO5CQ9NQX4 1742 aa12.34□□□□□ -0.43
CSMD2-209ENST00000489419 PLCH2O75038 1416 aa12.34□□□□□ -0.43
CSMD2-209ENST00000489419 SPATA31E1Q6ZUB1 1445 aa12.34□□□□□ -0.43
CSMD2-209ENST00000489419 SOCS7O14512 581 aa12.33□□□□□ -0.43
CSMD2-209ENST00000489419 WASHC2AQ641Q2 1341 aa12.33□□□□□ -0.43
CSMD2-209ENST00000489419 UBE2Q2Q8WVN8 375 aa12.33□□□□□ -0.43
CSMD2-209ENST00000489419 ZCCHC11Q5TAX3 1644 aaKnown RBP12.32□□□□□ -0.44
CSMD2-209ENST00000489419 ARHGEF12Q9NZN5 1544 aa12.32□□□□□ -0.44
CSMD2-209ENST00000489419 UHRF1BP1Q6BDS2 1440 aa12.32□□□□□ -0.44
CSMD2-209ENST00000489419 PLXNC1O60486 1568 aa12.32□□□□□ -0.44
CSMD2-209ENST00000489419 SYCP2Q9BX26 1530 aa12.32□□□□□ -0.44
CSMD2-209ENST00000489419 EFCAB2Q5VUJ9 269 aa12.31□□□□□ -0.44
CSMD2-209ENST00000489419 KCNH8Q96L42 1107 aa12.31□□□□□ -0.44
CSMD2-209ENST00000489419 ARAP3Q8WWN8 1544 aa12.31□□□□□ -0.44
CSMD2-209ENST00000489419 CCDC7Q96M83 1385 aa12.31□□□□□ -0.44
CSMD2-209ENST00000489419 CNTLNQ9NXG0 1405 aa12.29□□□□□ -0.44
CSMD2-209ENST00000489419 UNC13BO14795 1591 aa12.29□□□□□ -0.44
CSMD2-209ENST00000489419 FAM135AQ9P2D6 1515 aa12.29□□□□□ -0.44
CSMD2-209ENST00000489419 ARID4BQ4LE39 1312 aaPredicted RBP12.28□□□□□ -0.44
CSMD2-209ENST00000489419 DUOX2Q9NRD8 1548 aa12.28□□□□□ -0.44
CSMD2-209ENST00000489419 POLR1AO95602 1720 aaPredicted RBP12.28□□□□□ -0.44
CSMD2-209ENST00000489419 ERBINQ96RT1 1412 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms