RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 IRX6P78412 446 aaPredicted RBP17.84■□□□□ 0.45
CLIC4-202ENST00000488683 L3MBTL2Q969R5 705 aa17.83■□□□□ 0.45
CLIC4-202ENST00000488683 C11orf95C9JLR9 678 aaPredicted RBP17.83■□□□□ 0.44
CLIC4-202ENST00000488683 TSHZ2Q9NRE2 1034 aa17.83■□□□□ 0.44
CLIC4-202ENST00000488683 ABCC5O15440 1437 aa17.83■□□□□ 0.44
CLIC4-202ENST00000488683 CCER2I3L3R5 266 aa17.82■□□□□ 0.44
CLIC4-202ENST00000488683 CCDC184Q52MB2 194 aa17.82■□□□□ 0.44
CLIC4-202ENST00000488683 DNMT1P26358 1616 aaKnown RBP17.82■□□□□ 0.44
CLIC4-202ENST00000488683 WASHC2AQ641Q2 1341 aa17.82■□□□□ 0.44
CLIC4-202ENST00000488683 SENP3-EIF4A1A0A087X0R7 540 aa17.81■□□□□ 0.44
CLIC4-202ENST00000488683 CEP170Q5SW79 1584 aa17.8■□□□□ 0.44
CLIC4-202ENST00000488683 PRG4Q92954 1404 aaPredicted RBP17.79■□□□□ 0.44
CLIC4-202ENST00000488683 PLB1Q6P1J6 1458 aa17.78■□□□□ 0.44
CLIC4-202ENST00000488683 ERCC6Q03468 1493 aa17.78■□□□□ 0.44
CLIC4-202ENST00000488683 ROCK1Q13464 1354 aa17.77■□□□□ 0.44
CLIC4-202ENST00000488683 NBPF8Q3BBV2 869 aa17.77■□□□□ 0.44
CLIC4-202ENST00000488683 ZNF326Q5BKZ1 582 aaKnown RBP17.77■□□□□ 0.43
CLIC4-202ENST00000488683 HNRNPUQ00839 825 aaKnown RBP eCLIP17.76■□□□□ 0.43
CLIC4-202ENST00000488683 MAGI1Q96QZ7 1491 aaPredicted RBP17.75■□□□□ 0.43
CLIC4-202ENST00000488683 CHMP7Q8WUX9 453 aaPredicted RBP17.75■□□□□ 0.43
CLIC4-202ENST00000488683 POLR3GLQ9BT43 218 aa17.75■□□□□ 0.43
CLIC4-202ENST00000488683 KIF14Q15058 1648 aa17.75■□□□□ 0.43
CLIC4-202ENST00000488683 ANKRD30BQ9BXX2 1392 aa17.74■□□□□ 0.43
CLIC4-202ENST00000488683 SLC4A1APQ9BWU0 796 aaKnown RBP17.74■□□□□ 0.43
CLIC4-202ENST00000488683 SYNJ2O15056 1496 aa17.73■□□□□ 0.43
CLIC4-202ENST00000488683 TROQ12816 1431 aaPredicted RBP17.73■□□□□ 0.43
CLIC4-202ENST00000488683 CDK11AQ9UQ88 783 aaPredicted RBP17.72■□□□□ 0.43
CLIC4-202ENST00000488683 CAMSAP2Q08AD1 1489 aa17.72■□□□□ 0.43
CLIC4-202ENST00000488683 RPRD2Q5VT52 1461 aaKnown RBP17.71■□□□□ 0.43
CLIC4-202ENST00000488683 TEX14Q8IWB6 1497 aa17.7■□□□□ 0.42
CLIC4-202ENST00000488683 EIF4G2P78344 907 aaKnown RBP eCLIP17.7■□□□□ 0.428e-7■■■■■ 28.7
CLIC4-202ENST00000488683 GPATCH8Q9UKJ3 1502 aaKnown RBP17.7■□□□□ 0.42
CLIC4-202ENST00000488683 FAM9BQ8IZU0 186 aa17.69■□□□□ 0.42
CLIC4-202ENST00000488683 CFDP1Q9UEE9 299 aaPredicted RBP17.69■□□□□ 0.42
CLIC4-202ENST00000488683 ITSN2Q9NZM3 1697 aa17.67■□□□□ 0.42
CLIC4-202ENST00000488683 JPH4Q96JJ6 628 aa17.67■□□□□ 0.42
CLIC4-202ENST00000488683 PZPP20742 1482 aa17.67■□□□□ 0.42
CLIC4-202ENST00000488683 ADCY10Q96PN6 1610 aa17.67■□□□□ 0.42
CLIC4-202ENST00000488683 NUP160Q12769 1436 aa17.66■□□□□ 0.42
CLIC4-202ENST00000488683 NEFLP07196 543 aa17.66■□□□□ 0.42
CLIC4-202ENST00000488683 NCOA1Q15788 1441 aa17.66■□□□□ 0.42
CLIC4-202ENST00000488683 ADGBQ8N7X0 1667 aa17.65■□□□□ 0.42
CLIC4-202ENST00000488683 CROCC2H7BZ55 1655 aa17.64■□□□□ 0.42
CLIC4-202ENST00000488683 CARMIL2Q6F5E8 1435 aa17.62■□□□□ 0.41
CLIC4-202ENST00000488683 CNTLNQ9NXG0 1405 aa17.62■□□□□ 0.41
CLIC4-202ENST00000488683 CCDC7Q96M83 1385 aa17.61■□□□□ 0.41
CLIC4-202ENST00000488683 CDC42BPAQ5VT25 1732 aa17.61■□□□□ 0.41
CLIC4-202ENST00000488683 ADGRL2O95490 1459 aa17.59■□□□□ 0.41
CLIC4-202ENST00000488683 ABCA8O94911 1581 aa17.59■□□□□ 0.41
CLIC4-202ENST00000488683 SPATA31E1Q6ZUB1 1445 aa17.59■□□□□ 0.41
CLIC4-202ENST00000488683 PKD2Q13563 968 aa17.58■□□□□ 0.41
CLIC4-202ENST00000488683 ATP10BO94823 1461 aa17.57■□□□□ 0.4
CLIC4-202ENST00000488683 KIF7Q2M1P5 1343 aa17.57■□□□□ 0.4
CLIC4-202ENST00000488683 MRS2Q9HD23 443 aa17.57■□□□□ 0.4
CLIC4-202ENST00000488683 KDM2AQ9Y2K7 1162 aa17.57■□□□□ 0.4
CLIC4-202ENST00000488683 ABCC10Q5T3U5 1492 aa17.56■□□□□ 0.4
CLIC4-202ENST00000488683 PRKRIP1Q9H875 184 aaPredicted RBP17.56■□□□□ 0.4
CLIC4-202ENST00000488683 HNRNPMP52272 730 aaKnown RBP eCLIP17.55■□□□□ 0.4
CLIC4-202ENST00000488683 KIAA1107Q9UPP5 1409 aa17.55■□□□□ 0.4
CLIC4-202ENST00000488683 MBD5Q9P267 1494 aa17.54■□□□□ 0.4
CLIC4-202ENST00000488683 POLR1AO95602 1720 aaPredicted RBP17.54■□□□□ 0.4
CLIC4-202ENST00000488683 ANKRD30AQ9BXX3 1397 aa17.54■□□□□ 0.4
CLIC4-202ENST00000488683 ANKRD50Q9ULJ7 1429 aa17.53■□□□□ 0.4
CLIC4-202ENST00000488683 PLEKHD1A6NEE1 506 aa17.53■□□□□ 0.4
CLIC4-202ENST00000488683 C9orf84Q5VXU9 1444 aa17.5■□□□□ 0.39
CLIC4-202ENST00000488683 BCORL1Q5H9F3 1711 aa17.49■□□□□ 0.39
CLIC4-202ENST00000488683 RBM19Q9Y4C8 960 aaKnown RBP17.49■□□□□ 0.39
CLIC4-202ENST00000488683 MYT1Q01538 1121 aa17.49■□□□□ 0.39
CLIC4-202ENST00000488683 SHANK2Q9UPX8 1470 aa17.47■□□□□ 0.39
CLIC4-202ENST00000488683 NUP155O75694 1391 aa17.47■□□□□ 0.39
CLIC4-202ENST00000488683 USP47Q96K76 1375 aa17.45■□□□□ 0.38
CLIC4-202ENST00000488683 KDM5CP41229 1560 aa17.43■□□□□ 0.38
CLIC4-202ENST00000488683 CDC42BPBQ9Y5S2 1711 aa17.43■□□□□ 0.38
CLIC4-202ENST00000488683 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.43■□□□□ 0.383e-6■■□□□ 11.6
CLIC4-202ENST00000488683 PTPRGP23470 1445 aa17.43■□□□□ 0.38
CLIC4-202ENST00000488683 RGL3Q3MIN7 710 aa17.42■□□□□ 0.38
CLIC4-202ENST00000488683 KIF15Q9NS87 1388 aa17.42■□□□□ 0.38
CLIC4-202ENST00000488683 SAMD9LQ8IVG5 1584 aa17.42■□□□□ 0.38
CLIC4-202ENST00000488683 B4GALNT3Q6L9W6 998 aa17.41■□□□□ 0.38
CLIC4-202ENST00000488683 DCAF11Q8TEB1 546 aa17.41■□□□□ 0.38
CLIC4-202ENST00000488683 TSPY4P0CV99 314 aa17.41■□□□□ 0.38
CLIC4-202ENST00000488683 TSPY10P0CW01 314 aa17.41■□□□□ 0.38
CLIC4-202ENST00000488683 DHX29Q7Z478 1369 aaKnown RBP17.41■□□□□ 0.38
CLIC4-202ENST00000488683 KDM5DQ9BY66 1539 aa17.4■□□□□ 0.38
CLIC4-202ENST00000488683 CHD1O14646 1710 aa17.4■□□□□ 0.38
CLIC4-202ENST00000488683 ARHGEF5Q12774 1597 aa17.4■□□□□ 0.38
CLIC4-202ENST00000488683 CARD11Q9BXL7 1154 aa17.39■□□□□ 0.37
CLIC4-202ENST00000488683 PREX2Q70Z35 1606 aa17.38■□□□□ 0.37
CLIC4-202ENST00000488683 SALL2Q9Y467 1007 aaPredicted RBP17.38■□□□□ 0.37
CLIC4-202ENST00000488683 UHRF1BP1Q6BDS2 1440 aa17.37■□□□□ 0.37
CLIC4-202ENST00000488683 ST20-MTHFSA0A0A6YYL1 179 aa17.37■□□□□ 0.37
CLIC4-202ENST00000488683 RALGAPBQ86X10 1494 aa17.36■□□□□ 0.37
CLIC4-202ENST00000488683 CCDC141Q6ZP82 1450 aa17.35■□□□□ 0.37
CLIC4-202ENST00000488683 TTC37Q6PGP7 1564 aa17.35■□□□□ 0.37
CLIC4-202ENST00000488683 ZBED9Q6R2W3 1325 aa17.34■□□□□ 0.37
CLIC4-202ENST00000488683 ARHGEF12Q9NZN5 1544 aa17.34■□□□□ 0.37
CLIC4-202ENST00000488683 ERCC6L2Q5T890 1561 aa17.34■□□□□ 0.37
CLIC4-202ENST00000488683 SYCP2Q9BX26 1530 aa17.33■□□□□ 0.37
CLIC4-202ENST00000488683 FAM135AQ9P2D6 1515 aa17.33■□□□□ 0.36
CLIC4-202ENST00000488683 MSH5O43196 834 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms